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Oryza sativa
cluster # 5992 cluster # 5992       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5992#0 length = 1082 sequences # 3  

consensusID : consensus_5992#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1082
fasta sequence
                              [CGTCCTCCTCCCCAACCCCACCCTCCTCGCGATTCCTCCTCCTCGTCGTCGTCGCCGGCGAGAGGAGCCGCCGCCCTGTTGCTGGTGCTCGGTCGATCGCCGCGCAGTTGGTGCGCTTCCCTTCCCTGGAGCCACCACCACCACCACTCACTGCAGGCGAGGGGTGGGTGGTCTACGCTGCGGTGGTCTCGTCTCCTTCCTGCTGCTGCTGCTGCTGCGCCGGGTATGCAGAGCCAGATCGTGTGCCATGGCTGCCGGAGCGTGCTGCGGTACCCGAGCGGGGCGCCCAGCGTGTGCTGCGCGCTCTGCCAGGCCATCACCACCGTGCCGCCCCCTGCCCCAGTAATGGAAATGGCTCATCTAATATGTGGTGGTTGCCGAACATTGCTGATGTATACTCGCAATGCGGACACTGTGAGATGTTCATGTTGCAGTACAGTCAATCTTGTTAGACCAGTGAATAATATAGCACATGTGAGCTGTGGCCAGTGCCGGACGACTTTGATGTATCCATATGGCGCACCTTCTGTCAAATGTGCCATATGCCATTATATCACAAACACCGGAATGAATACTGTGGCACCCACGCCATCTCCAATGCCTACATCAAGTGGATCTTCATATAATGCCCCCCCAAGTGGATCTTCATATAATGCCCCCCCACCAACTTCAGCTCCCACATCTCGACCCCAGAATGTAACCGTTGTTGTCGAGAACCCTATGACTGTTGATGAAAAGGGTAAACTGGTTAGCAATGTTGTAGTTGGAGTTACAACTGGGAAATAGCAGCGTATTGTCTGTACCTTGTTACATCCTTGATTTGTACCACTAAATACGTGAAGATGGGAATACCATGTATTACACTGGTGTTTGGTTGACCATTGAAGAACAAAAATACAAATGTTTTTTGGAATCTTGCAAAGGAAAGTATGAACGCCTAAAGTTGTATTTTGTATCTGTTGATTCTTTTCTTTGTATATGAGCTCTATTAGACTATATTGTGATAGAAGAATGATGGAATGACAAAGCAGTGTCACGTAGTTATACGTACCGTGCAACATGATTGATTTTTTAGTTTGTAT]

[+] EMBL CB000821             [CGTCCTCCTCCCCAACCCCACCCTCCTCGCGATTCCTCCTCCTCGTCGTCGTCGCCGGCGAGAGGAGCCGCCGCCCTGTTGCTGGTGCTCGGTCGATCGCCGCGCAGTTGGTGCGCTTCCCTTCCCTGGAGCCACCACCACCACCACTCACTGCAGGCGAGGGGTGGGTGGTCTACGCTGCGGTGGTCTCGTCTCCTTCCTGCTGCTGCTGCTGCTGCGCCGGGTATGCAGAGCCAGATCGTGTGCCATGGCTGCCGGAGCGTGCTGCGGTACCCGAGCGGGGCGCCCAGCGTGTGCTGCGCGCTCTGCCAGGCCATCACCACCGTGCCGCCCCCTGCCCCAGTAATGGAAATGGCTCATCTAATATGTGGTGGTTGCCGAACATTGCTGATGTATACTCGCAATGCGGACACTGTGAGATGTTCATGTTGCAGTACAGTCAATCTTGTTAGACCAGTGAATAATATAGCACATGTGAGCTGTGGCCAGTGCCGGACGACTTTGATGTATCCATATGGCGCACCTTCTGTCAAATGTGCCATATGCCATTATATCACAAACACCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB000659             [CGTCCTCCTCCCCAACCCCACCCTCCTCGCGATTCCTCCTCCTCGTCGTCGTCGCCGGCGAGAGGAGCCGCCGCCCTGTTGCTGGTGCTCGGTCGATCGCCGCGCAGTTGGTGCGCTTCCCTTCCCTGGAGCCACCACCACCACCACTCACTGCAGGCGAGGGGTGGGTGGTCTACGCTGCGGTGGTCTCGTCTCCTTCCTGCTGCTGCTGCTGCTGCGCCGGGTATGCAGAGCCAGATCGTGTGCCATGGCTGCCGGAGCGTGCTGCGGTACCCGAGCGGGGCGCCCAGCGTGTGCTGCGCGCTCTGCCAGGCCATCACCACCGTGCCGCCCCCTGCCCCAGTAATGGAAATGGCTCATCTAATATGTGGTGGTTGCCGAACATTGCTGATGTATACTCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK111569             [            CAACCCCACCCTCCTCGCGATTCCTCCTCCTCGTCGTCGTCGCCGGCGAGAGGAGCCGCCGCCCTGTTGCTGGTGCTCGGTCGATCGCCGCGCAGTTGGTGCGCTTCCCTTCCCTGGAGCCACCACCACCACCACTCACTGCAGGCGAGGGGTGGGTGGTCTACGCTGCGGTGGTCTCGTCTCCTTCCTGCTGCTGCTGCTGCTGCGCCGGGTATGCAGAGCCAGATCGTGTGCCATGGCTGCCGGAGCGTGCTGCGGTACCCGAGCGGGGCGCCCAGCGTGTGCTGCGCGCTCTGCCAGGCCATCACCACCGTGCCGCCCCCTGCCCCAGTAATGGAAATGGCTCATCTAATATGTGGTGGTTGCCGAACATTGCTGATGTATACTCGCAATGCGGACACTGTGAGATGTTCATGTTGCAGTACAGTCAATCTTGTTAGACCAGTGAATAATATAGCACATGTGAGCTGTGGCCAGTGCCGGACGACTTTGATGTATCCATATGGCGCACCTTCTGTCAAATGTGCCATATGCCATTATATCACAAACACCGGAATGAATACTGTGGCACCCACGCCATCTCCAATGCCTACATCAAGTGGATCTTCATATAATGCCCCCCCAAGTGGATCTTCATATAATGCCCCCCCACCAACTTCAGCTCCCACATCTCGACCCCAGAATGTAACCGTTGTTGTCGAGAACCCTATGACTGTTGATGAAAAGGGTAAACTGGTTAGCAATGTTGTAGTTGGAGTTACAACTGGGAAATAGCAGCGTATTGTCTGTACCTTGTTACATCCTTGATTTGTACCACTAAATACGTGAAGATGGGAATACCATGTATTACACTGGTGTTTGGTTGACCATTGAAGAACAAAAATACAAATGTTTTTTGGAATCTTGCAAAGGAAAGTATGAACGCCTAAAGTTGTATTTTGTATCTGTTGATTCTTTTCTTTGTATATGAGCTCTATTAGACTATATTGTGATAGAAGAATGATGGAATGACAAAGCAGTGTCACGTAGTTATACGTACCGTGCAACATGATTGATTTTTTAGTTTGTAT]


>consensus_5992#0 CGTCCTCCTCCCCAACCCCACCCTCCTCGCGATTCCTCCTCCTCGTCGTCGTCGCCGGCG AGAGGAGCCGCCGCCCTGTTGCTGGTGCTCGGTCGATCGCCGCGCAGTTGGTGCGCTTCC CTTCCCTGGAGCCACCACCACCACCACTCACTGCAGGCGAGGGGTGGGTGGTCTACGCTG CGGTGGTCTCGTCTCCTTCCTGCTGCTGCTGCTGCTGCGCCGGGTATGCAGAGCCAGATC GTGTGCCATGGCTGCCGGAGCGTGCTGCGGTACCCGAGCGGGGCGCCCAGCGTGTGCTGC GCGCTCTGCCAGGCCATCACCACCGTGCCGCCCCCTGCCCCAGTAATGGAAATGGCTCAT CTAATATGTGGTGGTTGCCGAACATTGCTGATGTATACTCGCAATGCGGACACTGTGAGA TGTTCATGTTGCAGTACAGTCAATCTTGTTAGACCAGTGAATAATATAGCACATGTGAGC TGTGGCCAGTGCCGGACGACTTTGATGTATCCATATGGCGCACCTTCTGTCAAATGTGCC ATATGCCATTATATCACAAACACCGGAATGAATACTGTGGCACCCACGCCATCTCCAATG CCTACATCAAGTGGATCTTCATATAATGCCCCCCCAAGTGGATCTTCATATAATGCCCCC CCACCAACTTCAGCTCCCACATCTCGACCCCAGAATGTAACCGTTGTTGTCGAGAACCCT ATGACTGTTGATGAAAAGGGTAAACTGGTTAGCAATGTTGTAGTTGGAGTTACAACTGGG AAATAGCAGCGTATTGTCTGTACCTTGTTACATCCTTGATTTGTACCACTAAATACGTGA AGATGGGAATACCATGTATTACACTGGTGTTTGGTTGACCATTGAAGAACAAAAATACAA ATGTTTTTTGGAATCTTGCAAAGGAAAGTATGAACGCCTAAAGTTGTATTTTGTATCTGT TGATTCTTTTCTTTGTATATGAGCTCTATTAGACTATATTGTGATAGAAGAATGATGGAA TGACAAAGCAGTGTCACGTAGTTATACGTACCGTGCAACATGATTGATTTTTTAGTTTGT AT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)