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Oryza sativa
cluster # 5846 cluster # 5846       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5846#0 length = 874 sequences # 3  

consensusID : consensus_5846#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 874
fasta sequence
                              [CGAGTCCCTCGGACTCCAAGATCTTCACGCGACCAGGGAGACCGGGGAGTCACGTGGTTTTGCTTCGTCACCTTCTCCTCCGACCAGTCGATGCGCGACGCCATCGAGGCCATGAACGCCAAGGAGCTCGACGCCCGCAACATCACCGTCAACGAGCCCAGTCCCCCGCTCCGGCGCGCGCGGAGCGGGGGCTACGGCGGCGCGGTGCCGGCTACGGCGCGCGTTCGTGGAGGCGGCGGCTACGGAGGAGTGCGGCGGCGGCTACGGGCCCGTGAGGGCGGCTACGGTGGCGGCGGCGGCTACGGCGGCGGCCGTGGCGGCGGCGGCGGCTACGGTGGCAGCCGTGGCGGCGGCTACGGCGGCGACTCCGGCGGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGGCCAGTTATCCTTAGCTATCCGTGTCAGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGTTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGATGTTACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTGTTGCTATCTATCGGAATGAAATGAAATAGAAAAAAAAAAGAAAAAAAAGAGTTCGAAAAAAAAAAAAAAAACTCAAGACTAGTTCTCTCTCGATCTCCATTCGTTTTTGAGTTCCTCGTTTGCTCCGCCTCTCTTTCACTCATGGGCAAGATTAAGATCGGAATCAATGGGTTCGGCCGCATCGGCAGGNTGGTGGCCAGGGTGGCGCTGCAGAGCGAGGATGTNNNNANGTTGCCGTCAACGATCCNNTCATCACCNCCGAGTACATGACATACATGTTCAAGTAT]

[+] EMBL BI799113             [CGAGTCCCTCGGACTCCAAGATCTTCACGCGACCAGGGAGACCGGGGAGTCACGTGGTTTTGCTTCGTCACCTTCTCCTCCGACCAGTCGATGCGCGACGCCATCGAGGCCATGAACGCCAAGGAGCTCGACGCCCGCAACATCACCGTCAACGAGCCCAGTCCCCCGCTCCGGCGCGCGCGGAGCGGGGGCTACGGCGGCGCGGTGCCGGCTACGGCGCGCGTTCGTGGAGGCGGCGGCTACGGAGGAGTGCGGCGGCGGCTACGGGCCCGTGAGGGCGGCTACGGTGGCGGCGGCGGCTACGGCGGCGGCCGTGGCGGCGGCGGCGGCTACGGTGGCAGCCGTGGCGGCGGCTACGGCGGCGACTCCGGCGGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGGCCAGTTATCCTTAGCTATCCGTGTCAGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGTTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGATGTTACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTGTTGCTATCTATCGGAATGAAATGAAATAGAAAAAAAAAA                                                                                                                                                                                                                                                        ]
[+] EMBL CA756550             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCTTCGTCCGTGATGTTACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTGTTGCTATCTATCGGAATGAAATGAAATAGAAAACAAGGAGAAAAAAAAGAGTTCGAAAAAAAAAAAAAAAACTCAAGACTAGTTCTCTCTCGATCTCCATTCGTTTTTGAGTTCCTCGTTTGCTCCGCCTCTCTTTCACTCATGGGCAAGATTAAGATCGGAATCAATGGGTTCG                                                                                                                ]
[+] EMBL AU068535             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gcactntnCTCGATCTCCATTCGTTTTTGAGTTCNNCGTTTGCTCCGCCTCTCTTTCACTCATGGGCAAGATTAAGATCGGAATCAATGGGTTCGGCCGCATCGGCAGGNTGGTGGCCAGGGTGGCGCTGCAGAGCGAGGATGTNNNNANGTTGCCGTCAACGATCCNNTCATCACCNCCGAGTACATGACATACATGTTCAAGTAT]


>consensus_5846#0 CGAGTCCCTCGGACTCCAAGATCTTCACGCGACCAGGGAGACCGGGGAGTCACGTGGTTT TGCTTCGTCACCTTCTCCTCCGACCAGTCGATGCGCGACGCCATCGAGGCCATGAACGCC AAGGAGCTCGACGCCCGCAACATCACCGTCAACGAGCCCAGTCCCCCGCTCCGGCGCGCG CGGAGCGGGGGCTACGGCGGCGCGGTGCCGGCTACGGCGCGCGTTCGTGGAGGCGGCGGC TACGGAGGAGTGCGGCGGCGGCTACGGGCCCGTGAGGGCGGCTACGGTGGCGGCGGCGGC TACGGCGGCGGCCGTGGCGGCGGCGGCGGCTACGGTGGCAGCCGTGGCGGCGGCTACGGC GGCGACTCCGGCGGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGGCCAGTTATCCT TAGCTATCCGTGTCAGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGTT CTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGAT GTTACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTGTTGCTATCTATCG GAATGAAATGAAATAGAAAAAAAAAAGAAAAAAAAGAGTTCGAAAAAAAAAAAAAAAACT CAAGACTAGTTCTCTCTCGATCTCCATTCGTTTTTGAGTTCCTCGTTTGCTCCGCCTCTC TTTCACTCATGGGCAAGATTAAGATCGGAATCAATGGGTTCGGCCGCATCGGCAGGNTGG TGGCCAGGGTGGCGCTGCAGAGCGAGGATGTNNNNANGTTGCCGTCAACGATCCNNTCAT CACCNCCGAGTACATGACATACATGTTCAAGTAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)