cluster # 5854

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Oryza sativa
cluster # 5854 cluster # 5854 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5854#0 length = 1715 sequences # 3
consensusID : consensus_5854#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1715
fasta sequence
                              [CAAACCTTTACCAAACCCAACAACAACGACCAATCCACTCCACGTCTCCACCCCAGTTCCACCACCACCGCCGCCGCCGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGAGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTAAGCCGATCCTAAGGGACGGGGTAACCCCGGCAGAGAGCGCGACCACGCGCGTGCCCCGAAAGGGAATCGGGTTAAGATTTCCCGAGCCGGGACGTGGCGGTTGACGGCGACGTTAGGAAGGCCGGATCGTCGCTAGGTGTTCCGCGCCGCCATGTTGTACCCGGAGCGGCCGAGCCGCGTCAACGGGACGGCCACCGTCGACTGCTCGGCCTACCCGCTCGACTGCCACCCGGTCTGCCCAGGCGGCAGCTGCTACGAGATCGCCGAGCCCCCGCCGCCGTCGCCGGTGGTCCCGCGCGTCGACGTGGCCGTCGACGACCACCACCTCCCCGTACGCCTCCTCCTCACCGTCTCACTCCTCTCCGCCTTCCTGTTCATCTC-GCTCTCTGTCTCCACGATCCTGCTCTACCGCCGCCGCGTCGTCCTGCGCCGCCGGCGCCGGGCCGCGACCGCGCCGCTCCCCGGCGACGACGGGTACGGCGACGGGGATGAGGAGGCGGGGGGCGGCGGCGGGGATGTGCACCACGTGTGGTACATCCGCACGGTGGGGCTGGACGAGGCCACCATCACGTCCATAGCCACCGCGGAGTACCGCGCCGGAGTTGGGTGGGGAGGGGACTGCGCGGTGTGCCTCGGCGAGTTCCGCGACGGGGAGTTGGTCCGCCTCCTCCCGCGCTGCTCGCATCCGTTCCATGCGCCTTGCATCGACACCTGGCTCCGCGCACACGTCAACTGCCCGCTCTGCAGATCCCCAGTCGTCGTTCCCTCCGATCTCCCCGCCACGGCTACCGAAGGTGAGGCGGAGGGTGGTGGGCAAGCGGAAGAGCACCAGGTGTTTGATGAAATCTCGCTATCGGAATCACGTGCCGATGTCTCCGAGGATTCTGACACCTCTTCGGACACTCAAAGTGAGGACACAGCAGCTTCACCAGAGGATGGTGGGAGGGTGATGCCCAAGCCAATACGGCGCTCGGCGTCCATGGACTCACCGTTATTCCTGGTGGTTGTGCCTGAAGCGCAGGACGATGCCATGCGGGGTGATCGAAAATTTCCGAATGGTCAAGAGATGAAGTTATTCAGCGTGAAAGAGAAGGATGCAACAGGGACGTCTTCTTCCTCTTGTCAGGCAGGGCGGTTTGGGATTGGCAGATCGATGTCGAGCAGTGGGCAGGGGTTCTTCTTCTCACGGAATGGGCGCTCCAGTAGTGCTGTGTTACCACTGTGAGTTGGCATGATTTTGCTGTCAAAGGGAGTTGCAGCCTCAGCAAAGCTGGGAGCTGGTAGTGTGTCATGTCTTTTGATAGAAAGCGTATACCAGATAACCAGAGAGCTGAAGTAGCTCTTGGAGAAAATCTCCTTCTGAGACAAATGAGTTGACAATTGTAACTGTGGAGGTGATAAGTACTTCTTGAGTTGATGAGCTCGTGTAAATTTGTACCTCCCAGGTTGCCTGTATCATAGTTTTGAGCTTGGGATCTAGTGAATTTGAAGGAACAAAAAAAA]

[+] EMBL AK064102             [CAAACCTTTACCAAACCCAACAACAACGACCAATCCACTCCACGTCTCCACCCCAGTTCCACCACCACCGCCGCCGCCGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGAGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTAAGCCGATCCTAAGGGACGGGGTAACCCCGGCAGAGAGCGCGACCACGCGCGTGCCCCGAAAGGGAATCGGGTTAAGATTTCCCGAGCCGGGACGTGGCGGTTGACGGCGACGTTAGGAAGGCCGGATCGTCGCTAGGTGTTCCGCGCCGCCATGTTGTACCCGGAGCGGCCGAGCCGCGTCAACGGGACGGCCACCGTCGACTGCTCGGCCTACCCGCTCGACTGCCACCCGGTCTGCCCAGGCGGCAGCTGCTACGAGATCGCCGAGCCCCCGCCGCCGTCGCCGGTGGTCCCGCGCGTCGACGTGGCCGTCGACGACCACCACCTCCCCGTACGCCTCCTCCTCACCGTCTCACTCCTCTCCGCCTTCCTGTTCATCTC GCTCTCTGTCTCCACGATCCTGCTCTACCGCCGCCGCGTCGTCCTGCGCCGCCGGCGCCGGGCCGCGACCGCGCCGCTCCCCGGCGACGACGGGTACGGCGACGGGGATGAGGAGGCGGGGGGCGGCGGCGGGGATGTGCACCACGTGTGGTACATCCGCACGGTGGGGCTGGACGAGGCCACCATCACGTCCATAGCCACCGCGGAGTACCGCGCCGGAGTTGGGTGGGGAGGGGACTGCGCGGTGTGCCTCGGCGAGTTCCGCGACGGGGAGTTGGTCCGCCTCCTCCCGCGCTGCTCGCATCCGTTCCATGCGCCTTGCATCGACACCTGGCTCCGCGCACACGTCAACTGCCCGCTCTGCAGATCCCCAGTCGTCGTTCCCTCCGATCTCCCCGCCACGGCTACCGAAGGTGAGGCGGAGGGTGGTGGGCAAGCGGAAGAGCACCAGGTGTTTGATGAAATCTCGCTATCGGAATCACGTGCCGATGTCTCCGAGGATTCTGACACCTCTTCGGACACTCAAAGTGAGGACACAGCAGCTTCACCAGAGGATGGTGGGAGGGTGATGCCCAAGCCAATACGGCGCTCGGCGTCCATGGACTCACCGTTATTCCTGGTGGTTGTGCCTGAAGCGCAGGACGATGCCATGCGGGGTGATCGAAAATTTCCGAATGGTCAAGAGATGAAGTTATTCAGCGTGAAAGAGAAGGATGCAACAGGGACGTCTTCTTCCTCTTGTCAGGCAGGGCGGTTTGGGATTGGCAGATCGATGTCGAGCAGTGGGCAGGGGTTCTTCTTCTCACGGAATGGGCGCTCCAGTAGTGCTGTGTTACCACTGTGAGTTGGCATGATTTTGCTGTCAAAGGGAGTTGCAGCCTCAGCAAAGCTGGGAGCTGGTAGTGTGTCATGTCTTTTGATAGAAAGCGTATACCAGATAACCAGAGAGCTGAAGTAGCTCTTGGAGAAAATCTCCTTCTGAGACAAATGAGTTGACAATTGTAACTGTGGAGGTGATAAGTACTTCTTGAGTTGATGAGCTCGTGTAAATTTGTACCTCCCAGGTTGCCTGTATCATAGTTTTGAGCTTGGGATCTAGTGAATTTGAAG            ]
[+] EMBL AU172633             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCGTCGACGACCACCACCTCCCCGTACGCCTCCTCCTCACCGTCTCACTCCTCTCCGCCTTCCTGTTCATCTCAGCTCTCTGTCTCCACGATCCTGCTCTACCGCCGCCGCGTCGTCCTGCGCCGCCGGCGCCGGGCCNNGACCGCGCCGNTCCCCGGCGACGACGGGTTCGGCGACGGGGATGAGGAGGCGGGGGGCGGCGGCGGGGATGTGCACCACGTGTGGTACATCCGCACGGTGGGGCTGGACGAGGCCACCATCACGTCCATAGCCACCGCGGAGTACCGCGCCGGAGTTGGGTGGGGAGGGGACTGCGCGGTGTGCCTCGGCGAGTTCCGCGACGGGGAGTTGGTCCGCCTCCTCCCGCGCTGCTCGCATCCGTTCCATGCGCCTTGCATCGACACCTGGCTCCGGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU172634             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAAAGAGAAGGATGCAACAGGGACGTCTTCTTCCTCTTGTCAGGCAGGGCGGTTTGGGATTGGCAGATCGATGTCGAGCAGTGGGCAGGGGTTCTTCTTCTCACGGAATGGGCGCTCCAGTAGTGCTGTGTTACCACTGTGAGTTGGCATGATTTTGCTGTCAAAGGGAGTTGCAGCCTCAGCAAAGCTGGGAGCTGGTAGTGTGTCATGTCTTTTGATAGAAAGCGTATACCAGATAACCAGAGAGCTGAAGTAGCTCTTGGAGAAAATCTCCTTCTGAGACAAATGAGTTGACAATTGTAACTGTGGAGGTGATAAGTACTTCTTGAGTTGATGAGCTCGTGTAAATTTGTACCTCCCAGGTTGCCTGTATCATAGTTTTGAGCTTGGGATCTAGTGAATTTGAAGGAACAAAAAAAA]




>consensus_5854#0
CAAACCTTTACCAAACCCAACAACAACGACCAATCCACTCCACGTCTCCACCCCAGTTCC
ACCACCACCGCCGCCGCCGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTG
CAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGAGAAA
GGTTCCATGTGAACGGCACTTGCACATGGGTAAGCCGATCCTAAGGGACGGGGTAACCCC
GGCAGAGAGCGCGACCACGCGCGTGCCCCGAAAGGGAATCGGGTTAAGATTTCCCGAGCC
GGGACGTGGCGGTTGACGGCGACGTTAGGAAGGCCGGATCGTCGCTAGGTGTTCCGCGCC
GCCATGTTGTACCCGGAGCGGCCGAGCCGCGTCAACGGGACGGCCACCGTCGACTGCTCG
GCCTACCCGCTCGACTGCCACCCGGTCTGCCCAGGCGGCAGCTGCTACGAGATCGCCGAG
CCCCCGCCGCCGTCGCCGGTGGTCCCGCGCGTCGACGTGGCCGTCGACGACCACCACCTC
CCCGTACGCCTCCTCCTCACCGTCTCACTCCTCTCCGCCTTCCTGTTCATCTCGCTCTCT
GTCTCCACGATCCTGCTCTACCGCCGCCGCGTCGTCCTGCGCCGCCGGCGCCGGGCCGCG
ACCGCGCCGCTCCCCGGCGACGACGGGTACGGCGACGGGGATGAGGAGGCGGGGGGCGGC
GGCGGGGATGTGCACCACGTGTGGTACATCCGCACGGTGGGGCTGGACGAGGCCACCATC
ACGTCCATAGCCACCGCGGAGTACCGCGCCGGAGTTGGGTGGGGAGGGGACTGCGCGGTG
TGCCTCGGCGAGTTCCGCGACGGGGAGTTGGTCCGCCTCCTCCCGCGCTGCTCGCATCCG
TTCCATGCGCCTTGCATCGACACCTGGCTCCGCGCACACGTCAACTGCCCGCTCTGCAGA
TCCCCAGTCGTCGTTCCCTCCGATCTCCCCGCCACGGCTACCGAAGGTGAGGCGGAGGGT
GGTGGGCAAGCGGAAGAGCACCAGGTGTTTGATGAAATCTCGCTATCGGAATCACGTGCC
GATGTCTCCGAGGATTCTGACACCTCTTCGGACACTCAAAGTGAGGACACAGCAGCTTCA
CCAGAGGATGGTGGGAGGGTGATGCCCAAGCCAATACGGCGCTCGGCGTCCATGGACTCA
CCGTTATTCCTGGTGGTTGTGCCTGAAGCGCAGGACGATGCCATGCGGGGTGATCGAAAA
TTTCCGAATGGTCAAGAGATGAAGTTATTCAGCGTGAAAGAGAAGGATGCAACAGGGACG
TCTTCTTCCTCTTGTCAGGCAGGGCGGTTTGGGATTGGCAGATCGATGTCGAGCAGTGGG
CAGGGGTTCTTCTTCTCACGGAATGGGCGCTCCAGTAGTGCTGTGTTACCACTGTGAGTT
GGCATGATTTTGCTGTCAAAGGGAGTTGCAGCCTCAGCAAAGCTGGGAGCTGGTAGTGTG
TCATGTCTTTTGATAGAAAGCGTATACCAGATAACCAGAGAGCTGAAGTAGCTCTTGGAG
AAAATCTCCTTCTGAGACAAATGAGTTGACAATTGTAACTGTGGAGGTGATAAGTACTTC
TTGAGTTGATGAGCTCGTGTAAATTTGTACCTCCCAGGTTGCCTGTATCATAGTTTTGAG
CTTGGGATCTAGTGAATTTGAAGGAACAAAAAAAA
clustalw multiple alignements is not computed in this case