cluster # 6084

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Oryza sativa
cluster # 6084 cluster # 6084 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6084#0 length = 3162 sequences # 3
consensusID : consensus_6084#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3162
fasta sequence
                              [CATGGCGCCGCCACAAATGTATGAGCNCCGCCTCCTCGCCNCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGNCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCAACTCANCTTATTTCATCAAACACTTTTCCGCAACACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGGT-AATGTCATGTGAATGNTG-TTTTTCTTATGTCGGACGGACCATTGGCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTACCTCAAGATCCACTCCATCTCACCTGGACCATTTTTGGTCTTATGTCCTCTAAGTGTCACCGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGTTGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATCTTCATCGTCATCTCATTCCACTGAGTTACCGTTTGATGTCATGATGACAACCTATGACATAGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGAGGCCCAACGTCTTAAAAACCCATCCAGCGTACTGTATAATGTCCTTGAGCAACGCTTTATCATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATGGGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTACTTTCAAGCAATCAGGTGATTCATTGACAGGTGGCGAAACTAATAAAACGGACAAACAGTTTAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAATTCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGATGGTACCTCTGACACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTACATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTTATACAACTGCGAAAAGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGAGCATTTGGTTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCATGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCAGGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGAGGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGATGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCTTAATCTCATTGGTGCTGATACTGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGACAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTATTATCAATAAATTTGGTATCACAACGCACAATTGAAGAGGTCATCATGCGAAGAGCAGAAAGAAAACTTAAGCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGAAAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGATACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTATGTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGAAAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGTTACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATCCTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGAAAGGCAAAGAATAGCACCTGAAGAAAAGTTCCTAAAACGTGAAGCTATTAAGAAAAAGGTGGAAGAAAAGAGATTAGCCAAATGGGAATCCTTGGGGTACCAGACATTAAAGATCAAAGATCCTGACATCTTACCGAACCAGAATATTCCAGACTCTGGATCCGTCCAACTTGTATATGGAGATTGCACTAATCCTTCAGTAGTTTGCCCTGCAAAGCCTGCCATCATATTCAGTTGTGTTGATAATTCAGGAACC-TGGGGACATGGAGGAATGTT-CGATGCTTTGG-CCAATCTCTCAACATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCTTCACTTGATTCAGTTAGATGAAG-CCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGTCGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTCCATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGCGAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATCAGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACATCTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAATGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTGTAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCTTGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGAACCGAAAACGAAAAATGTTTGCCTGAACAAAAAAAAAAAAAA]

[+] EMBL C26323               [CATGGCGCCGCCACAAATGTATGAGCNCCGCCTCCTCGCCNCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGNCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCAACTCANCTTATTTCATCAAACACTTTTCCGCAACACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGGTNAATGTCATGTGAATGNTG TTTTTCTTATGTCGGACGGACCATTGGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK066228             [                          gCCGCCTCCTCGCCGCCGCCTCCCTCCTCCTCTCCGCCGATGCGCAGGGCCAACCACCCCACGCCGCCGCCCAACTCGGAGTCGGAGTCACGGCCGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGGCGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGCCGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTTGTTCTATGCTGTTTCACCTCACCTTATTTCATCAAACACTTTTCCGCACCACCATTTTTCGTTACTGTTAATAATGTGTAATCAAGCT CATGTCATGTGACTGCTGTTTTTTCTTATGTCGGACGGACCATGGCCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTACCTCAAGATCCACTCCATCTCACCTGGACCATTTTTGGTCTTATGTCCTCTAAGTGTCACCGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGTTGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATCTTCATCGTCATCTCATTCCACTGAGTTACCGTTTGATGTCATGATGACAACCTATGACATAGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGAGGCCCAACGTCTTAAAAACCCATCCAGCGTACTGTATAATGTCCTTGAGCAACGCTTTATCATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATGGGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTACTTTCAAGCAATCAGGTGATTCATTGACAGGTGGCGAAACTAATAAAACGGACAAACAGTTTAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAATTCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGATGGTACCTCTGACACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTACATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTTATACAACTGCGAAAAGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGAGCATTTGGTTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCATGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCAGGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGAGGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGATGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCTTAATCTCATTGGTGCTGATACTGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGACAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTATTATCAATAAATTTGGTATCACAACGCACAATTGAAGAGGTCATCATGCGAAGAGCAGAAAGAAAACTTAAGCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGAAAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGATACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTATGTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGAAAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGTTACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATCCTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGAAAGGCAAAGAATAGCACCTGAAGAAAAGTTCCTAAAACGTGAAGCTATTAAGAAAAAGGTGGAAGAAAAGAGATTAGCCAAATGGGAATCCTTGGGGTACCAGACATTAAAGATCAAAGATCCTGACATCTTACCGAACCAGAATATTCCAGACTCTGGATCCGTCCAACTTGTATATGGAGATTGCACTAATCCTTCAGTAGTTTGCCCTGCAAAGCCTGCCATCATATTCAGTTGTGTTGATAATTCAGGAACC TGGGGACATGGAGGAATGTT CGATGCTTTGG CCAATCTCTCAACATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCTTCACTTGATTCAGTTAGATGAAG CCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGTCGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTCCATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGCGAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATCAGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACATCTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAATGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTGTAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCTTGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGAACCGAAAACGAAAAA                           ]
[+] EMBL AU100698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AACCTTGGGNACATGGAGGAATGTTCCNATGCTTTGGCCCANTCTCTCAACATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCTTCACTTGATTCAGTTAGATGAAGCCCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGTCGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTCCATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGCGAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATCAGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACATCTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAATGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTGTAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCTTGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGAACCGAAAACGAAAAATGTTTGCCTGAACAAAAAAAAAAAAAA]




>consensus_6084#0
CATGGCGCCGCCACAAATGTATGAGCNCCGCCTCCTCGCCNCCGCCTCCCTCCTCCTCTC
CGCCGATGCGCAGGGCCAACCACCCCACGNCGCCGCCCAACTCGGAGTCGGAGTCACGGC
CGAGCTCAAGCCGCACCAGGTCGATGGCGTCGCGTGGCTCATCCGCCGCTACCAACTCGG
CGTCAACGTCCTGCTCGGTGACGAGGTCGGTCTCCATTTTCTTTTCCTTCCCCGCCGCGC
CGAGCTTCTTCAATACTCCATGTGCCTGCTCATGAATACGAGGAGGATCGACTCCGTCTT
GTTCTATGCTGTTTCAACTCANCTTATTTCATCAAACACTTTTCCGCAACACCATTTTTC
GTTACTGTTAATAATGTGTAATCAAGGTAATGTCATGTGAATGNTGTTTTTCTTATGTCG
GACGGACCATTGGCAGATGGGACTTGGCAAGACCCTCCAAGCAATCTCTTTGTTGAGCTA
CCTCAAGATCCACTCCATCTCACCTGGACCATTTTTGGTCTTATGTCCTCTAAGTGTCAC
CGATGGCTGGCTCTCGGAATTCAATAAATTTTGTCCTTCTTTGAGGGTTATCCAGTATGT
TGGTGATAAGTTGCACCGTCGTGATCTCCGGAGAATGATGTTTCAGGATGTCCAAAAATC
TTCATCGTCATCTCATTCCACTGAGTTACCGTTTGATGTCATGATGACAACCTATGACAT
AGCCTTAATGGACCAAGAATTTCTTTCACAAATTCCTTGGCACTATGTTGTCATTGATGA
GGCCCAACGTCTTAAAAACCCATCCAGCGTACTGTATAATGTCCTTGAGCAACGCTTTAT
CATGCCAAGACGTCTGCTACTAACGGGCACCCCTATCCAGAATAACCTTTCTGAACTATG
GGCATTGATGCACTTTTGCATGCCCTCGATTTTTGGTACCCTGGATCAATTTCTTTCTAC
TTTCAAGCAATCAGGTGATTCATTGACAGGTGGCGAAACTAATAAAACGGACAAACAGTT
TAAGATCCTTAAACATGTACTGAGAGCATTTATGCTGAGACGAACTAAAGCTTTACTAAT
TCAAAGCGGAATTTTGGCATTGCCTTCATTAACTGAGTTAACAGTGATGGTACCTCTGAC
ACCCTTACAGAAGAAACTATACTTGTCAGTATTGAGAAAAGAGCTGCAAACACTACTTAC
ATTTACTGGAGGATTGTCCCGCCACCAGTCTCTGCAAAACATCGTTATACAACTGCGAAA
AGCTTCTAGTCATCCATATCTATTCAGTGGCATTGAACCTGAGCCTTATGTGGAAGGGGA
GCATTTGGTTCAGGCTAGTGGAAAGCTTGTCATGCTAGATCTCATTCTTAAGAAGCTCCA
TGAAGTAGGCCATCGAGTTCTGCTATTTGCTCAGATGACTCAAACACTGGACATTCTTCA
GGACTTCTTAGAATTGCGTCAGTACACCTATGAACGTCTGGATGGTTCAGTGCGTGCTGA
GGAACGGTTTGCAGCAATAAAAAGTTTCAGCTCTCAACCTACCAAGGGTGTTGTCAGAGA
TGATAATCAGAGTGGAGCTTTTGTTTTCATGATATCAACTAGAGCAGGGGGTGTTGGCCT
TAATCTCATTGGTGCTGATACTGTTATTTTTTATGAGCAAGATTGGAATCCTCAAGCTGA
CAAACAGGCCTTGCAGCGTGCACACCGCATTGGACAGTTAAATAATGTATTATCAATAAA
TTTGGTATCACAACGCACAATTGAAGAGGTCATCATGCGAAGAGCAGAAAGAAAACTTAA
GCTTAGCCACAGCGTTATTGGAGAGGAGGATGCAACTTATGGGAAGGGGAAATATGTAGA
AAATGAAGCTAGCGACATGCGCTCGATTATATTTGGCTTACACCTATTTGATACTTCAGA
TACGACTGCAGAGACAATGAATGATGACACAGCTTCGGAGACTATCAAAGAAGAGACTAT
GTTGAAGCTGAAATCAATGTCTGAAAAAGTAGTGTTGATGCGTAGTCATGAACCTTCAGA
AAAGGATGAACGGGCATTCGAAATCAATCCAAATATGACAGACAACAGTGGGGCTGTTGT
TACGAGGGTATCTGATTCCGTTAATGTTGATCCGGATTTTAATGAAGCCGCATACTTATC
CTGGCTTGAGAAGTTTAAAGAGTCTTCGCATTCTAAGGAAAATACCAGAGCTGAACTAGA
AAGGCAAAGAATAGCACCTGAAGAAAAGTTCCTAAAACGTGAAGCTATTAAGAAAAAGGT
GGAAGAAAAGAGATTAGCCAAATGGGAATCCTTGGGGTACCAGACATTAAAGATCAAAGA
TCCTGACATCTTACCGAACCAGAATATTCCAGACTCTGGATCCGTCCAACTTGTATATGG
AGATTGCACTAATCCTTCAGTAGTTTGCCCTGCAAAGCCTGCCATCATATTCAGTTGTGT
TGATAATTCAGGAACCTGGGGACATGGAGGAATGTTCGATGCTTTGGCCAATCTCTCAAC
ATGCATTCCAGATGCTTATAATCGTGCTTCTGAATTTGATGATCTCCACCTGGCAGATCT
TCACTTGATTCAGTTAGATGAAGCCAAGTGCAACCGGAGTTTAGATGCTCCTCTCTGGGT
CGCGCTAGCTGTTGTGCAGTCTTATAATCCAAGGCGAAAGGTTCCACGAAGTGAAATTTC
CATACCTGATTTGGAGCTTTGTTTATCAAGAGTGGCCTTTTCAGCTGCTCAACATTCCGC
GAGCATCCACATGCCCCGAATCGGTCTCCAAGGTGGAGGTGGAGGTGGGTCCCAACGATC
AGAGTGGTACACCATAGAACGGCTGCTGAGGAAATACTCGTCTCTTCATGGCGTCGACAT
CTTTGTGTACTATTATAGGCGAGGGAACAAGCACTAGTTGGCAGCTTAAACAATAGAGAA
TGGCCATAGTACATAAGGAAGTGCCCCTCACCCTGTAGACTAGGAAATGCCTGCCATCTG
TAATATGAATGCAATGCATGTACTCTGAAAGGAGGAGGAGTAGTAGTAGGAGAAGTCTCT
TGTGTAATGTCTAATGCCTCGCGTCAGTTAGCTACGAAAAATGTTTGTCTGAACAAGTGA
ACCGAAAACGAAAAATGTTTGCCTGAACAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case