cluster # 5845

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Oryza sativa
cluster # 5845 cluster # 5845 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5845#0 length = 728 sequences # 3

consensusID : consensus_5845#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 728
fasta sequence

                              [TAATACAGTACTATACTACTCTTCTTCTTCCTTCCAACCTCCTCAACTCCAAACCAACACCTCCCCAATAAATCCATCCAACCCCATCACACAATCACCACCATCTTCTCCATCTCGTTTTGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGCCATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCTCTGCATCTCAGCTACTCATGA-GGCTGCGAGAACAGCATCAGGCCAACCGA-TCCAAGAACAAGAACAAGAACAGCATGGCAAGGTGGAGGAGGAGACGATGGCGGCGAGCTTCGCGGCGGTGGAAGAGCAG-TGTGGAGGGGAAGAA-GGAGAGGAGGAGGAGTGCTTGATGAGGAGGACGCTGGTGGCGCACACAGACTACATCTACACCCAGGGAAATCACAACTGATAGTTAGTACAATCTACTACTATATGGTAGCCTAGCTCATGCAGCAGCGAAAATTGGATGAATTTACAATTCGCTTTGATTTCTGTTTGCTCCAATCAGTTCACTTTCACTGTGACTGATTGATGTCATCTTATCTTATCCAATCATTAATTGCTGCTGCTGACTTCTCTCTGTATGATCAATGGATCAAAATGCGTGTCAACTTCAGGGTTTTTTTTCCAGATAATGTCTCCTCAGTTATATATAGTATATCATATCACAG]

[+] EMBL OSS3123A             [TAATACAGTACTATACTACTCTTCTTCTTCCTTCCAACCTCCTCAACTCCAAACCAACACCTCCCCAATAAATCCATCCAACCCCATCACACAATCACCACCATCTTCTCCATCTCGTTTTGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGCCATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCTCTGCATCTCAGCTACTCATGAGGGCTGCGAGAACAGCATCAGGCCAACCGATTCCAAGgaa                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK062316             [          CTATACTACTCTTCTTCTTCCTTCCAACCTCCTCAACTCCAAACCAACACCTCCCCAATAAATCCATCCAACCCCATCACACAATCACCACCATCTTCTCCATCTCGTTTTGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGCCATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCTCTGCATCTCAGCTACTCATGA GGCTGCGAGAACAGCATCAGGCCAACCGA TCCAAGAACAAGAACAAGAACAGCATGGCAAGGTGGAGGAGGAGACGATGGCGGCGAGCTTCGCGGCGGTGGAAGAGCAG TGTGGAGGGGAAGAA GGAGAGGAGGAGGAGTGCTTGATGAGGAGGACGCTGGTGGCGCACACAGACTACATCTACACCCAGGGAAATCACAACTGATAGTTAGTACAATCTACTACTATATGGTAGCCTAGCTCATGCAGCAGCGAAAATTGGATGAATTTACAATTCGCTTTGATTTCTGTTTGCTCCAATCAGTTCACTTTCACTGTGACTGATTGATGTCATCTTATCTTATCCAATCATTAATTGCTGCTGCTGACTTCTCTCTGTATGATCAATGGATCAAAATGCGTGTCAACTTCAGGGTTTTTTTTCCAGATAATGTCTCCTCAGTTATATATAGTATATCATATCACAG]
[+] EMBL OSC0041              [                                                                                                                       TTGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGCCATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCTCTGCATCTCAGCTACTCATGA GGCTGCGAGAACAGCATCAGGCCAACCGA TCCAAGAACAAGAACAAGAACAGCATGGCAAGGTGGAGGAGGAGACGATGGCGGCGAGCTTCGCGGCGGTGGAAGNGCAGTTTTNGAGGGGAAGAAGGGAGAGGAGG                                                                                                                                                                                                                                                                                                                                             ]




>consensus_5845#0
TAATACAGTACTATACTACTCTTCTTCTTCCTTCCAACCTCCTCAACTCCAAACCAACAC
CTCCCCAATAAATCCATCCAACCCCATCACACAATCACCACCATCTTCTCCATCTCGTTT
TGTCAAACCAAACCATACAATCAGAAGCAGCAGAAGCTAGCTAGATATAGCTACTCCAGC
CATGGCGCCGCCACGGTGCACCGCTCTACTGCTGCTGGCGTCTCTCCTCCTCTTCTTCCT
CTGCATCTCAGCTACTCATGAGGCTGCGAGAACAGCATCAGGCCAACCGATCCAAGAACA
AGAACAAGAACAGCATGGCAAGGTGGAGGAGGAGACGATGGCGGCGAGCTTCGCGGCGGT
GGAAGAGCAGTGTGGAGGGGAAGAAGGAGAGGAGGAGGAGTGCTTGATGAGGAGGACGCT
GGTGGCGCACACAGACTACATCTACACCCAGGGAAATCACAACTGATAGTTAGTACAATC
TACTACTATATGGTAGCCTAGCTCATGCAGCAGCGAAAATTGGATGAATTTACAATTCGC
TTTGATTTCTGTTTGCTCCAATCAGTTCACTTTCACTGTGACTGATTGATGTCATCTTAT
CTTATCCAATCATTAATTGCTGCTGCTGACTTCTCTCTGTATGATCAATGGATCAAAATG
CGTGTCAACTTCAGGGTTTTTTTTCCAGATAATGTCTCCTCAGTTATATATAGTATATCA
TATCACAG

clustalw multiple alignements is not computed in this case