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Oryza sativa
cluster # 6023 cluster # 6023       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6023#0 length = 1054 sequences # 3  

consensusID : consensus_6023#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1054
fasta sequence
                              [GCTTGCTTGCCGCTCTCAGCCTCTCTCTCGGCCATCACTCTCTTTAAAGCTGCAGCCAGCAAGCTCAAGAAAAAGGAAGAGATAGAACCGATCGATCAATCCAGGCTACTCCAGCTAGCAGCTTCAGCCTGCAGGCCACAATGCATCGACAGAGGAGGAGCATCTCCTCCCCGGGAGGCAACCTCTCGCCGCCGCTCCTCGTGGTAGCCGCCGCCGTATTCGTCGTCGCCGGCCTGAGCGCCGCCGTCCCTGGCGCCGCCGCGTACAAGAACTACACCGTCGGCGACGACAAGGGCTGGTACGACGGCCTCACCCACCCCGGCGTCGACTACCAGGAGTGGGCCGACGGCAAGAACTTCAGCCTCGGAGATTTCCTCATATTCAACACGGACAAGAACCACTCGGTGGTGCAGACGCGGAACGAGACGCTGTACAAGAGCTGCGACTACAACGACTCCGGCCCGGACGACACCGTCGAGTGGTCGGCCGCCGCGCCGGAGTTCAGCAAGGACGCCGTCACCGTCGCCGTGCCGCTGCTCAAGGAAGGGAGCAGCTACTTCTTCTCCGGGAACTACGACGGCGAGCAGTGCGAGAGCGGCCAGCGCTTCGCCATCGCCGTCGCCCACGGCCAGGGCCTCCCGCCGGACCTCCGCCCGCCGGCGGCCGAGGCTCCCGGCCCCTCCTCCTCCGCCGGCGCCGCCGCCGACGCGCCGCCCACCTTCGACTTCAGCCACCCCAAGAACGTGTCCAACTCGCCGGCCGACACGTCGACGACCGCGCCGCTGGACGACGCCGACGACGCGCCGACCACCGGCGGCGCGGGTCGGAGTATAGCCAGGCTCGGGTCCGGTCTGGCGGCGGCGGCGACTCT-GCTCTTCTTCGTGGTGCAAGTGTAGTTCACACACATGGGTGCTCACATGGCGCTTGATTAAGCTTTTGCGCCTGATTTAAGTTATGGGATTTGTTTAATTTGTTGTAGTTTATTTTTTTGAGCTGTTTGAGTAGGAAGAGTGTTGTACACTATACCACCTGAGATGGAGTATATGATTTGCTT]

[+] EMBL AK062646             [GCTTGCTTGCCGCTCTCAGCCTCTCTCTCGGCCATCACTCTCTTTAAAGCTGCAGCCAGCAAGCTCAAGAAAAAGGAAGAGATAGAACCGATCGATCAATCCAGGCTACTCCAGCTAGCAGCTTCAGCCTGCAGGCCACAATGCATCGACAGAGGAGGAGCATCTCCTCCCCGGGAGGCAACCTCTCGCCGCCGCTCCTCGTGGTAGCCGCCGCCGTATTCGTCGTCGCCGGCCTGAGCGCCGCCGTCCCTGGCGCCGCCGCGTACAAGAACTACACCGTCGGCGACGACAAGGGCTGGTACGACGGCCTCACCCACCCCGGCGTCGACTACCAGGAGTGGGCCGACGGCAAGAACTTCAGCCTCGGAGATTTCCTCATATTCAACACGGACAAGAACCACTCGGTGGTGCAGACGCGGAACGAGACGCTGTACAAGAGCTGCGACTACAACGACTCCGGCCCGGACGACACCGTCGAGTGGTCGGCCGCCGCGCCGGAGTTCAGCAAGGACGCCGTCACCGTCGCCGTGCCGCTGCTCAAGGAAGGGAGCAGCTACTTCTTCTCCGGGAACTACGACGGCGAGCAGTGCGAGAGCGGCCAGCGCTTCGCCATCGCCGTCGCCCACGGCCAGGGCCTCCCGCCGGACCTCCGCCCGCCGGCGGCCGAGGCTCCCGGCCCCTCCTCCTCCGCCGGCGCCGCCGCCGACGCGCCGCCCACCTTCGACTTCAGCCACCCCAAGAACGTGTCCAACTCGCCGGCCGACACGTCGACGACCGCGCCGCTGGACGACGCCGACGACGCGCCGACCACCGGCGGCGCGGGTCGGAGTATAGCCAGGCTCGGGTCCGGTCTGGCGGCGGCGGCGACTCT GCTCTTCTTCGTGGTGCAAGTGTAGTTCACACACATGGGTGCTCACATGGCGCTTGATTAAGCTTTTGCGCCTGATTTAAGTTATGGGATTTGTTTAATTTGTTGTAGTTTATTTTTTTGAGCTGTTTGAGTAGGAAGAGTGTTGTACACTATACCACCTGAGATGGAGTATATGATTTGCTT]
[+] EMBL CB634172             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGCACCGTCGCCGTCACCGTCGCCGTGCCGCTGCTCAAGGAAGGGAGCAGCTACTTCTTCTCCGGGAACTACGACGGCGAGCAGTGCGAGAGCGGCCAGCGCTTCGCCATCGCCGTCGCCCACGGCCAGGGCCTCCCGCCGGACCTCCGCCCGCCGGCGGCCGAGGCTCCCGGCCCCTCCTCCTCCGCCGGCGCCGCCGCCGACGCGCCGCCCACCTTCGACTTCAGCCACCCCAAGAACGTGTCCAACTCGCCGGCCGACACGTCGACGACCGCGCCGCTGGACGACGCCGACGACGCGCCGACCACCGGCGGCGCGGGTCGGAGTATAGCCAGGCTCGGGTCCGGTCTGGCGGCGGCGGCGACTCT GCTCTTCTTCGTGGTGCAAGTGTAGTTCACACACATGGGTGCTCACATGGCGCTTGATTAAGCTTTTGCGCCTGATTTAAGTTATGGGATTTGTTTAATTTGTTGTAGTTTATTTTTTTGAGCTGTTTGAGTAGGAAGAGTGTTGTACACTATACCACCTGAGATGGAGTATA          ]
[-] EMBL CB637547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCGGCCGACACGTCGACGACCGCGCCGTTGGTCGACGCCGACGACGCGCCGACCACCGGCGGCGCGGGTCGGAGTATAGCCAGGCTCGGGTCCGGTTTGGCGGCGGCGGCGACTATAGATATTTTTCGTGGTGCAAGTGTAGTTCACACACATGGGTGCTCACATGGCGCTTGATTAAGCTTTTGCGCCTGATTTAAGTTATGGGATTTGTTTAATTTGTTGTAGTTTATTTTTTTGAGCTGTTTGAGTAGGAAGAGTGTTGTACGCTATACCACCTa                      ]


>consensus_6023#0 GCTTGCTTGCCGCTCTCAGCCTCTCTCTCGGCCATCACTCTCTTTAAAGCTGCAGCCAGC AAGCTCAAGAAAAAGGAAGAGATAGAACCGATCGATCAATCCAGGCTACTCCAGCTAGCA GCTTCAGCCTGCAGGCCACAATGCATCGACAGAGGAGGAGCATCTCCTCCCCGGGAGGCA ACCTCTCGCCGCCGCTCCTCGTGGTAGCCGCCGCCGTATTCGTCGTCGCCGGCCTGAGCG CCGCCGTCCCTGGCGCCGCCGCGTACAAGAACTACACCGTCGGCGACGACAAGGGCTGGT ACGACGGCCTCACCCACCCCGGCGTCGACTACCAGGAGTGGGCCGACGGCAAGAACTTCA GCCTCGGAGATTTCCTCATATTCAACACGGACAAGAACCACTCGGTGGTGCAGACGCGGA ACGAGACGCTGTACAAGAGCTGCGACTACAACGACTCCGGCCCGGACGACACCGTCGAGT GGTCGGCCGCCGCGCCGGAGTTCAGCAAGGACGCCGTCACCGTCGCCGTGCCGCTGCTCA AGGAAGGGAGCAGCTACTTCTTCTCCGGGAACTACGACGGCGAGCAGTGCGAGAGCGGCC AGCGCTTCGCCATCGCCGTCGCCCACGGCCAGGGCCTCCCGCCGGACCTCCGCCCGCCGG CGGCCGAGGCTCCCGGCCCCTCCTCCTCCGCCGGCGCCGCCGCCGACGCGCCGCCCACCT TCGACTTCAGCCACCCCAAGAACGTGTCCAACTCGCCGGCCGACACGTCGACGACCGCGC CGCTGGACGACGCCGACGACGCGCCGACCACCGGCGGCGCGGGTCGGAGTATAGCCAGGC TCGGGTCCGGTCTGGCGGCGGCGGCGACTCTGCTCTTCTTCGTGGTGCAAGTGTAGTTCA CACACATGGGTGCTCACATGGCGCTTGATTAAGCTTTTGCGCCTGATTTAAGTTATGGGA TTTGTTTAATTTGTTGTAGTTTATTTTTTTGAGCTGTTTGAGTAGGAAGAGTGTTGTACA CTATACCACCTGAGATGGAGTATATGATTTGCTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)