These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5984#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 707 fasta sequence [GCCTCGACGTCCATATTATATTACAGTTCTGACAGTATATAGTGGAGCT-ACCTGGAGTACCGTCCAAGTTGGTCCCAATCATGCAAT-AAATACAGAGAAGAAAGAGCTGTATAATCAAAGTACACTTTATACTCCACTACAAGAGAAGAAGAAGAAGAAGGAATGAAGGGAAACGACTATATATATTGTATGTATTTAATTACTCCTGCAAATATATGGATATTGTTTCCCTTCAAGAAAAGAAAAGAAAGAAAGAAAATATATATATTTAATTTATATGGTAGAATATATTGCTCATCCTAAAATAGGGCAGCATCTTCTTAATTCTTCTTCTTCATGCAGGGCAGTCGAT-CGTTATTGCGAGTTCTTGTTTAATTTACCGGCCATTAATTAACTAACTTGCTTCTCTTGTCTCTGCTGTGCACTGCTGATCAGTATAATACGTACATGTCGCGTATAGTGCTGGAGTAGTAG-CGTGTGACATGCAGCTCGGTGCTACTCGCCGTCGCCGGCGGCGGCGGCGGCGGCGCTCCGGCGCCAGATGTCTTCGAGCTCGGTGGCGAAGAGCTTCTCCTGGCCGACGATGATGGTGATGTGGTCCTTGTGGTCGTAGACGGTGACGCGCG-CCCGGGGCACCCTGGCGCCGACGGCNAGGGTGCACTCGACGGGGAAGGAGCTCGTCGTCGCGGCCGNGGAAGACGGCAACC] [+] EMBL CB655601 [GCCTCGACGTCCATATTATATTACAGTTCTGACAGTATATAGTGGAGCT ACCTGGAGTACCGTCCAAGTTGGTCCCAATCATGCAAT AAATACAGAGAAGAAAGAGCTGTATAATCAAAGTACACTTTATACTCCACTACAAGAGAAGAAGAAGAAGAAGGAATGAAGGGAAACGACTATATATATTGTATGTATTTAATTACTCCTGCAAATATATGGATATTGTTTCCCTTCAAGAAAAGAAAAGAAAGAAAGAAAATATATATATTTAATTTATATGGTAGAATATATTGCTCATCCTAAAATAGGGCAGCATCTTCTTAATTCTTCTTCTTCATGCAGGGCAGTCGAT CGTTATTGCGAGTTCTTGTTTAATTTACCGGCCATTAATTAACTAACTTGCTTCTCTTGTCTCTGCTGTGCACTGCTGATCAGTATAATACGTACATGTCGCGTATAGTGCTGGAGTAGTAG CGTGTGACATGCAGCTCGGTGCTACTCGCCGTCGCCGGCGGCGGCGGCGGCGGCGCTCCGGCGCCAGATGTCTTCGAGCTCGGTGGCGAAGAGCTTCTCCTGGCCGACGATGATGGTGATGTGGTCCTTGTGGTCGTAGACGGTGACGCGCG CCCGGGGCACCCTGGC ] [-] EMBL AU225182 [ AGTGGAGCTAACCTGGAGTACCGTCCAAGTTGGTCCC ATCATGCAATAAAATACAGAGAAGAAAGAGCTGTATAATCAAAGTACACTTTATACTCCACTACAAGAGAAGAAGAAGAAGAAGGAATGAAGGGAAACGAC TATATATTGTATGTATTTAATTACTCCTGCAAATATATGGATATTGTTTCCCTTCAAGAAAAGAAAAGAAAGAAAGAAAATATATATATTTAATTTATATGGTAGAATATATTGCTCATCCTAAAATAGGGCAGCATCTTCTTAATTCTTCTTCTTCATGCAGGGCAGTCGAT CGTTATTGCGAGTTCTTGTTTAATTTACCGGCCATTAATTAAgcggc ] [-] EMBL AU182590 [ tttTTTAATTTATATGGTAGAATATATTGCTCATCCTAAAATAGGGCAGCATCTTCTTAATTCTTCTTCTTCATGCAGGGCAGTCGATCCGTTATTGCGAGTTCTTGTTTAATTTACCGGCCATTAATTAACTAACTTGCTTCTCTTGTCTCTGCTGTGCACTGCTGATCAGTATAATACGTACATGTCGCGTATAGTGCTGGAGTAGTAGCCGTGTGACATGCAGCTCGGTGCTACTCGCCGTCGCCGGCGGCGGCGGCGGCGGCGCTCCGGCGCCAGATGTCTTCGAGCTCGGTGGCGAAGAGCTTCTCCTGGCCGACGATGATGGTGATGTGGTCCTTGTGGTCGTAGACGGNGACGCGCGCCCCGGGGCACCCTGGCGCCGACGGCNAGGGTGCACTCGACGGGGAAGGAGCTCGTCGTCGCGGCCGNGGAAGACGGCAACC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||