cluster # 5901

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Oryza sativa
cluster # 5901 cluster # 5901 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5901#0 length = 679 sequences # 3

consensusID : consensus_5901#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 679
fasta sequence

                              [GGTGCCCTTCCTCGAGTTAGTAAGGTCGGGGTCTGTCTACCGTGAGTACCCTGATCTTCCCGGGTACTATGATGGCAGGTACTGGACCATGTGGAACTGCCCATGTTCGGATGCATCTCGATNCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCATATCCAGAGTGCATTTGTTCGCATCATCGGNTTCGACAACGTCAGGCAGGTGCAGTTGAGTTAGTTTCATC-GCCTACAAGCCCCC-GGGTTGCGAGGAGTCCGGCGGAAACTAAGCTAGTTGGCAAGCC-AGCAAGC-TCACTCGTGAGCTC-TATACA-GAGGAGACTCGATTGATCTATTCGGTTTTGGCAGCTTTGAACGTTCGAATCGGGCCCCCTT-GCATTGGTTTCCCCT-TTCCCTGTTTGTTGCTTCCGTGTTTTTTTTTTTCAGCTTGTTTGTGTCAACATCAGCTGTGTATGTATGTACATATGTATGTATCAACATAGGTTGAAGAGCATGCATATGTGAATGCTAGCACCAGGCTAATCATATGCACATACACATCGTAATAAATATATTGTACNAATCGTC-CAAAACGATACTTATATGTAATACTATACTCAGACCCAACTT-GATA---AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCNCNAAAAAAAANAAAAAAAAAA]

[+] EMBL BM418734             [GGTGCCCTTCCTCGAGTTAGTAAGGTCGGGGTCTGTCTACCGTGAGTACCCTGATCTTCCCGGGTACTATGATGGCAGGTACTGGACCATGTGGAACTGCCCATGTTCGGATGCATCTCGATNCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCATATCCAGAGTGCATTTGTTCGCATCATCGGNTTCGACAACGTCAGGCAGGTGCAGTTGAGTTAGTTTCATC GCCTACAAGCCCCC GGGTTGCGAGGAGTCCGGCGGAAACTAAGCTAGTTGGCAAGCC AGCAAGC TCACTCGTGAGCTC TATACA GAGGAGACTCGATTGATCTATTCGGTTTTGGCAGCTTTGAACGTTCGAATCGGGCCCCCTT GCATTGGTTTCCCCT TTCCCTGTTTGTTGCTTCCGTGTTTTTTTTTTTCAGCTTGTTTGTGTCAACATCAGCTGTGTATGTATGTACATATGTATGTATCAACATAGGTTGAAGAGCATGCATATGTGAATGCTAGCACCAGGCTAATCATATGCACATACACATCGTAATAAATATATTGTACNAATCGTC CAAAACGATACTTATATGTAAaaaaaaaa                                                                                  ]
[+] EMBL BI809501             [                                                                                                                                                                                                                                TTAGTTTCATCGGCCTACAAGCCCCCTGGGTTGCGAGGAGTCCGGCGGAAACTAAGCTAGTTGGCAAGCCAAGCAAGCGTCACTCGTGAGCTCGTATACACGAGGAGACTCGATTGATCTATTCGGTTTTGGCAGCTTTGAACGTTCGAATCGGGCCCCCTTGGCATTGGTTTCCCCTGTTCCCTGTTTGTTGCTTCCGTTTTTTTTTTTTTCAGCTTGTTTGTGTCAACATCAGCTGTGTATGTATGTACATATGTATGTATCAACATAGGTTGAAGAGCATGCATATGTGAAT CTAGCACCA GCTAATCATATGCACATACACATCGTAATAAATATATTGTACAAATCGTCAAAAAACGATACTTATATGTAATACTATACTCAGACCCAACTT GATA   AAAAAAAAA                                                    ]
[+] EMBL BM419251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgATCAACATAGGTTGAAGAGCATGCATATGTGAATGCTAGCCCCAGGCTAATCATATGCACATACACATCGTAATAAATATATTGTACNAATCGTC CAAAACGATACTTATATGTAATACTATACTCAGACCCAACTTNTATACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCNCNAAAAAAAANAAAAAAAAAA]




>consensus_5901#0
GGTGCCCTTCCTCGAGTTAGTAAGGTCGGGGTCTGTCTACCGTGAGTACCCTGATCTTCC
CGGGTACTATGATGGCAGGTACTGGACCATGTGGAACTGCCCATGTTCGGATGCATCTCG
ATNCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAAGAAGGCATATCCAGAGTGCATTT
GTTCGCATCATCGGNTTCGACAACGTCAGGCAGGTGCAGTTGAGTTAGTTTCATCGCCTA
CAAGCCCCCGGGTTGCGAGGAGTCCGGCGGAAACTAAGCTAGTTGGCAAGCCAGCAAGCT
CACTCGTGAGCTCTATACAGAGGAGACTCGATTGATCTATTCGGTTTTGGCAGCTTTGAA
CGTTCGAATCGGGCCCCCTTGCATTGGTTTCCCCTTTCCCTGTTTGTTGCTTCCGTGTTT
TTTTTTTTCAGCTTGTTTGTGTCAACATCAGCTGTGTATGTATGTACATATGTATGTATC
AACATAGGTTGAAGAGCATGCATATGTGAATGCTAGCACCAGGCTAATCATATGCACATA
CACATCGTAATAAATATATTGTACNAATCGTCCAAAACGATACTTATATGTAATACTATA
CTCAGACCCAACTTGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCNCN
AAAAAAAANAAAAAAAAAA

clustalw multiple alignements is not computed in this case