cluster # 6083

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Oryza sativa
cluster # 6083 cluster # 6083 Sequences # 3 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6083#0 length = 1683 sequences # 1

consensus_6083#1 length = 1643 sequences # 1
consensus_6083#2 length = 615 sequences # 1

consensusID : consensus_6083#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1683
fasta sequence

                              [GCCAACAATCCACAAAAGCCTAGCCATCCGCTCACCCCCTTCGCTTCGGTGACTCTCTCCCCATCTCCTTCCCCTAGGCCGCCGCTATGAAACCTCCGGTCGCCATGGATTCTGCCGGAGGAAACTCAGGCAAGCTGTTCGACGAAATGCCTCCCCGTTCGTCGGGTCGAGGATGCCCCCGGAGCCCGTCACCGGCGGCGATGGAACACGGCTTCGACAGACACTGTGTGGTGCTCGGCGGAATGCCCAAGAAGAGATCAAGGTTGGAGTTGGGCGCGGGGGTGTCACTGTGGGCAGGCCTTCAACCGGACATTCTGGGAATCGTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGATGCGGTCCGTGTGCCGTCACTGGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGATGCTTCCTGGTTTCAAGCTCTCGAGCCTATCAGACAAGGGGGATTTGATGCCTGTGCGGTGCGTGCCGGTGCCTAAGGAAGTTGCAGCTGATGATCTCCGATGTGTGGGTTATTTTGATGGATGGCTTGTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGACTGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATCCGCCTACCGCAGCTGTGCCATATGCGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCATCAATGGTTCTGGTGAGGTCTATTTTCGTGTCAATGATATATACACAATGTCACTATGCAATGTGGCACTATCTGCTTCACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTTCCTCTGACCACAAGTGTGCATCAAAACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGCATATTTGCGCTGGCGTTGACATTGATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGCTGTATGTGCTCCAAAGATATAAGATACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATGGTGGGCTCATGGTCTCTCGCGTTAAGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCTACCAGGGAGGTGGTGCAATAAGTTGCAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAGCGACAATTACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTGCACTGGATGTTAACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCTGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGACTTTGATGTGGACCAGTTGAGTCGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGATGCTGCACAGCAAAACTGATCTAACTGGTTGTTTTGTGCCGCTAGTTGCTCTTATCAAGACAGAGCTTACTTGTCATTAGACTCTTTGGTCATGACTATAACATGTATAATCTGCTATGCTCTTGTCACAATTCTCAGATTTTTCTTTCTTTCCGAAAAATATTAATATGGAAGGTTCTACTTCAACATTTAA]

[+] EMBL AK064343             [GCCAACAATCCACAAAAGCCTAGCCATCCGCTCACCCCCTTCGCTTCGGTGACTCTCTCCCCATCTCCTTCCCCTAGGCCGCCGCTATGAAACCTCCGGTCGCCATGGATTCTGCCGGAGGAAACTCAGGCAAGCTGTTCGACGAAATGCCTCCCCGTTCGTCGGGTCGAGGATGCCCCCGGAGCCCGTCACCGGCGGCGATGGAACACGGCTTCGACAGACACTGTGTGGTGCTCGGCGGAATGCCCAAGAAGAGATCAAGGTTGGAGTTGGGCGCGGGGGTGTCACTGTGGGCAGGCCTTCAACCGGACATTCTGGGAATCGTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGATGCGGTCCGTGTGCCGTCACTGGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGATGCTTCCTGGTTTCAAGCTCTCGAGCCTATCAGACAAGGGGGATTTGATGCCTGTGCGGTGCGTGCCGGTGCCTAAGGAAGTTGCAGCTGATGATCTCCGATGTGTGGGTTATTTTGATGGATGGCTTGTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGACTGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATCCGCCTACCGCAGCTGTGCCATATGCGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCATCAATGGTTCTGGTGAGGTCTATTTTCGTGTCAATGATATATACACAATGTCACTATGCAATGTGGCACTATCTGCTTCACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTTCCTCTGACCACAAGTGTGCATCAAAACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGCATATTTGCGCTGGCGTTGACATTGATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGCTGTATGTGCTCCAAAGATATAAGATACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATGGTGGGCTCATGGTCTCTCGCGTTAAGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCTACCAGGGAGGTGGTGCAATAAGTTGCAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAGCGACAATTACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTGCACTGGATGTTAACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCTGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGACTTTGATGTGGACCAGTTGAGTCGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGATGCTGCACAGCAAAACTGATCTAACTGGTTGTTTTGTGCCGCTAGTTGCTCTTATCAAGACAGAGCTTACTTGTCATTAGACTCTTTGGTCATGACTATAACATGTATAATCTGCTATGCTCTTGTCACAATTCTCAGATTTTTCTTTCTTTCCGAAAAATATTAATATGGAAGGTTCTACTTCAACATTTAA]




>consensus_6083#0
GCCAACAATCCACAAAAGCCTAGCCATCCGCTCACCCCCTTCGCTTCGGTGACTCTCTCC
CCATCTCCTTCCCCTAGGCCGCCGCTATGAAACCTCCGGTCGCCATGGATTCTGCCGGAG
GAAACTCAGGCAAGCTGTTCGACGAAATGCCTCCCCGTTCGTCGGGTCGAGGATGCCCCC
GGAGCCCGTCACCGGCGGCGATGGAACACGGCTTCGACAGACACTGTGTGGTGCTCGGCG
GAATGCCCAAGAAGAGATCAAGGTTGGAGTTGGGCGCGGGGGTGTCACTGTGGGCAGGCC
TTCAACCGGACATTCTGGGAATCGTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGA
GGATGCGGTCCGTGTGCCGTCACTGGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGC
CGCTGCCCCTGCTGATGCTTCCTGGTTTCAAGCTCTCGAGCCTATCAGACAAGGGGGATT
TGATGCCTGTGCGGTGCGTGCCGGTGCCTAAGGAAGTTGCAGCTGATGATCTCCGATGTG
TGGGTTATTTTGATGGATGGCTTGTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGT
ACAACAGAGATGCCGATGGTGACTGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATCC
GCCTACCGCAGCTGTGCCATATGCGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCC
GCATCATCAATGGTTCTGGTGAGGTCTATTTTCGTGTCAATGATATATACACAATGTCAC
TATGCAATGTGGCACTATCTGCTTCACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTT
CCTCTGACCACAAGTGTGCATCAAAACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGC
ATATTTGCGCTGGCGTTGACATTGATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGC
TGTATGTGCTCCAAAGATATAAGATACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATG
GTGGGCTCATGGTCTCTCGCGTTAAGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCT
ACCAGGGAGGTGGTGCAATAAGTTGCAATATGGTTGTGTGGCGTGGAGAGCTATTATTAA
TCATCAGACACTACAGCGACAATTACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTG
CACTGGATGTTAACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACT
GTATCTTTGTTGGCTTAGGTGGCTGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTG
AAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTGTATA
GCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGACTTTGATG
TGGACCAGTTGAGTCGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGATGCTGCACAG
CAAAACTGATCTAACTGGTTGTTTTGTGCCGCTAGTTGCTCTTATCAAGACAGAGCTTAC
TTGTCATTAGACTCTTTGGTCATGACTATAACATGTATAATCTGCTATGCTCTTGTCACA
ATTCTCAGATTTTTCTTTCTTTCCGAAAAATATTAATATGGAAGGTTCTACTTCAACATT
TAA

consensusID : consensus_6083#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1643
fasta sequence

                              [TCTCCCCATCTCCTTCCCCTAGGCCGCCGCTATGAAACCTCCGGTCGCCATGGATTCTGCCGGAGGAAACTCAGGTGAGAGCTACCCATCTCACCTCGGCCTGTTCGCGCATCTCACAGTGCGGAGGCTTGGATCTGATCTGATCCACCGGTGGCTGTTGTGCAGGCAAGCTGTTCGACGAAATGCCTCCCCGTTCGTCGGATCGAGGATGCCCCCGGAGCCCGTCACCGGCGGCGATGGAACACGGCTTCGACAGACACTGTGTGGTGCTCGGCGGAATGCCCAAGAAGAGATCAAGGTTGGAGTTGGACGCGGGGGTGTCACTGTGGGCAGGCCTTCAACCGGACATTCTGGGAATCGTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGATGCGGTCCGTGTGCCGTCACTGGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGATGCTTCCTGGTTTCAAGTTCTCGAGCCTATCAGACAAGGGGGATTTGATGCCTGTGCGGTGCGTGCCGGTGCCTAAGGAAGTTGCAGCTGATGATCTCCGATGTGTGGGTTATTTTGATGGATGGCTTGTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGACTGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATCCGCCTACCGCAGCTGTGCCATATGCGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCATCAATGGTTCTGGTGAGGTCTATTTTCGTGTCAATGATATATACACAATGTCACTATGCAATGTGGCACTATCTGCTTCACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTTCCTCTGACCACAAGTGTGCATCAAAACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGCATATTTGCGCTGGCGTTGACATTGATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGCTGTATGTGCTCCAAAGATATAAGATACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATGGTGGGCTCATGGTCTCTCGCGTTAAGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCTACCAGGGAGGTGGTGCAATAAGTTGTAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAGCGACAATTACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTGCACTGGATGTTAACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCTGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGACTTTGATGTGGACCAGTTGAGTCGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGATGCTGCACAGCAAAACTGATCTAACTGGTTGTTTTGTGCCGCTAGTTGCTCTTATCAAGACAGAGCTTACTTGTCATTAGACTCTTTGGTCATGACTATAACATGTATAATCTGCTA]

[+] EMBL AK073994             [TCTCCCCATCTCCTTCCCCTAGGCCGCCGCTATGAAACCTCCGGTCGCCATGGATTCTGCCGGAGGAAACTCAGGTGAGAGCTACCCATCTCACCTCGGCCTGTTCGCGCATCTCACAGTGCGGAGGCTTGGATCTGATCTGATCCACCGGTGGCTGTTGTGCAGGCAAGCTGTTCGACGAAATGCCTCCCCGTTCGTCGGATCGAGGATGCCCCCGGAGCCCGTCACCGGCGGCGATGGAACACGGCTTCGACAGACACTGTGTGGTGCTCGGCGGAATGCCCAAGAAGAGATCAAGGTTGGAGTTGGACGCGGGGGTGTCACTGTGGGCAGGCCTTCAACCGGACATTCTGGGAATCGTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGATGCGGTCCGTGTGCCGTCACTGGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGATGCTTCCTGGTTTCAAGTTCTCGAGCCTATCAGACAAGGGGGATTTGATGCCTGTGCGGTGCGTGCCGGTGCCTAAGGAAGTTGCAGCTGATGATCTCCGATGTGTGGGTTATTTTGATGGATGGCTTGTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGACTGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATCCGCCTACCGCAGCTGTGCCATATGCGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCATCAATGGTTCTGGTGAGGTCTATTTTCGTGTCAATGATATATACACAATGTCACTATGCAATGTGGCACTATCTGCTTCACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTTCCTCTGACCACAAGTGTGCATCAAAACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGCATATTTGCGCTGGCGTTGACATTGATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGCTGTATGTGCTCCAAAGATATAAGATACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATGGTGGGCTCATGGTCTCTCGCGTTAAGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCTACCAGGGAGGTGGTGCAATAAGTTGTAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAGCGACAATTACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTGCACTGGATGTTAACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCTGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGACTTTGATGTGGACCAGTTGAGTCGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGATGCTGCACAGCAAAACTGATCTAACTGGTTGTTTTGTGCCGCTAGTTGCTCTTATCAAGACAGAGCTTACTTGTCATTAGACTCTTTGGTCATGACTATAACATGTATAATCTGCTA]




>consensus_6083#1
TCTCCCCATCTCCTTCCCCTAGGCCGCCGCTATGAAACCTCCGGTCGCCATGGATTCTGC
CGGAGGAAACTCAGGTGAGAGCTACCCATCTCACCTCGGCCTGTTCGCGCATCTCACAGT
GCGGAGGCTTGGATCTGATCTGATCCACCGGTGGCTGTTGTGCAGGCAAGCTGTTCGACG
AAATGCCTCCCCGTTCGTCGGATCGAGGATGCCCCCGGAGCCCGTCACCGGCGGCGATGG
AACACGGCTTCGACAGACACTGTGTGGTGCTCGGCGGAATGCCCAAGAAGAGATCAAGGT
TGGAGTTGGACGCGGGGGTGTCACTGTGGGCAGGCCTTCAACCGGACATTCTGGGAATCG
TGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGATGCGGTCCGTGTGCCGTCACT
GGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGATGCTTCCTG
GTTTCAAGTTCTCGAGCCTATCAGACAAGGGGGATTTGATGCCTGTGCGGTGCGTGCCGG
TGCCTAAGGAAGTTGCAGCTGATGATCTCCGATGTGTGGGTTATTTTGATGGATGGCTTG
TAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGACT
GCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATCCGCCTACCGCAGCTGTGCCATATGC
GTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCATCAATGGTTCTGGTGAGG
TCTATTTTCGTGTCAATGATATATACACAATGTCACTATGCAATGTGGCACTATCTGCTT
CACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTTCCTCTGACCACAAGTGTGCATCAA
AACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGCATATTTGCGCTGGCGTTGACATTG
ATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGCTGTATGTGCTCCAAAGATATAAGA
TACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATGGTGGGCTCATGGTCTCTCGCGTTA
AGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCTACCAGGGAGGTGGTGCAATAAGTT
GTAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAGCGACAATT
ACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTGCACTGGATGTTAACACAAACCCTT
ATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCT
GCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCC
CTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGT
CCTTTGCCGTCAAACTATTAGCTTCCGACTTTGATGTGGACCAGTTGAGTCGTGATTTCC
CGGTGTGGTTACTTCCTACCGAATGATGCTGCACAGCAAAACTGATCTAACTGGTTGTTT
TGTGCCGCTAGTTGCTCTTATCAAGACAGAGCTTACTTGTCATTAGACTCTTTGGTCATG
ACTATAACATGTATAATCTGCTA

consensusID : consensus_6083#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 615
fasta sequence

                              [TTAATCATCAGACACTACAATGGCGATTACCGTAAGAGACAACTTCATAAAGTTGAAGTGTTTGCACTGGATGTTGACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCTGTAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGAATTTGATGTGGACCAGTTGAGTTGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGATGCTGCGCAGCAAAGCTGATCTAGCTGGGAGGGTGGTCAAGAGCTTACCTTTCATTAGACTCCTTGGTCGAGACTATAATGTGTATTATCTGCTATGTTCATGTTGCAACTCTCAGATTATCTTTTGTATTTCCTGTTGAACTAGCAACCATGATTTGGTGCTCTCTTTCNGAGTCTTTCTTGTTTCTGTTTTTCTGGGACAGTGGTACTGGTGTTGTCTGACTGAGGACATATAAAGGTTGGGTGCATTATTCTGCTGTT]

[+] EMBL CA757644             [TTAATCATCAGACACTACAATGGCGATTACCGTAAGAGACAACTTCATAAAGTTGAAGTGTTTGCACTGGATGTTGACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGCTGTAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGAATTTGATGTGGACCAGTTGAGTTGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGATGCTGCGCAGCAAAGCTGATCTAGCTGGGAGGGTGGTCAAGAGCTTACCTTTCATTAGACTCCTTGGTCGAGACTATAATGTGTATTATCTGCTATGTTCATGTTGCAACTCTCAGATTATCTTTTGTATTTCCTGTTGAACTAGCAACCATGATTTGGTGCTCTCTTTCNGAGTCTTTCTTGTTTCTGTTTTTCTGGGACAGTGGTACTGGTGTTGTCTGACTGAGGACATATAAAGGTTGGGTGCATTATTCTGCTGTT]




>consensus_6083#2
TTAATCATCAGACACTACAATGGCGATTACCGTAAGAGACAACTTCATAAAGTTGAAGTG
TTTGCACTGGATGTTGACACAAACCCTTATGGACTAACTGAGATTCACAGCTTGAATGGT
GACTGTATCTTTGTTGGCTTAGGTGGCTGTAAGTCCTTTCCTGCTGGTCTACATCATGGA
GTTGAAGGTGACCATATCTACTTTGTCCCTGATGATTGGAAGCCTTATGATACATTTGTG
TATAGCATGAGAGATGGTAAGATGAGGTCCTTTGCCGTCAAACTATTAGCTTCCGAATTT
GATGTGGACCAGTTGAGTTGTGATTTCCCGGTGTGGTTACTTCCTACCGAATGATGCTGC
GCAGCAAAGCTGATCTAGCTGGGAGGGTGGTCAAGAGCTTACCTTTCATTAGACTCCTTG
GTCGAGACTATAATGTGTATTATCTGCTATGTTCATGTTGCAACTCTCAGATTATCTTTT
GTATTTCCTGTTGAACTAGCAACCATGATTTGGTGCTCTCTTTCNGAGTCTTTCTTGTTT
CTGTTTTTCTGGGACAGTGGTACTGGTGTTGTCTGACTGAGGACATATAAAGGTTGGGTG
CATTATTCTGCTGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6083#0      ----------------------------GCCA-ACAATCCACAAAAGCCTAGCCATCCGC 31
consensus_6083#1      TCTCCCCATCTCCTTCCCCTAGGCCGCCGCTATGAAACCTCCGGTCGCCATGGATTCTGC 60
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      TC-ACCCCCTTCGCTTCGGTGACTCTCTCCCCATCTCCTTCCCCTAGGCCGCCGC----T 86
consensus_6083#1      CGGAGGAAACTCAGGTGAGAGCTACCCATCTCACCTCGGCCTGTTCGCGCATCTCACAGT 120
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      ATGAAACCTCCGGTCGCCATGGATTCTGCCGGAGGAAACT---CAGGCAAGCTGTTCGAC 143
consensus_6083#1      GCGGAGGCTTGGATC-TGATCTGATCCACCGGTGGCTGTTGTGCAGGCAAGCTGTTCGAC 179
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      GAAATGCCTCCCCGTTCGTCGGGTCGAGGATGCCCCCGGAGCCCGTCACCGGCGGCGATG 203
consensus_6083#1      GAAATGCCTCCCCGTTCGTCGGATCGAGGATGCCCCCGGAGCCCGTCACCGGCGGCGATG 239
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      GAACACGGCTTCGACAGACACTGTGTGGTGCTCGGCGGAATGCCCAAGAAGAGATCAAGG 263
consensus_6083#1      GAACACGGCTTCGACAGACACTGTGTGGTGCTCGGCGGAATGCCCAAGAAGAGATCAAGG 299
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      TTGGAGTTGGGCGCGGGGGTGTCACTGTGGGCAGGCCTTCAACCGGACATTCTGGGAATC 323
consensus_6083#1      TTGGAGTTGGACGCGGGGGTGTCACTGTGGGCAGGCCTTCAACCGGACATTCTGGGAATC 359
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      GTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGATGCGGTCCGTGTGCCGTCAC 383
consensus_6083#1      GTGCTCCACTTCCTTCCATGCCTTGCCGACCGTGCGAGGATGCGGTCCGTGTGCCGTCAC 419
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      TGGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGATGCTTCCT 443
consensus_6083#1      TGGCGAGCCAGCGCGAACGGCCACGTCCTGCCACCGCCGCTGCCCCTGCTGATGCTTCCT 479
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      GGTTTCAAGCTCTCGAGCCTATCAGACAAGGGGGATTTGATGCCTGTGCGGTGCGTGCCG 503
consensus_6083#1      GGTTTCAAGTTCTCGAGCCTATCAGACAAGGGGGATTTGATGCCTGTGCGGTGCGTGCCG 539
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      GTGCCTAAGGAAGTTGCAGCTGATGATCTCCGATGTGTGGGTTATTTTGATGGATGGCTT 563
consensus_6083#1      GTGCCTAAGGAAGTTGCAGCTGATGATCTCCGATGTGTGGGTTATTTTGATGGATGGCTT 599
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      GTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGAC 623
consensus_6083#1      GTAGGTGTGACTCCTAACAAGGATCGCAGCGACGAGTACAACAGAGATGCCGATGGTGAC 659
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      TGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATCCGCCTACCGCAGCTGTGCCATATG 683
consensus_6083#1      TGCTTCCTGGTGAATGTTTTCTCTCGCAAGGTCATCCGCCTACCGCAGCTGTGCCATATG 719
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      CGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCATCAATGGTTCTGGTGAG 743
consensus_6083#1      CGTTACAATTTTCCTGCTTACTCCAGTAAGACCCTCCGCATCATCAATGGTTCTGGTGAG 779
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      GTCTATTTTCGTGTCAATGATATATACACAATGTCACTATGCAATGTGGCACTATCTGCT 803
consensus_6083#1      GTCTATTTTCGTGTCAATGATATATACACAATGTCACTATGCAATGTGGCACTATCTGCT 839
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      TCACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTTCCTCTGACCACAAGTGTGCATCA 863
consensus_6083#1      TCACCTGACTCAAGAGGCAAGTACATTGTAGCTGCTTCCTCTGACCACAAGTGTGCATCA 899
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      AAACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGCATATTTGCGCTGGCGTTGACATT 923
consensus_6083#1      AAACTTGCTCTCTGGCAGCCTGGGATGATTTCATGGCATATTTGCGCTGGCGTTGACATT 959
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      GATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGCTGTATGTGCTCCAAAGATATAAG 983
consensus_6083#1      GATGGCCCAAGAGATCTCACTTTTTACCTTGGGAAGCTGTATGTGCTCCAAAGATATAAG 1019
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      ATACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATGGTGGGCTCATGGTCTCTCGCGTT 1043
consensus_6083#1      ATACGCCTCTTTGCTTTTGAAGTTGGGGAGGACAATGGTGGGCTCATGGTCTCTCGCGTT 1079
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      AAGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCTACCAGGGAGGTGGTGCAATAAGT 1103
consensus_6083#1      AAGCGTTGTCTGAGTGCGCTGCCTCTCCATCATCCCTACCAGGGAGGTGGTGCAATAAGT 1139
consensus_6083#2      ------------------------------------------------------------
                                                                                  

consensus_6083#0      TGCAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAGCGACAAT 1163
consensus_6083#1      TGTAATATGGTTGTGTGGCGTGGAGAGCTATTATTAATCATCAGACACTACAGCGACAAT 1199
consensus_6083#2      ---------------------------------TTAATCATCAGACACTACAATGGCGAT 27
                                                       *******************  * * **

consensus_6083#0      TACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTGCACTGGATGTTAACACAAACCCT 1223
consensus_6083#1      TACCGTGACCGAGAAGTTCTTAAAGTTGAAGTGTTTGCACTGGATGTTAACACAAACCCT 1259
consensus_6083#2      TACCGTAAGAGACAACTTCATAAAGTTGAAGTGTTTGCACTGGATGTTGACACAAACCCT 87
                      ****** *  ** ** *** **************************** ***********

consensus_6083#0      TATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGC 1283
consensus_6083#1      TATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGC 1319
consensus_6083#2      TATGGACTAACTGAGATTCACAGCTTGAATGGTGACTGTATCTTTGTTGGCTTAGGTGGC 147
                      ************************************************************

consensus_6083#0      TGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTC 1343
consensus_6083#1      TGCAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTC 1379
consensus_6083#2      TGTAAGTCCTTTCCTGCTGGTCTACATCATGGAGTTGAAGGTGACCATATCTACTTTGTC 207
                      ** *********************************************************

consensus_6083#0      CCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGG 1403
consensus_6083#1      CCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGG 1439
consensus_6083#2      CCTGATGATTGGAAGCCTTATGATACATTTGTGTATAGCATGAGAGATGGTAAGATGAGG 267
                      ************************************************************

consensus_6083#0      TCCTTTGCCGTCAAACTATTAGCTTCCGACTTTGATGTGGACCAGTTGAGTCGTGATTTC 1463
consensus_6083#1      TCCTTTGCCGTCAAACTATTAGCTTCCGACTTTGATGTGGACCAGTTGAGTCGTGATTTC 1499
consensus_6083#2      TCCTTTGCCGTCAAACTATTAGCTTCCGAATTTGATGTGGACCAGTTGAGTTGTGATTTC 327
                      ***************************** ********************* ********

consensus_6083#0      CCGGTGTGGTTACTTCCTACCGAATGATGCTGCACAGCAAAACTGATCTAACTGGTTGTT 1523
consensus_6083#1      CCGGTGTGGTTACTTCCTACCGAATGATGCTGCACAGCAAAACTGATCTAACTGGTTGTT 1559
consensus_6083#2      CCGGTGTGGTTACTTCCTACCGAATGATGCTGCGCAGCAAAGCTGATCTAGCTGGGAG-- 385
                      ********************************* ******* ******** ****  *  

consensus_6083#0      TTGTGCCGCTAGTTGCTCTTATCAAGACAGAGCTTACTTGTCATTAGACTCTTTGGTCAT 1583
consensus_6083#1      TTGTGCCGCTAGTTGCTCTTATCAAGACAGAGCTTACTTGTCATTAGACTCTTTGGTCAT 1619
consensus_6083#2      -------GGTGGTCA-------------AGAGCTTACCTTTCATTAGACTCCTTGGTCGA 425
                             * * **               ********* * *********** ******  

consensus_6083#0      GACTATAACATGTATAATCTGCTATGCTCTTGTCACAATTCTCAGATTTTTCTTTCTTTC 1643
consensus_6083#1      GACTATAACATGTATAATCTGCTA------------------------------------ 1643
consensus_6083#2      GACTATAATGTGTATTATCTGCTATGTTCATGTTGCAACTCTCAGATTATCTTTTGTATT 485
                      ********  ***** ********                                    

consensus_6083#0      CGAAAAATATTAATATGGAAGGTTCTACTTCAACATTTAA-------------------- 1683
consensus_6083#1      ------------------------------------------------------------
consensus_6083#2      TCCTGTTGAACTAGCAACCATGATTTGGTGCTCTCTTTCNGAGTCTTTCTTGTTTCTGTT 545
                                                                                  

consensus_6083#0      ------------------------------------------------------------
consensus_6083#1      ------------------------------------------------------------
consensus_6083#2      TTTCTGGGACAGTGGTACTGGTGTTGTCTGACTGAGGACATATAAAGGTTGGGTGCATTA 605
                                                                                  

consensus_6083#0      ----------
consensus_6083#1      ----------
consensus_6083#2      TTCTGCTGTT 615