cluster # 6061

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Oryza sativa
cluster # 6061 cluster # 6061 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6061#0 length = 2291 sequences # 3
consensusID : consensus_6061#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2291
fasta sequence
                              [AAAAATACATATGGGCACCGAACCCTCCCAAACCCCTACCCCCCCGCCGCCGCCGCCGCCGGCGAGCCCTCGGCGGCGCGCCCCGCAGCCGGCCACCATCCTCAGCCCTTCCTTCTCGCGGAACCCTCTACGCGCCACCGCCGCCTCGGCCTCCGCCTCCGCCGGCCCCGTCCCCTCCCCCTCCTCATCCTCCGACTGCGAGGAGCACCCCTGCGTGGAGCTGTTCGATTGGTGGCTGAAGAGGGTGGAGGGGGACGACCGGAAGGTCCGCATCGCCGGCCACACGGAAAGGAACCACAAACCCCATCTATTCACTTCTGCACCCATTGTAAAACGGCATAAGGCTTGTATGCTTGAAGCTGAAGACAGCATCATAGTGTTAATTGATGGCCCGTTGGACCTTTCGCAAATGGAAAATAATGGATATTCGCTTGAGGTCTGCGAAAAATTCATGACTGGATTTCCATGCTTGTGGGAGAGTTACAACTTAGGATCTCAACAGAGCTGTTCTTACACTAGCATTTCACGAGATGGCCGAACTAAATTTTATTTGGAGCGATTCCAGATAGGAAACTTTATTGATAAAGTTGGATCTTCTTTCCTAGCGAACCTTCTTAACAACTCAAGAAGTTCCTCAGGTAATGATGCTGATTCCTTTGAAAAAGGTTCCTATTTGTCAAACAAAAAACCAAGATTTGAGGAATACACCTGCGACCTTGACATTTCAGCAAAGGAAAAGACTACTGCTTTTAACGAAGGCAGAACAGGATCTCTAGCTGTATGTAACAAGGTGGGTAATCAGCAGATAGACTTGGTCGTGAAGAGCTTTTCTAAAGAAAGGGGTCATGGCAATATAGATCTTAGTGCATCTTTGACTTCTATAGAAGAAACTACTAGGGACAAAACTTCTGAAGATGCAGGGAATCAGAATGAATTTATCCATTCAGATGCAGAATATCAGGAGGCTGGCAGCCATCTTGTCAACTCTGATTCAATTTACGGTATGTCCACTGAGTCAGGGAATCAGAATGAATTTATCCATGCAGATGCAGAACATCAGGAGGTTGGCAGCCATGTTGTCAACTCCGATTCAAATTTCGATATGTCCACTGATAATATGATCTGTGAGATGGGAGATGGAAGTGCTAATGCTGGCAGTGCAGTGAGTCAGGGATCTAAAGAGGTTTTAGCCACCGTGCTACCTGAAAGGGCTAATCTCTCCCCAGACAGTTGTTTGGACAATATTCTACCCATAAGTACATGTAATAGCAATAATTGCTTGGAAAATCAAGGTTTCCCGGAAATAGCTCAGCACATGACATTGAACGAGGAGGTAGTACCAAATGAAGACATTTCAACTTCAGTTCATTCAGATGTGGAGTCCCTGGGAAATCCTGTAGGCCCAGCAGAGGTGCAGAGATCAGAGTGTGACATATTACAGGGTGCTCCTAGATCACCTAAGCAGAATGTAGGCTCAGCACAGGAGCAGAGACCTGAGCAGTCCATGTCACAAGGTGCTGCTAGATCGCCAATGATCAGAACTCCAATTCCAGATGGTGCTCCTAGCTTGCGTAATCAGCATTTAGGCTCAGCACAGGAGCAGAGATCTGAGCATTTCATGTTAAAGGGCGCTACTAGATCGCCAATGATCAGAACTCCAATTCCATATGGACATTATTCTCCTCTTACCCGTGGCAAGGCCAAGTCATCATCAGTTTCAACACCTGAATCTCTCAAACTGAGAAGAACTAGATCAGGTCGCGTGGTAGTTCCCACATTGGATCCTGGATGCCAAAGGATCGTCTATGACAGAGACGGTTTGGTTTCAGGTGTGGCTGGCTTAGAGTTTGAATCACCACCTCTCAAAGGGAACGAGTCAAGGACTCCTGAGAGCAAGAGAAGGGTCCGTTGAGCAACTTCCATAGCCTGCGCATCGATTATATCCTCTTTGAAAATGTGGGCTCCATTCTGCATTTTTGATGATCTATCTGGAATCCGCTCGGTATAGGATGAGGATGGTGGATTTTGTATATACGCCTGGCAGTTTAGCTTGCAGATAATTGTTGTTTGGTAGCTGATTGTAGGCCTTGGTATGGACCAATGTTGCTAGTTTCGAAATGACCAATGTTGCTGGTTTCATGTCAGCACTTGCAGCACCTCTTCACCTCTATGGTGGCCATCAACATTAACTAGCTAGCTAGTTTGTTCTGCATCACCAGTCGCAGGTGTCTGATACAGCTAATGTATTTTGATTCCTGGAACTGTGCTATCCACACCAATATAAGACCCAT]

[+] EMBL CB635114             [AAAAATACATATGGGCACCGAACCCTCCCAAACCCCTACCCCCCCGCCGCCGCCGCCGCCGGCGAGCCCTCGGCGGCGCGCCCCGCAGCCGGCCACCATCCTCAGCCCTTCCTTCTCGCGGAACCCTCTACGCGCCACCGCCGCCTCGGCCTCCGCCTCCGCCGGCCCCGTCCCCTCCCCCTCCTCATCCTCCGACTGCGAGGAGCACCCCTGCGTGGAGCTGTTCGATTGGTGGCTGAAGAGGGTGGAGGGGGACGACCGGAAGGTCCGCATCGCCGGCCACACGGAAAGGAACCACAAACCCCATCTATTCACTTCTGCACCCATTGTAAAACGGCATAAGGCTTGTATGCTTGAAGCTGAAGACAGCATCATAGTGTTAATTGATGGCCCGTTGGACCTTTCGCAAATGGAAAATAATGGATATTCGCTTGAGGTCTGCGAAAAATTCATGACTGGATTTCCATGCTTGTGGGAGAGTTACAACTTAGGATCTCAACAGAGCTGTTCTTACACTAGCATTTCACGAGATGGCCGAACTAAATTTTATTTGGAGCGATTCCAGATAGGAAACTTTATTGATAAAGTTGGATCTTCTTTCCTAGCGAACCTTCTTAACAACTCAAGAAGTTCCTCAGGTAATGATGCTGATTCCTTTGAAAAAGGTTCCTATTTGTCAAACAAAAAACCAAGATTTGAGGAATACACCTGCGACCTTGACATTTCAGCAAAGGAAAAGACTACTGCTTTTAACGAAGGCAGAACAGGATCTCTAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK102622             [                  CGAACCCTCCCAAACCCCTACCCCCCCGCCGCCGCCGCCGCCGGCGAGCCCTCGCCGGCGCGCGCCGCAGCCGGCCACCATCCTCAGCCCTTCCTTCTCGCGGAACCCTCTACGCGCCACCGCCGCCTCCGCCTCCGCCTCCGCCGGCCCCGTCCCCTCCCCCTCCTCCTCCTCCGACTGCGAGGAGCACCCCTGCGTGGAGCTGTTCGATTGGTGGCTGAAGAGGGTGGAGGGGGACGACCGGAAGGTCCGCATCGCCGGCCACACGGAAAGGAACCACAAACCCCATCTATTCACTTCTGCACCCATTGTAAAACGGCATAAGGCTTGTATGCTTGAAGCTGAAGACAGCATCATAGTGTTAATTGATGGCCCGTTGGACCTTTCGCAAATGGAAAATAATGGATATTCGCTTGAGGTCTGCGAAAAATTCATGACTGGATTTCCATGCTTGTGGGAGAGTTACAACTTAGGATCTCAACAGAGCTGTTCTTACACTAGCATTTCACGAGATGGCCGAACTAAATTTTATTTGGAGCGATTCCAGATAGGAAACTTTATTGATAAAGTTGGATCTTCTTTCCTAGCGAACCTTCTTAACAACTCAAGAAGTTCCTCAGGTAATGATGCTGATTCCTTTGAAAAAGGTTCCTATTTGTCAAACAAAAAACCAAGATTTGAGGAATACACCTGCGACCTTGACATTTCAGCAAAGGAAAAGACTACTGCTTTTAACGAAGGCAGTACAGGATCTCTAGCTGTATGTAACAAGGTGGGTAATCAGCAGATAGACTTGGTCGTGAAGAGCTTTTCTAAAGAAAGGGGTCATGGCAATATAGATCTTAGTGCATCTTTGACTTCTATAGAAGAAACTACTAGGGACAAAACTTCTGAAGATGCAGGGAATCAGAATGAATTTATCCATTCAGATGCAGAATATCAGGAGGCTGGCAGCCATCTTGTCAACTCTGATTCAATTTACGGTATGTCCACTGAGTCAGGGAATCAGAATGAATTTATCCATGCAGATGCAGAACATCAGGAGGTTGGCAGCCATGTTGTCAACTCCGATTCAAATTTCGATATGTCCACTGATAATATGATCTGTGAGATGGGAGATGGAAGTGCTAATGCTGGCAGTGCAGTGAGTCAGGGATCTAAAGAGGTTTTAGCCACCGTGCTACCTGAAAGGGCTAATCTCTCCCCAGACAGTTGTTTGGACAATATTCTACCCATAAGTACATGTAATAGCAATAATTGCTTGGAAAATCAAGGTTTCCCGGAAATAGCTCAGCACATGACATTGAACGAGGAGGTAGTACCAAATGAAGACATTTCAACTTCAGTTCATTCAGATGTGGAGTCCCTGGGAAATCCTGTAGGCCCAGCAGAGGTGCAGAGATCAGAGTGTGACATATTACAGGGTGCTCCTAGATCACCTAAGCAGAATGTAGGCTCAGCACAGGAGCAGAGACCTGAGCAGTCCATGTCACAAGGTGCTGCTAGATCGCCAATGATCAGAACTCCAATTCCAGATGGTGCTCCTAGCTTGCGTAATCAGCATTTAGGCTCAGCACAGGAGCAGAGATCTGAGCATTTCATGTTAAAGGGCGCTACTAGATCGCCAATGATCAGAACTCCAATTCCATATGGACATTATTCTCCTCTTACCCGTGGCAAGGCCAAGTCATCATCAGTTTCAACACCTGAATCTCTCAAACTGAGAAGAACTAGATCAGGTCGCGTGGTAGTTCCCACATTGGATCCTGGATGCCAAAGGATCGTCTATGACAGAGACGGTTTGGTTTCAGGTGTGGCTGGCTTAGAGTTTGAATCACCACCTCTCAAAGGGAACGAGTCAAGGACTCCTGAGAGCAAGAGAAGGGTCCGTTGAGCAACTTCCATAGCCTGCGCATCGATTATATCCTCTTTGAAAATGTGGGCTCCATTCTGCATTTTTGATGATCTATCTGGAATCCGCTCGGTATAGGATGAGGATGGTGGATTTTGTATATACGCCTGGCAGTTTAGCTTGCAGATAATTGTTGTTTGGTAGCTGATTGTAGGCCTTGGTATGGACCAATGTTGCTAGTTTCGAAATGACCAATGTTGCTGGTTTCATGTCAGCACTTGCAGCACCTCTTCACCTCTATGGTGGCCATCAACATTAACTAGCTAGCTAGTTTGTTCTGCATCACCAGTCGCAGGTGTCTGATACAGCTAATGTATTTTGATTCCTGGAACTGTGCTATCCACACCAATATAAGACCCA ]
[-] EMBL CB635115             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTCACAAGGTGCTGCTAGATCGCCAATGATCAGAACTCCAATTCCAGATGGTGCTCCTAGCTTGCGGAATCAGCATTTAGGCTCAGCACAGGAGCAGAGATCTGAGCATTTCATGTTAAAGGGCGCTACTAGATCGCCAATGATCAGAACTCCAATTCCATATGGACATTATTCTCCTCTTACCCGTGGCAAGGCCAAGTCATCATCAGTTTCAACACCTGAATCTCTCAAACTGAGAAGAACTAGATCAGGTCGCGTGGTAGTTCCCACATTGGATCCTGGATGCCAAAGGATCGTCTATGACAGAGACGGTTTGGTTTCAGGTGTGGCTGGCTTAGAGTTTGAATCACCACCTCTCAAAGGGAACGAGTCAAGGACTCCTGAGAGCAAGAGAAGGGTCCGTTGAGCAACTTCCATAGCCTGCGCATCGATTATATCCTCTTTGAAAATGTGGGCTCCATTCTGCATTTTTGATGATCTATCTGGAATCCGCTCGGTATAGGATGAGGATGGTGGATTTTGTATATACGCCTGGCAGTTTAGCTTGCAGATAATTGTTGTTTGGTAGCTGATTGTAGGCCTTGGTATGGACCAATGTTGCTAGTTTCGAAATGACCAATGTTGCTGGTTTCATGTCAGCACTTGCAGCACCTCTTCACCTCTATGGTGGCCATCAACATTAACTAGCTAGCTAGTTTGTTCTGCATCACCAGTCGCAGGTGTCTGATACAGCTAATGTATTTTGATTCCTGGAACTGTGCTATCCAGACCAATATAAGACCCAT]




>consensus_6061#0
AAAAATACATATGGGCACCGAACCCTCCCAAACCCCTACCCCCCCGCCGCCGCCGCCGCC
GGCGAGCCCTCGGCGGCGCGCCCCGCAGCCGGCCACCATCCTCAGCCCTTCCTTCTCGCG
GAACCCTCTACGCGCCACCGCCGCCTCGGCCTCCGCCTCCGCCGGCCCCGTCCCCTCCCC
CTCCTCATCCTCCGACTGCGAGGAGCACCCCTGCGTGGAGCTGTTCGATTGGTGGCTGAA
GAGGGTGGAGGGGGACGACCGGAAGGTCCGCATCGCCGGCCACACGGAAAGGAACCACAA
ACCCCATCTATTCACTTCTGCACCCATTGTAAAACGGCATAAGGCTTGTATGCTTGAAGC
TGAAGACAGCATCATAGTGTTAATTGATGGCCCGTTGGACCTTTCGCAAATGGAAAATAA
TGGATATTCGCTTGAGGTCTGCGAAAAATTCATGACTGGATTTCCATGCTTGTGGGAGAG
TTACAACTTAGGATCTCAACAGAGCTGTTCTTACACTAGCATTTCACGAGATGGCCGAAC
TAAATTTTATTTGGAGCGATTCCAGATAGGAAACTTTATTGATAAAGTTGGATCTTCTTT
CCTAGCGAACCTTCTTAACAACTCAAGAAGTTCCTCAGGTAATGATGCTGATTCCTTTGA
AAAAGGTTCCTATTTGTCAAACAAAAAACCAAGATTTGAGGAATACACCTGCGACCTTGA
CATTTCAGCAAAGGAAAAGACTACTGCTTTTAACGAAGGCAGAACAGGATCTCTAGCTGT
ATGTAACAAGGTGGGTAATCAGCAGATAGACTTGGTCGTGAAGAGCTTTTCTAAAGAAAG
GGGTCATGGCAATATAGATCTTAGTGCATCTTTGACTTCTATAGAAGAAACTACTAGGGA
CAAAACTTCTGAAGATGCAGGGAATCAGAATGAATTTATCCATTCAGATGCAGAATATCA
GGAGGCTGGCAGCCATCTTGTCAACTCTGATTCAATTTACGGTATGTCCACTGAGTCAGG
GAATCAGAATGAATTTATCCATGCAGATGCAGAACATCAGGAGGTTGGCAGCCATGTTGT
CAACTCCGATTCAAATTTCGATATGTCCACTGATAATATGATCTGTGAGATGGGAGATGG
AAGTGCTAATGCTGGCAGTGCAGTGAGTCAGGGATCTAAAGAGGTTTTAGCCACCGTGCT
ACCTGAAAGGGCTAATCTCTCCCCAGACAGTTGTTTGGACAATATTCTACCCATAAGTAC
ATGTAATAGCAATAATTGCTTGGAAAATCAAGGTTTCCCGGAAATAGCTCAGCACATGAC
ATTGAACGAGGAGGTAGTACCAAATGAAGACATTTCAACTTCAGTTCATTCAGATGTGGA
GTCCCTGGGAAATCCTGTAGGCCCAGCAGAGGTGCAGAGATCAGAGTGTGACATATTACA
GGGTGCTCCTAGATCACCTAAGCAGAATGTAGGCTCAGCACAGGAGCAGAGACCTGAGCA
GTCCATGTCACAAGGTGCTGCTAGATCGCCAATGATCAGAACTCCAATTCCAGATGGTGC
TCCTAGCTTGCGTAATCAGCATTTAGGCTCAGCACAGGAGCAGAGATCTGAGCATTTCAT
GTTAAAGGGCGCTACTAGATCGCCAATGATCAGAACTCCAATTCCATATGGACATTATTC
TCCTCTTACCCGTGGCAAGGCCAAGTCATCATCAGTTTCAACACCTGAATCTCTCAAACT
GAGAAGAACTAGATCAGGTCGCGTGGTAGTTCCCACATTGGATCCTGGATGCCAAAGGAT
CGTCTATGACAGAGACGGTTTGGTTTCAGGTGTGGCTGGCTTAGAGTTTGAATCACCACC
TCTCAAAGGGAACGAGTCAAGGACTCCTGAGAGCAAGAGAAGGGTCCGTTGAGCAACTTC
CATAGCCTGCGCATCGATTATATCCTCTTTGAAAATGTGGGCTCCATTCTGCATTTTTGA
TGATCTATCTGGAATCCGCTCGGTATAGGATGAGGATGGTGGATTTTGTATATACGCCTG
GCAGTTTAGCTTGCAGATAATTGTTGTTTGGTAGCTGATTGTAGGCCTTGGTATGGACCA
ATGTTGCTAGTTTCGAAATGACCAATGTTGCTGGTTTCATGTCAGCACTTGCAGCACCTC
TTCACCTCTATGGTGGCCATCAACATTAACTAGCTAGCTAGTTTGTTCTGCATCACCAGT
CGCAGGTGTCTGATACAGCTAATGTATTTTGATTCCTGGAACTGTGCTATCCACACCAAT
ATAAGACCCAT
clustalw multiple alignements is not computed in this case