cluster # 5919

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Oryza sativa
cluster # 5919 cluster # 5919 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5919#0 length = 1920 sequences # 3
consensusID : consensus_5919#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1920
fasta sequence
                              [ATCGCCCCAAACCCCCCTCTCCTCGCCTCTCTTCCTCCTCTCGCCAAATGATGAAGTCCCTCTTCCTCTTTTCCGCCCACCCCAAGCCGCCTCCTCTCCCCCCATCCCCCCACCTCCGCAAGCTCCTCCGGCTCACCGCCTCCGCCTCCACATCCGCCTCCTCCCCGCCCCGCGCCGGCTGCTCTCGGGGCCCCGCCCATGCCAGGCCCCGGCCCAGCCCCCGCCCCTCCCCCTCCTCCTCCCTCTACGCGCGCCCCAGCCTCCTCGACATGGAGCGCGGCCGCGCCGCCCGCCGCGCCGACGTCGACGCGTTCCTCGCCTCGCTCGGCGTCGACCCGGGCGAGCTCGCCGGCCTCGAGCTCCCCGCCACCGTCGACGTCATGCGCGAGCGCGTCGAGTTCCTGCACTCCCTCGACCTCTCCAACGAGGACCTCGCCGCGTACCCGCTCGCGCTGGGCTGCAGCGTCCGCAAGAACATGGTCCCCGTCCTCGACTACCTCGGCAAGCTCGGCGTCCGCCAGGACGCGCTCCCGGACCTGCTCCGCCGCTACCCGCAGGTGCTCCACGCCAGCGTCGTCGTCGACCTCGCCCCCGTTGTCAAGTACCTCCAGGGCATGGACGTCAGGCCGCACGACGTGCCGCGGGTGCTCGAGCGCTACCCCGAGCTCCTCGGCTTCAAGCTCGAGGGTACCATGAGCACCTCTATCGCCTACCTCGTCGGCATTGGCGTGGCAAGGCGGCAGGTTGGCAGCGTCATCACCCGTTTCCCAGAGGTGCTGGGCATGCGGGTGGGTAAGATCATTAAGCCTTTCGTCGAACACCTTGAGGGCATTGGGTTGCAGAGGCTAGCTATTGCAAGAATCATCGAGAAGAAGCCATATGTTCTTGGTTTTGGGTTGGAGGACAAGGTGAAGCCTAATATTGAGGCGCTTCTGGAATTTGGGGTGAGGAAGGAGGCATTAGCATTCATTGTGGCACAATACCCAGACATTCTTGGAATTGAGCTGAGAGACAAGCTTGCTACACAACAGAGCTTGTTTGAGTCTAGCATTTTGGTCAGCAGTGAAGATTTTGGTAGAGTGATAGAGAGGATGCCACAAGCCATTAGCCTTGGCCGAACTGCAGTTCTAAAGCATGTTAATTTCCTTACATCTTGTGGCTTCTTGCTCTCTCAGGTCAGCAAGATGGTCGTAGCATGCCCACAGCTGCTCGCATTGAACATGGATATAATGAAGATGAGCTTTGAGTACTTCCAGAATGAGATGGAGAGGGATTTGGAGGAGCTGGTTGAATTCCCTGCATTCTTTACATATGGCCTTGAGTCGACTGTAAGGCCACGGCA-TGAGATGGTGGCGAAGAAGGGATTCACATGCTCTCTTGCATGGCTTCTAAACTGTTCTGATGCCAAATTCGATGAGCGCATGAAATATGATACGATTGGCATCGAGGAAATGGAAGTTGATAACTCTTTTGACACGAACACTTTGTCGGAGCGAGTAGAGGATGAGGTGGAAGATGAAGATCTGGATGAGGATAGTGATTATGACAGCACCGATGATGAGTTTATTGAGTAACATGCTTCAAGTATCAACTGTTTGCTGACGAACTTGCATGTAGGTCTTCAGCTTGATGCTCTGTTGTACATGATATGATGCAGTCATGC-GGTCACTAGGTGGTTGTTTTTGAAGGATTGGCTTGATCAACAAATGCTGGATATATAAAATTGTAGCTTAGAGGTCCAATGCATTCAGATATCCTTGATCTGTGTAGTGCTGTATTGCTCATATTTGTTACTGACAAGTTGGCATTTCCATTTAGAAACATATTTTTGAGAAAAAATACCTCGTGTGGACAGTTCATATTTCCTGAATACGAAACTTCATTTTAACCTGGTTCTGGCCAGTGCANAAAAAAAAAAAA]

[+] EMBL AK102821             [ATCGCCCCAAACCCCCCTCTCCTCGCCTCTCTTCCTCCTCTCGCCAAATGATGAAGTCCCTCTTCCTCTTTTCCGCCCACCCCAAGCCGCCTCCTCTCCCCCCATCCCCCCACCTCCGCAAGCTCCTCCGGCTCACCGCCTCCGCCTCCACATCCGCCTCCTCCCCGCCCCGCGCCGGCTGCTCTCGGGGCCCCGCCCATGCCAGGCCCCGGCCCAGCCCCCGCCCCTCCCCCTCCTCCTCCCTCTACGCGCGCCCCAGCCTCCTCGACATGGAGCGCGGCCGCGCCGCCCGCCGCGCCGACGTCGACGCGTTCCTCGCCTCGCTCGGCGTCGACCCGGGCGAGCTCGCCGGCCTCGAGCTCCCCGCCACCGTCGACGTCATGCGCGAGCGCGTCGAGTTCCTGCACTCCCTCGACCTCTCCAACGAGGACCTCGCCGCGTACCCGCTCGCGCTGGGCTGCAGCGTCCGCAAGAACATGGTCCCCGTCCTCGACTACCTCGGCAAGCTCGGCGTCCGCCAGGACGCGCTCCCGGACCTGCTCCGCCGCTACCCGCAGGTGCTCCACGCCAGCGTCGTCGTCGACCTCGCCCCCGTTGTCAAGTACCTCCAGGGCATGGACGTCAGGCCGCACGACGTGCCGCGGGTGCTCGAGCGCTACCCCGAGCTCCTCGGCTTCAAGCTCGAGGGTACCATGAGCACCTCTATCGCCTACCTCGTCGGCATTGGCGTGGCAAGGCGGCAGGTTGGCAGCGTCATCACCCGTTTCCCAGAGGTGCTGGGCATGCGGGTGGGTAAGATCATTAAGCCTTTCGTCGAACACCTTGAGGGCATTGGGTTGCAGAGGCTAGCTATTGCAAGAATCATCGAGAAGAAGCCATATGTTCTTGGTTTTGGGTTGGAGGACAAGGTGAAGCCTAATATTGAGGCGCTTCTGGAATTTGGGGTGAGGAAGGAGGCATTAGCATTCATTGTGGCACAATACCCAGACATTCTTGGAATTGAGCTGAGAGACAAGCTTGCTACACAACAGAGCTTGTTTGAGTCTAGCATTTTGGTCAGCAGTGAAGATTTTGGTAGAGTGATAGAGAGGATGCCACAAGCCATTAGCCTTGGCCGAACTGCAGTTCTAAAGCATGTTAATTTCCTTACATCTTGTGGCTTCTTGCTCTCTCAGGTCAGCAAGATGGTCGTAGCATGCCCACAGCTGCTCGCATTGAACATGGATATAATGAAGATGAGCTTTGAGTACTTCCAGAATGAGATGGAGAGGGATTTGGAGGAGCTGGTTGAATTCCCTGCATTCTTTACATATGGCCTTGAGTCGACTGTAAGGCCACGGCA TGAGATGGTGGCGAAGAAGGGATTCACATGCTCTCTTGCATGGCTTCTAAACTGTTCTGATGCCAAATTCGATGAGCGCATGAAATATGATACGATTGGCATCGAGGAAATGGAAGTTGATAACTCTTTTGACACGAACACTTTGTCGGAGCGAGTAGAGGATGAGGTGGAAGATGAAGATCTGGATGAGGATAGTGATTATGACAGCACCGATGATGAGTTTATTGAGTAACATGCTTCAAGTATCAACTGTTTGCTGACGAACTTGCATGTAGGTCTTCAGCTTGATGCTCTGTTGTACATGATATGATGCAGTCATGC GGTCACTAGGTGGTTGTTTTTGAAGGATTGGCTTGATCAACAAATGCTGGATATATAAAATTGTAGCTTAGAGGTCCAATGCATTCAGATATCCTTGATCTGTGTAGTGCTGTATTGCTCATATTTGTTACTGACAAGTTGGCATTTCCATTTAGAAACATATTTTTGAGAAAAAATACCTCGTGTGGACAGTTCATATTTCCTGAATACGAAACTT                                        ]
[+] EMBL CA767530             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCTTCTTGCTCTCTCAGGTCAGCAAGATGGTCGTAGCATGCCCACAGCTGCTCGCATTGAACATGGATATAATGGAGATGAGCTTTGAGTACTTCCAGAATGAGATGGAGAGGGATTTGGTGGAGCTGGTTGAATTCCCTGCATTCTTTACATATGGCCTTGAGTCGACTGTAAGGCCACGGCACTGAGATGGTGGCGAAGAAGGGATTCACATGCTCTCTTGCATGGCTTCTAAACTGTTCTGATGCCAAATTCGATGAGCGCATGAAATATGATACGATTGGCATTGAGGAAATGGAAGTTGATAACTCTTTTGACACGAACACTTTGTCGGAGCAAGTAGAGGATGAGGTGGAAGATGAAGATCTGGATGAGGATAGTGATTATGACAGCACCGATGATGAGTTTATTGAGTAACATGCTTCAAGTATCAACTGTTTGCTGACGAACTTGCATGTAGGTCTTCAGCTTGATGCTCTGTTGTACATGATATGATGCAGTCATGC GGTCACTAGGTGGTTGTTTTTGAAGGATTGGCTTGATCAACAAATGCTGGATATATAAAATTGTAGCTTAGAGGTCCAATGCATTCAGATATCCTTGATCTGTGTAGTGCTGTATTGCTCATATTTGGTACTGACAAGNTGGCATTTCCATCTAGAAACATA                                                                                               ]
[+] EMBL AU182125             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGCACCGATGATGAGTTTATTGAGTAACATGCTTCAAGTATCAACTGTTTGCTGACGAACTTGCATGTAGGTCTTCAGCTTGATGCTCTGTTGTACATGATATGATGCAGTCATGCNGGTCACTAGGTGGTTGTTTTTGAAGGATTGGCTTGATCAACAAATGCTGGATATATAAAATTGTAGCTTAGAGGTCCAATGCATTCAGATATCCTTGATCTGTGTAGTGCTGTATTGCTCATATTTGTTACTGACAAGTTGGCATTTCCATTTAGAAACATATTTTTGAGAAAAAATACCTCGTGTGGACAGTTCATATTTCCTGAATACGAAACTTCATTTTAACCTGGTTCTGGCCAGTGCANAAAAAAAAAAAA]




>consensus_5919#0
ATCGCCCCAAACCCCCCTCTCCTCGCCTCTCTTCCTCCTCTCGCCAAATGATGAAGTCCC
TCTTCCTCTTTTCCGCCCACCCCAAGCCGCCTCCTCTCCCCCCATCCCCCCACCTCCGCA
AGCTCCTCCGGCTCACCGCCTCCGCCTCCACATCCGCCTCCTCCCCGCCCCGCGCCGGCT
GCTCTCGGGGCCCCGCCCATGCCAGGCCCCGGCCCAGCCCCCGCCCCTCCCCCTCCTCCT
CCCTCTACGCGCGCCCCAGCCTCCTCGACATGGAGCGCGGCCGCGCCGCCCGCCGCGCCG
ACGTCGACGCGTTCCTCGCCTCGCTCGGCGTCGACCCGGGCGAGCTCGCCGGCCTCGAGC
TCCCCGCCACCGTCGACGTCATGCGCGAGCGCGTCGAGTTCCTGCACTCCCTCGACCTCT
CCAACGAGGACCTCGCCGCGTACCCGCTCGCGCTGGGCTGCAGCGTCCGCAAGAACATGG
TCCCCGTCCTCGACTACCTCGGCAAGCTCGGCGTCCGCCAGGACGCGCTCCCGGACCTGC
TCCGCCGCTACCCGCAGGTGCTCCACGCCAGCGTCGTCGTCGACCTCGCCCCCGTTGTCA
AGTACCTCCAGGGCATGGACGTCAGGCCGCACGACGTGCCGCGGGTGCTCGAGCGCTACC
CCGAGCTCCTCGGCTTCAAGCTCGAGGGTACCATGAGCACCTCTATCGCCTACCTCGTCG
GCATTGGCGTGGCAAGGCGGCAGGTTGGCAGCGTCATCACCCGTTTCCCAGAGGTGCTGG
GCATGCGGGTGGGTAAGATCATTAAGCCTTTCGTCGAACACCTTGAGGGCATTGGGTTGC
AGAGGCTAGCTATTGCAAGAATCATCGAGAAGAAGCCATATGTTCTTGGTTTTGGGTTGG
AGGACAAGGTGAAGCCTAATATTGAGGCGCTTCTGGAATTTGGGGTGAGGAAGGAGGCAT
TAGCATTCATTGTGGCACAATACCCAGACATTCTTGGAATTGAGCTGAGAGACAAGCTTG
CTACACAACAGAGCTTGTTTGAGTCTAGCATTTTGGTCAGCAGTGAAGATTTTGGTAGAG
TGATAGAGAGGATGCCACAAGCCATTAGCCTTGGCCGAACTGCAGTTCTAAAGCATGTTA
ATTTCCTTACATCTTGTGGCTTCTTGCTCTCTCAGGTCAGCAAGATGGTCGTAGCATGCC
CACAGCTGCTCGCATTGAACATGGATATAATGAAGATGAGCTTTGAGTACTTCCAGAATG
AGATGGAGAGGGATTTGGAGGAGCTGGTTGAATTCCCTGCATTCTTTACATATGGCCTTG
AGTCGACTGTAAGGCCACGGCATGAGATGGTGGCGAAGAAGGGATTCACATGCTCTCTTG
CATGGCTTCTAAACTGTTCTGATGCCAAATTCGATGAGCGCATGAAATATGATACGATTG
GCATCGAGGAAATGGAAGTTGATAACTCTTTTGACACGAACACTTTGTCGGAGCGAGTAG
AGGATGAGGTGGAAGATGAAGATCTGGATGAGGATAGTGATTATGACAGCACCGATGATG
AGTTTATTGAGTAACATGCTTCAAGTATCAACTGTTTGCTGACGAACTTGCATGTAGGTC
TTCAGCTTGATGCTCTGTTGTACATGATATGATGCAGTCATGCGGTCACTAGGTGGTTGT
TTTTGAAGGATTGGCTTGATCAACAAATGCTGGATATATAAAATTGTAGCTTAGAGGTCC
AATGCATTCAGATATCCTTGATCTGTGTAGTGCTGTATTGCTCATATTTGTTACTGACAA
GTTGGCATTTCCATTTAGAAACATATTTTTGAGAAAAAATACCTCGTGTGGACAGTTCAT
ATTTCCTGAATACGAAACTTCATTTTAACCTGGTTCTGGCCAGTGCANAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case