cluster # 6035

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6035 cluster # 6035 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6035#0 length = 3232 sequences # 3
consensusID : consensus_6035#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3232
fasta sequence
                              [GGGAAAAAATTGGAAGCCCTAGATTTTGGCGGGTTGGCTACGGCGAGGTGCGGGGGAGGGGTCGGGGTCGGGATCGGCGGGCGGATCCGGTGGGTGGAGGAGGTTGGGCGGCGAGATCTATGCGGTGGGGAGGGGAGGGGAGGAGGAGGAGGAGGGGAGCGGGGTGAGAGGGGAGGAGGAGGTGGTGGATGGCGGAGGCGGCGGGTTCGTCGTCGTCGTCGTCGGCGTCGGCGGTGGTGGTGGCTGTGGTGATTGCGGTGGTGGTGGTGGTGTGGGTTGTGGTGCGGCGGAAGGTGAGGCGCGCCGCGGCGCGGAGGGAGGAGGTGCTGCGGCTCACGCGGCTGGCGCAGGAGGAGTCGGAGATGGCGGAGGTGGAGTGCGCGCGCGCCTACTACTCGGAGCTGTTCCCGAGCGTCGTGCACGCGACGGAGATGGTGGATGAGGCGGCGTGGGGGGCGCCGCCGGCCGTGGTTCCGGCTCAGGCGGAGGCAGAGGCGGAGATGGAGGCCCGGGCCCAGCCGCAGCCGCAGCCGCCGGTGGGTGCCAAGGGGGTCTGCGCGGTGTGCTTCCGGCCGACGACGTTCAGGTGCAAGCAGTGCAAGGCTGTCAAGTACTGTTCCTTCAAATGCCAGATAGCCCACTGGAGACAGGGTCATAAAAATGAATGCCGCCCACCAAGCACTGATGCTAATCATGATGATGTGGCTGAACTTTCTGTTGCAAAGGAAAGGAAAATTGAGCAGACAAGTGCTTCTGAAGAAAACATAGCTGAAACCAACACGGCAGCCACCGTGAAGAATTTAAATGATAAAACAAAAGATATGCCCTCAGAAGTACTTGCTTCGGTGGAGGTTCCTGATGATGACCATTCTGTCAGTGCGGTCAAACTCCCTCAAAGTTCTTCACAAGTAGCTTCTCTTGGCAGTAGAAAGACAGAATCAAATATGAAACCTACAACTCCTGTTGAAAATGGTTCTTACACAAAGGACTTAGATGAGGCGTTGGTGTGTAGATTTCAACCTTCTCCACCAAAGATTAGTGGCTCTGGAAGTCTTATCAACAAAGAGTCCTTAATTGATTCCAAGAAGCACCAGGATTGCTCTCAAACTAGTAACAGCAAAAAATATGCAGATAACAACAATGCTCAAGCTGCTCTACCTGTTGCAGTAGAACCTAAAACTTCCAGGACTGCTCTTCATGTGGAAGTTGGACACTCCAAGACAAAAGCTGCTGGCTCAGACAACATTGGTGTGTCAAAAATGGTGCCATCTGTTTTGACTGTTGATAAAGTTTCTCTGTTCCCGGTGGACGTTCTGTTACACCTAATTCATCAAAAAGGGCTGATAATATTGCTGAAAGGAATTCTAAACCATCAGAGAAATCAATTTCAACAGCAAATAGCCTGGCAACATCTCTGAAAAAAATTGTCAGGCAGCAAACAGCACCAAAAGTTGTGAGGCATTATCCATCAGAGCCAACACATTTTCCATATGAGCTTTTCATTAAGCTCTATGAAAAGGTTGAATTGCAACCGTTTGGTCTTCATAACCTTGGCAATAGTTGCTATGCAAATGCTGTTCTTCAGTGCTTAATGTTTACCCGACCACTTACATCATATCTTTTGGGAGGGCTTCATTCAAAAAATTGTTCCAAAAAGGAATGGTGCTTCATGTGTGAATTTGAAAAACTCGTTGGGGAGGGCAGACAAGGCAAGATTGCTTTGTCACCAACTGGGATACTCTCTCATTTGCCTGACATTGGAAGTAGCTTTGGTCCTGGTAAACAAGAAGATGCTCATGAATTCCTTAGGTACGCCATTGATGCTATGCAATCTGTATGCATGAAGGAAGCCAGGAAAAGCGGCACTCATCGGTTACACGAAGAAACAACACTTATGCAATTAATATTTGGGGGCTATCTGCGATCTAAGATAAGATGCACAAGATGTGATGCTACTTCCGAGCAACATGAGCGTATTTTGGATCTTACTGTTGAAATAGATGGCGACATCAGTTCACTGGAAGGAGCACTTGAGCGATTTACATCTACAGAAGTCTTGGATGGAGATAATAAATATAAATGCAGCAGATGCAAATCGCATGAGCGCGCTAAAAAGAAGCTGACAATATCGGAAGCACCAAATGTCCTGACTATTGCGCTGAAAAGATATCAGTCTGGAAAGTTTGGAAAGATCAACAAAGCCATCAGATTTCCAGAGACCTTGAACTTGCAGCGCTATATGAGCCCAAAAGCTGATGACACTTCCCCTGTTTACAGCCTGTATGCAGTGGTTGTCCATCATGATATTATGAATGCCGCCTTTTCTGGTCATTATGTATGCTATGTGAAGGACACGCATGGGAAGTGGTACAAAACAGATGACAGTCAGGTCAAACCTGTATCTCTGGAAAATGTCATGTCGAAGTGCGCATACATGCTGCTCTATGCAAGGTGTTCACCAAGAGCTCCAAGCTCTGTAAGGCCAGCGCTGATGGCTCAAGATCCAGCACGTGTAAAGAAGGACAAGGCAAGGGTAAATTCAGGACGGTGGCATGGAGGAGGTCCCATACACCAAGGTGGTCAGATGTACGCAGATCACATGACAGATGATTTGCCCCATACATATGACGAGTTTGGACATGGACCATATTCGCCAGCAGAATCTCCTAGTCCAAGTGAGAGTTCATCAATTTTCACCAGTTCCGACACAGGGTCACATAGCACCGACAGCAGTGAAAGCACTAGAAACTCTACCAGTGAGGATATGGAACGCCTCATATTTGGTGATCAAGTTTCATACTTTGATGGCTCTATGTTCGGACATGGGGAAAACGGCCGTATGACTTATTCCCGATCAAAGTCTAGCTTGGGTACCAGTTCATCGGGTCAAGAGGTGGATCAGTATAGGCCTGACGAGCACAGGCTTCAGGGTGCCAGGGAGGGTTGGAATCAGGGCGATGAAAGTTCTTCCTTGTATACTAACCAAAGTAAACATCAATTTAGTAGTAAGTTAACAGAACAATATAGGAGGAGGTTAGATGGGACTGAGCATGATCCTGGAGAAGCCAATAGTGTTTTATTGAGGAGATCGGCTAGGGAAAGGACGGCCCAAACATTTTATTGACATGTGGAGGGTTTGGGTTGTAGAGGTATAATAATGTAGGATGTATTATTACCCCACTGCAATGAAAAAGGAAAAAATGGCTCAGTTTGTAAAAAAAAAAAAAAAAAA]

[+] EMBL AK099704             [GGGAAAAAATTGGAAGCCCTAGATTTTGGCGGGTTGGCTACGGCGAGGTGCGGGGGAGGGGTCGGGGTCGGGATCGGCGGGCGGATCCGGTGGGTGGAGGAGGTTGGGCGGCGAGATCTATGCGGTGGGGAGGGGAGGGGAGGAGGAGGAGGAGGGGAGCGGGGTGAGAGGGGAGGAGGAGGTGGTGGATGGCGGAGGCGGCGGGTTCGTCGTCGTCGTCGTCGGCGTCGGCGGTGGTGGTGGCTGTGGTGATTGCGGTGGTGGTGGTGGTGTGGGTTGTGGTGCGGCGGAAGGTGAGGCGCGCCGCGGCGCGGAGGGAGGAGGTGCTGCGGCTCACGCGGCTGGCGCAGGAGGAGTCGGAGATGGCGGAGGTGGAGTGCGCGCGCGCCTACTACTCGGAGCTGTTCCCGAGCGTCGTGCACGCGACGGAGATGGTGGATGAGGCGGCGTGGGGGGCGCCGCCGGCCGTGGTTCCGGCTCAGGCGGAGGCAGAGGCGGAGATGGAGGCCCGGGCCCAGCCGCAGCCGCAGCCGCCGGTGGGTGCCAAGGGGGTCTGCGCGGTGTGCTTCCGGCCGACGACGTTCAGGTGCAAGCAGTGCAAGGCTGTCAAGTACTGTTCCTTCAAATGCCAGATAGCCCACTGGAGACAGGGTCATAAAAATGAATGCCGCCCACCAAGCACTGATGCTAATCATGATGATGTGGCTGAACTTTCTGTTGCAAAGGAAAGGAAAATTGAGCAGACAAGTGCTTCTGAAGAAAACATAGCTGAAACCAACACGGCAGCCACCGTGAAGAATTTAAATGATAAAACAAAAGATATGCCCTCAGAAGTACTTGCTTCGGTGGAGGTTCCTGATGATGACCATTCTGTCAGTGCGGTCAAACTCCCTCAAAGTTCTTCACAAGTAGCTTCTCTTGGCAGTAGAAAGACAGAATCAAATATGAAACCTACAACTCCTGTTGAAAATGGTTCTTACACAAAGGACTTAGATGAGGCGTTGGTGTGTAGATTTCAACCTTCTCCACCAAAGATTAGTGGCTCTGGAAGTCTTATCAACAAAGAGTCCTTAATTGATTCCAAGAAGCACCAGGATTGCTCTCAAACTAGTAACAGCAAAAAATATGCAGATAACAACAATGCTCAAGCTGCTCTACCTGTTGCAGTAGAACCTAAAACTTCCAGGACTGCTCTTCATGTGGAAGTTGGACACTCCAAGACAAAAGCTGCTGGCTCAGACAACATTGGTGTGTCAAAAATGGTGCCATCTGTTTTGACTGTTGATAAAGTTTCTCTGTTCCCGGTGGACGTTCTGTTACACCTAATTCATCAAAAAGGGCTGATAATATTGCTGAAAGGAATTCTAAACCATCAGAGAAATCAATTTCAACAGCAAATAGCCTGGCAACATCTCTGAAAAAAATTGTCAGGCAGCAAACAGCACCAAAAGTTGTGAGGCATTATCCATCAGAGCCAACACATTTTCCATATGAGCTTTTCATTAAGCTCTATGAAAAGGTTGAATTGCAACCGTTTGGTCTTCATAACCTTGGCAATAGTTGCTATGCAAATGCTGTTCTTCAGTGCTTAATGTTTACCCGACCACTTACATCATATCTTTTGGGAGGGCTTCATTCAAAAAATTGTTCCAAAAAGGAATGGTGCTTCATGTGTGAATTTGAAAAACTCGTTGGGGAGGGCAGACAAGGCAAGATTGCTTTGTCACCAACTGGGATACTCTCTCATTTGCCTGACATTGGAAGTAGCTTTGGTCCTGGTAAACAAGAAGATGCTCATGAATTCCTTAGGTACGCCATTGATGCTATGCAATCTGTATGCATGAAGGAAGCCAGGAAAAGCGGCACTCATCGGTTACACGAAGAAACAACACTTATGCAATTAATATTTGGGGGCTATCTGCGATCTAAGATAAGATGCACAAGATGTGATGCTACTTCCGAGCAACATGAGCGTATTTTGGATCTTACTGTTGAAATAGATGGCGACATCAGTTCACTGGAAGGAGCACTTGAGCGATTTACATCTACAGAAGTCTTGGATGGAGATAATAAATATAAATGCAGCAGATGCAAATCGCATGAGCGCGCTAAAAAGAAGCTGACAATATCGGAAGCACCAAATGTCCTGACTATTGCGCTGAAAAGATATCAGTCTGGAAAGTTTGGAAAGATCAACAAAGCCATCAGATTTCCAGAGACCTTGAACTTGCAGCGCTATATGAGCCCAAAAGCTGATGACACTTCCCCTGTTTACAGCCTGTATGCAGTGGTTGTCCATCATGATATTATGAATGCCGCCTTTTCTGGTCATTATGTATGCTATGTGAAGGACACGCATGGGAAGTGGTACAAAACAGATGACAGTCAGGTCAAACCTGTATCTCTGGAAAATGTCATGTCGAAGTGCGCATACATGCTGCTCTATGCAAGGTGTTCACCAAGAGCTCCAAGCTCTGTAAGGCCAGCGCTGATGGCTCAAGATCCAGCACGTGTAAAGAAGGACAAGGCAAGGGTAAATTCAGGACGGTGGCATGGAGGAGGTCCCATACACCAAGGTGGTCAGATGTACGCAGATCACATGACAGATGATTTGCCCCATACATATGACGAGTTTGGACATGGACCATATTCGCCAGCAGAATCTCCTAGTCCAAGTGAGAGTTCATCAATTTTCACCAGTTCCGACACAGGGTCACATAGCACCGACAGCAGTGAAAGCACTAGAAACTCTACCAGTGAGGATATGGAACGCCTCATATTTGGTGATCAAGTTTCATACTTTGATGGCTCTATGTTCGGACATGGGGAAAACGGCCGTATGACTTATTCCCGATCAAAGTCTAGCTTGGGTACCAGTTCATCGGGTCAAGAGGTGGATCAGTATAGGCCTGACGAGCACAGGCTTCAGGGTGCCAGGGAGGGTTGGAATCAGGGCGATGAAAGTTCTTCCTTGTATACTAACCAAAGTAAACATCAATTTAGTAGTAAGTTAACAGAACAATATAGGAGGAGGTTAGATGGGACTGAGCATGATCCTGGAGAAGCCAATAGTGTTTTATTGAGGAGATCGGCTAGGGAAAGGACGGCCCAAACATTTTATTGACATGTGGAGGGTTTGGGTTGTAGAGGTATAATAATGTAGGATGTATTATTACCCCACTGCAATGAAAAAGGAAAAAATGGCT                          ]
[-] EMBL CB647811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGATGGCTCAAGATCCAGCACGTGTAAAGAAGGACAAGGCAAGGGTAAATTCAGGACGGTGGCATGGAGGAGGTCCCATACACCAAGGTGGTCAGATGTACGCAGATCACATGACAGATGATTTGCCCCATACATATGACGAGTTTGGACATGGACCATATTCGCCAGCAGAATCTCCTAGTCCAAGTGAGAGTTCATCAATTTTCACCAGTTCCGACACAGGGTCACATAGCACCGACAGCAGTGAAAGCACTAGAAACTCTACCAGTGAGGATATGGAACGCCTCATATTTGGTGATCAAGTTTCATACTTTGATGGCTCTATGTTCGGACATGGGGAAAACGGCCGTATGACTTATTCCCGATCAAAGTCTAGCTTGGGTACCAGTTCATCGGGTCAAGAGGTGGATCAGTATAGGCCTGACGAGCACAGGCTTCAGGGTGCCAGGGAGGGTTGGAATCAGGGCGATGAAAGTTCTTCCTTGTATACTAACCAAAGTAAACATCAATTTAGTAGTAAGTTAACAGAACAATATAGGAGGAGGTTAGATGGGACTGAGCATGATCCTGGAGAAGCCAATAGTGTTTTATTGAGGAGATCGGCTAGGGAAAGGACGGCCCAAACATTTTATTGACATGTGGAGGGTTTGGGTTGTAGAGGTATAATAATGTAGGATGTATTATTACCCCACTGCAATGAAAAAGGAAAAAATGGCTCAG                       ]
[+] EMBL AU071150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAGGTGGATCAGTATAGGCCTGACGAGCACAGGCTTCAGGGTGCCAGGGAGGGTTGGAATCAGGGCGATGAAAGTTCTTCCTTGTATACTAACCAAAGTAAACATCAATTTAGTAGTAAGTTAACAGAACAATATAGGAGGAGGTTAGATGGGACTGAGCATGATCCTGGAGAAGCCAATAGTGTTTTATTGAGGAGATCGGCTAGGGAAAGGACGGCCCAAACATTTTATTGACATGTGGAGGGTTTGGGTTGTAGAGGTATAATAATGTAGGATGTATTATTACCCCACTGCAATGAAAAAGGAAAAAATGGCTCAGTTTGTAAAAAAAAAAAAAAAAAA]




>consensus_6035#0
GGGAAAAAATTGGAAGCCCTAGATTTTGGCGGGTTGGCTACGGCGAGGTGCGGGGGAGGG
GTCGGGGTCGGGATCGGCGGGCGGATCCGGTGGGTGGAGGAGGTTGGGCGGCGAGATCTA
TGCGGTGGGGAGGGGAGGGGAGGAGGAGGAGGAGGGGAGCGGGGTGAGAGGGGAGGAGGA
GGTGGTGGATGGCGGAGGCGGCGGGTTCGTCGTCGTCGTCGTCGGCGTCGGCGGTGGTGG
TGGCTGTGGTGATTGCGGTGGTGGTGGTGGTGTGGGTTGTGGTGCGGCGGAAGGTGAGGC
GCGCCGCGGCGCGGAGGGAGGAGGTGCTGCGGCTCACGCGGCTGGCGCAGGAGGAGTCGG
AGATGGCGGAGGTGGAGTGCGCGCGCGCCTACTACTCGGAGCTGTTCCCGAGCGTCGTGC
ACGCGACGGAGATGGTGGATGAGGCGGCGTGGGGGGCGCCGCCGGCCGTGGTTCCGGCTC
AGGCGGAGGCAGAGGCGGAGATGGAGGCCCGGGCCCAGCCGCAGCCGCAGCCGCCGGTGG
GTGCCAAGGGGGTCTGCGCGGTGTGCTTCCGGCCGACGACGTTCAGGTGCAAGCAGTGCA
AGGCTGTCAAGTACTGTTCCTTCAAATGCCAGATAGCCCACTGGAGACAGGGTCATAAAA
ATGAATGCCGCCCACCAAGCACTGATGCTAATCATGATGATGTGGCTGAACTTTCTGTTG
CAAAGGAAAGGAAAATTGAGCAGACAAGTGCTTCTGAAGAAAACATAGCTGAAACCAACA
CGGCAGCCACCGTGAAGAATTTAAATGATAAAACAAAAGATATGCCCTCAGAAGTACTTG
CTTCGGTGGAGGTTCCTGATGATGACCATTCTGTCAGTGCGGTCAAACTCCCTCAAAGTT
CTTCACAAGTAGCTTCTCTTGGCAGTAGAAAGACAGAATCAAATATGAAACCTACAACTC
CTGTTGAAAATGGTTCTTACACAAAGGACTTAGATGAGGCGTTGGTGTGTAGATTTCAAC
CTTCTCCACCAAAGATTAGTGGCTCTGGAAGTCTTATCAACAAAGAGTCCTTAATTGATT
CCAAGAAGCACCAGGATTGCTCTCAAACTAGTAACAGCAAAAAATATGCAGATAACAACA
ATGCTCAAGCTGCTCTACCTGTTGCAGTAGAACCTAAAACTTCCAGGACTGCTCTTCATG
TGGAAGTTGGACACTCCAAGACAAAAGCTGCTGGCTCAGACAACATTGGTGTGTCAAAAA
TGGTGCCATCTGTTTTGACTGTTGATAAAGTTTCTCTGTTCCCGGTGGACGTTCTGTTAC
ACCTAATTCATCAAAAAGGGCTGATAATATTGCTGAAAGGAATTCTAAACCATCAGAGAA
ATCAATTTCAACAGCAAATAGCCTGGCAACATCTCTGAAAAAAATTGTCAGGCAGCAAAC
AGCACCAAAAGTTGTGAGGCATTATCCATCAGAGCCAACACATTTTCCATATGAGCTTTT
CATTAAGCTCTATGAAAAGGTTGAATTGCAACCGTTTGGTCTTCATAACCTTGGCAATAG
TTGCTATGCAAATGCTGTTCTTCAGTGCTTAATGTTTACCCGACCACTTACATCATATCT
TTTGGGAGGGCTTCATTCAAAAAATTGTTCCAAAAAGGAATGGTGCTTCATGTGTGAATT
TGAAAAACTCGTTGGGGAGGGCAGACAAGGCAAGATTGCTTTGTCACCAACTGGGATACT
CTCTCATTTGCCTGACATTGGAAGTAGCTTTGGTCCTGGTAAACAAGAAGATGCTCATGA
ATTCCTTAGGTACGCCATTGATGCTATGCAATCTGTATGCATGAAGGAAGCCAGGAAAAG
CGGCACTCATCGGTTACACGAAGAAACAACACTTATGCAATTAATATTTGGGGGCTATCT
GCGATCTAAGATAAGATGCACAAGATGTGATGCTACTTCCGAGCAACATGAGCGTATTTT
GGATCTTACTGTTGAAATAGATGGCGACATCAGTTCACTGGAAGGAGCACTTGAGCGATT
TACATCTACAGAAGTCTTGGATGGAGATAATAAATATAAATGCAGCAGATGCAAATCGCA
TGAGCGCGCTAAAAAGAAGCTGACAATATCGGAAGCACCAAATGTCCTGACTATTGCGCT
GAAAAGATATCAGTCTGGAAAGTTTGGAAAGATCAACAAAGCCATCAGATTTCCAGAGAC
CTTGAACTTGCAGCGCTATATGAGCCCAAAAGCTGATGACACTTCCCCTGTTTACAGCCT
GTATGCAGTGGTTGTCCATCATGATATTATGAATGCCGCCTTTTCTGGTCATTATGTATG
CTATGTGAAGGACACGCATGGGAAGTGGTACAAAACAGATGACAGTCAGGTCAAACCTGT
ATCTCTGGAAAATGTCATGTCGAAGTGCGCATACATGCTGCTCTATGCAAGGTGTTCACC
AAGAGCTCCAAGCTCTGTAAGGCCAGCGCTGATGGCTCAAGATCCAGCACGTGTAAAGAA
GGACAAGGCAAGGGTAAATTCAGGACGGTGGCATGGAGGAGGTCCCATACACCAAGGTGG
TCAGATGTACGCAGATCACATGACAGATGATTTGCCCCATACATATGACGAGTTTGGACA
TGGACCATATTCGCCAGCAGAATCTCCTAGTCCAAGTGAGAGTTCATCAATTTTCACCAG
TTCCGACACAGGGTCACATAGCACCGACAGCAGTGAAAGCACTAGAAACTCTACCAGTGA
GGATATGGAACGCCTCATATTTGGTGATCAAGTTTCATACTTTGATGGCTCTATGTTCGG
ACATGGGGAAAACGGCCGTATGACTTATTCCCGATCAAAGTCTAGCTTGGGTACCAGTTC
ATCGGGTCAAGAGGTGGATCAGTATAGGCCTGACGAGCACAGGCTTCAGGGTGCCAGGGA
GGGTTGGAATCAGGGCGATGAAAGTTCTTCCTTGTATACTAACCAAAGTAAACATCAATT
TAGTAGTAAGTTAACAGAACAATATAGGAGGAGGTTAGATGGGACTGAGCATGATCCTGG
AGAAGCCAATAGTGTTTTATTGAGGAGATCGGCTAGGGAAAGGACGGCCCAAACATTTTA
TTGACATGTGGAGGGTTTGGGTTGTAGAGGTATAATAATGTAGGATGTATTATTACCCCA
CTGCAATGAAAAAGGAAAAAATGGCTCAGTTTGTAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case