cluster # 5892

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Oryza sativa
cluster # 5892 cluster # 5892 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5892#0 length = 1899 sequences # 3
consensusID : consensus_5892#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1899
fasta sequence
                              [GCTGGCTGAAGGCTGTGAGAGTGTGAGGTCTAGCTGTGCAATGTGCAGGTGCAGCCATCGCTGCTGCTGCTGCTGCTCTGCTCTTTTCATGTTGACACTTCGCTAAACCCCTCCCAAAACCTCCTCCCCCCCCCCCCCCCCCGATGCGTTCTTGGCCAGGGTCGGGAGCGAGGCGTTCTTGATTTTTTTCTTCTTCTGTTTTTGTTCTTGATTGATTGGATTGGGGAGTGATTCGGTTTGTTCTTGATTTTGATTTTTTGTTGTTGTTGTTGTTGTTTGGGGAGAAAGAGACGAAGGGGAAGCTGTGATTTTCTCTTCCTTTCCACCGAGAGAAAATTTTTTGATCTGTTTGTTGTTTCTTGGAATCGGTTTTGGTTCAAGAACAGGCGCCGCCTTTTGTTCCGGGAAATTCGCTTGTGATCCTCCGAAACCCAGAATTTCTTTTTTCGATCCGTTTTGATCGATTGAAAGCAAATATCATCTTGAAAAGGATCGTTCTTGCTGGTGTTGGTTTGGGGAGGAGGGGGAGGTTTTCCCTCTGACGAGCAAGCAAAGCATTTGGGGCCGCCTGTCGATGACTGAGGGTTTGATCCGATGCTGTCGGGGTGCACGGTGTCCAGTCTCGCGGCGAGGTTCGCCTTCTTCCCGCCGGAGCCGGCGACCTACGCCGTCAGGAAGGATGAGGCGTGCGGCGGCGGAGGGCGGCTGGTGGCGTCGGGCGTCCCGCGGGACGCCGCCGTGGACGTGCTGCTGGTGGACACCAGGAAGGGGAGCAAGGTGGTGGCCTTCTACCTGAGGAACCCCGCCGCCCGCCTCACCGTGCTCTACTCGCACGGCAACGCCGCCGACCTCGGCCAGCTCTACGACCTCTTCGTGCAGCTCAAGGTCAATCTCAAGGTCAATCTGATGGGATATGACTACTCTGGGTATGGAGCATCTACTGGCAAGCCAAGTGAAGAGAATACATATGCAGACATTGAGGCAGTTTACCAGTGCTTAGAAACAGAGTATGGAATCAGTCAGGAAGACCTTATCTTGTATGGACAATCTGTTGGCAGTGGACCTACATTGCATTTAGCTTCCCGTTTACCAAGATTGCGTGGCGTGGTTCTTCATAGCGCTATACTGTCAGGCCTCCGAGTTGTTTGCCATGTGAACTTTACTTTCTGCTTTGACATCTACAAAAATGTGAAGAAAATCAAAAAGGTTAAATCCCCAGTGCTTGTTATTCATGGAACTGATGATGATGTCGTGAACTGGTCGCATGGTAACGAGCTGTGGAAACTGGCGAGGGAGCCTTACGATCCGCTATGGATCAAAGGAGGAGGCCATTGCAACCTGGAGCTGTACCCGGACTTCATCCGCCACCTCTCCAAGTTCATCCGCGAGATGGAGAACATCACAACGAAGACAAGGCTTAAGAAGATCCGGCAGTCCCTGCAACCCGCACCTAAGAAGGTCCACCACCGGGCGAGCACCGGGACGACCACCACCTTCACCACCAACTGCTGCTGCCGCATCCGGGTCCGCAAACCGAGTTGCCGTTGCCCTGGCTGCAACCTAAGCTGCGGCTGCTGCTCTGGTCTGATGAGTTGCTTCTCATCCCGGCTGTTCAAGTGCTCAACCTGCTTCTCCTCCTGCAGCTGCAGGGGATGCTTCAAGTGCCCAACCTGCTTCTCCTTCTCCTGCAGCTGCTGCAGGAGCTGCCTCAAGTGCCCAACCTTCAAATGCTGCTGCTGCGGTTCATGCAGAGATGAGCAATAATGCAAATCTCTATGTGCTTGTGTATAGGAAAAAGAGTGGTTCCGATATATCTGACAAGTTTAATTCTGTAGAAACTAGACCTTGGTTCTCTTAGCTAAACAAACCATAGCAAGATAAAGATGCTTCTCCTTTTCA]

[+] EMBL AK060630             [GCTGGCTGAAGGCTGTGAGAGTGTGAGGTCTAGCTGTGCAATGTGCAGGTGCAGCCATCGCTGCTGCTGCTGCTGCTCTGCTCTTTTCATGTTGACACTTCGCTAAACCCCTCCCAAAACCTCCTCCCCCCCCCCCCCCCCCGATGCGTTCTTGGCCAGGGTCGGGAGCGAGGCGTTCTTGATTTTTTTCTTCTTCTGTTTTTGTTCTTGATTGATTGGATTGGGGAGTGATTCGGTTTGTTCTTGATTTTGATTTTTTGTTGTTGTTGTTGTTGTTTGGGGAGAAAGAGACGAAGGGGAAGCTGTGATTTTCTCTTCCTTTCCACCGAGAGAAAATTTTTTGATCTGTTTGTTGTTTCTTGGAATCGGTTTTGGTTCAAGAACAGGCGCCGCCTTTTGTTCCGGGAAATTCGCTTGTGATCCTCCGAAACCCAGAATTTCTTTTTTCGATCCGTTTTGATCGATTGAAAGCAAATATCATCTTGAAAAGGATCGTTCTTGCTGGTGTTGGTTTGGGGAGGAGGGGGAGGTTTTCCCTCTGACGAGCAAGCAAAGCATTTGGGGCCGCCTGTCGATGACTGAGGGTTTGATCCGATGCTGTCGGGGTGCACGGTGTCCAGTCTCGCGGCGAGGTTCGCCTTCTTCCCGCCGGAGCCGGCGACCTACGCCGTCAGGAAGGATGAGGCGTGCGGCGGCGGAGGGCGGCTGGTGGCGTCGGGCGTCCCGCGGGACGCCGCCGTGGACGTGCTGCTGGTGGACACCAGGAAGGGGAGCAAGGTGGTGGCCTTCTACCTGAGGAACCCCGCCGCCCGCCTCACCGTGCTCTACTCGCACGGCAACGCCGCCGACCTCGGCCAGCTCTACGACCTCTTCGTGCAGCTCAAGGTCAATCTCAAGGTCAATCTGATGGGATATGACTACTCTGGGTATGGAGCATCTACTGGCAAGCCAAGTGAAGAGAATACATATGCAGACATTGAGGCAGTTTACCAGTGCTTAGAAACAGAGTATGGAATCAGTCAGGAAGACCTTATCTTGTATGGACAATCTGTTGGCAGTGGACCTACATTGCATTTAGCTTCCCGTTTACCAAGATTGCGTGGCGTGGTTCTTCATAGCGCTATACTGTCAGGCCTCCGAGTTGTTTGCCATGTGAACTTTACTTTCTGCTTTGACATCTACAAAAATGTGAAGAAAATCAAAAAGGTTAAATCCCCAGTGCTTGTTATTCATGGAACTGATGATGATGTCGTGAACTGGTCGCATGGTAACGAGCTGTGGAAACTGGCGAGGGAGCCTTACGATCCGCTATGGATCAAAGGAGGAGGCCATTGCAACCTGGAGCTGTACCCGGACTTCATCCGCCACCTCTCCAAGTTCATCCGCGAGATGGAGAACATCACAACGAAGACAAGGCTTAAGAAGATCCGGCAGTCCCTGCAACCCGCACCTAAGAAGGTCCACCACCGGGCGAGCACCGGGACGACCACCACCTTCACCACCAACTGCTGCTGCCGCATCCGGGTCCGCAAACCGAGTTGCCGTTGCCCTGGCTGCAACCTAAGCTGCGGCTGCTGCTCTGGTCTGATGAGTTGCTTCTCATCCCGGCTGTTCAAGTGCTCAACCTGCTTCTCCTCCTGCAGCTGCAGGGGATGCTTCAAGTGCCCAACCTGCTTCTCCTTCTCCTGCAGCTGCTGCAGGAGCTGCCTCAAGTGCCCAACCTTCAAATGCTGCTGCTGCGGTTCATGCAGAGATGAGCAATAATGCAAATCTCTATGTGCTTGTGTATAGGAAAAAGAGTGGTTCCGATATATCTGACAAGTTTAATTCTGTAGAAACTAGACCTTGGTTCTCTTAGCTAAACAAACC                              ]
[+] EMBL AA752380             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cgagCCAAGATTGCGTGGCGTGGTTCTTCATAGCGCTATACTGTCAGGCCTCCGAGTTGTTTGCCATGTGAACTTTACTTTCTGCTTTGACATCTACAAAAATGTGAAGAAAATCAAAAAGGTTAAATCCCCAGTGCTTGTTATTCATGGAACTGATGATGATGTCGTGAACTGGTCGCATGGTAACGAGCTGTGGAAACTGGCGAGGGAGCCTTACGATCCGCTATGGATCAAAGGAGGAGGCCATTGCAACCTGGAGCTGTACVCGGACTTCATCCGGVAMCTCTCCAAGTTCATCCGCSAGATGGAGAACATCACAACCGAGACAAGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C73606               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGATCCGGCAGTCCCTGCAACCCGCACCTAAGAAGGTCCACCACCGGGCGAGCACCGGGACGACCACCACCTTCACCACCAACTGCTGCTGCCGCATCCGGGTCCGCAAACCGAGTTGCCGTTGCCCTGGCTGCAACCTAAGCTGCGGCTGCTGCTCTGGTCTGATGAGTTGCTTCTCATCCCGGCTGTTCAAGTGCTCAACCTGCTTCTCCTCCTGCAGCTGCAGGGGATGCTTCAAGTGCCCAACCTGCTTCTCCTTCTCCTGCAGCTGCTGCAGGAGCTGCCTCAAGTGCCCAACCTTCAAATGCTGCTGCTGCGGTTCATGCAGAGATGAGCAATAATGCAAATCTCTATGTGCTTGTGTATAGGAAAAAGAGTGGTTCCGATATATCTGACAAGTTTAATTCTGTAGAAACTAGACCTTGGTTCTCTTAGCTAAACAAACCATAGCAAGATAAAGATGCTTCTCCTTTTCA]




>consensus_5892#0
GCTGGCTGAAGGCTGTGAGAGTGTGAGGTCTAGCTGTGCAATGTGCAGGTGCAGCCATCG
CTGCTGCTGCTGCTGCTCTGCTCTTTTCATGTTGACACTTCGCTAAACCCCTCCCAAAAC
CTCCTCCCCCCCCCCCCCCCCCGATGCGTTCTTGGCCAGGGTCGGGAGCGAGGCGTTCTT
GATTTTTTTCTTCTTCTGTTTTTGTTCTTGATTGATTGGATTGGGGAGTGATTCGGTTTG
TTCTTGATTTTGATTTTTTGTTGTTGTTGTTGTTGTTTGGGGAGAAAGAGACGAAGGGGA
AGCTGTGATTTTCTCTTCCTTTCCACCGAGAGAAAATTTTTTGATCTGTTTGTTGTTTCT
TGGAATCGGTTTTGGTTCAAGAACAGGCGCCGCCTTTTGTTCCGGGAAATTCGCTTGTGA
TCCTCCGAAACCCAGAATTTCTTTTTTCGATCCGTTTTGATCGATTGAAAGCAAATATCA
TCTTGAAAAGGATCGTTCTTGCTGGTGTTGGTTTGGGGAGGAGGGGGAGGTTTTCCCTCT
GACGAGCAAGCAAAGCATTTGGGGCCGCCTGTCGATGACTGAGGGTTTGATCCGATGCTG
TCGGGGTGCACGGTGTCCAGTCTCGCGGCGAGGTTCGCCTTCTTCCCGCCGGAGCCGGCG
ACCTACGCCGTCAGGAAGGATGAGGCGTGCGGCGGCGGAGGGCGGCTGGTGGCGTCGGGC
GTCCCGCGGGACGCCGCCGTGGACGTGCTGCTGGTGGACACCAGGAAGGGGAGCAAGGTG
GTGGCCTTCTACCTGAGGAACCCCGCCGCCCGCCTCACCGTGCTCTACTCGCACGGCAAC
GCCGCCGACCTCGGCCAGCTCTACGACCTCTTCGTGCAGCTCAAGGTCAATCTCAAGGTC
AATCTGATGGGATATGACTACTCTGGGTATGGAGCATCTACTGGCAAGCCAAGTGAAGAG
AATACATATGCAGACATTGAGGCAGTTTACCAGTGCTTAGAAACAGAGTATGGAATCAGT
CAGGAAGACCTTATCTTGTATGGACAATCTGTTGGCAGTGGACCTACATTGCATTTAGCT
TCCCGTTTACCAAGATTGCGTGGCGTGGTTCTTCATAGCGCTATACTGTCAGGCCTCCGA
GTTGTTTGCCATGTGAACTTTACTTTCTGCTTTGACATCTACAAAAATGTGAAGAAAATC
AAAAAGGTTAAATCCCCAGTGCTTGTTATTCATGGAACTGATGATGATGTCGTGAACTGG
TCGCATGGTAACGAGCTGTGGAAACTGGCGAGGGAGCCTTACGATCCGCTATGGATCAAA
GGAGGAGGCCATTGCAACCTGGAGCTGTACCCGGACTTCATCCGCCACCTCTCCAAGTTC
ATCCGCGAGATGGAGAACATCACAACGAAGACAAGGCTTAAGAAGATCCGGCAGTCCCTG
CAACCCGCACCTAAGAAGGTCCACCACCGGGCGAGCACCGGGACGACCACCACCTTCACC
ACCAACTGCTGCTGCCGCATCCGGGTCCGCAAACCGAGTTGCCGTTGCCCTGGCTGCAAC
CTAAGCTGCGGCTGCTGCTCTGGTCTGATGAGTTGCTTCTCATCCCGGCTGTTCAAGTGC
TCAACCTGCTTCTCCTCCTGCAGCTGCAGGGGATGCTTCAAGTGCCCAACCTGCTTCTCC
TTCTCCTGCAGCTGCTGCAGGAGCTGCCTCAAGTGCCCAACCTTCAAATGCTGCTGCTGC
GGTTCATGCAGAGATGAGCAATAATGCAAATCTCTATGTGCTTGTGTATAGGAAAAAGAG
TGGTTCCGATATATCTGACAAGTTTAATTCTGTAGAAACTAGACCTTGGTTCTCTTAGCT
AAACAAACCATAGCAAGATAAAGATGCTTCTCCTTTTCA
clustalw multiple alignements is not computed in this case