These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6085#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 608 fasta sequence [CGACGACGACGACGATGTCGACGACGGCGACGAACACCCCAAGCCCCTTCTTCTCCTCGGAGAGCCCGGTGGTCAAGAGCGAGCCCGTCTGCTCCGCCTCCGAGAGCTCTTCCTCGGCCGACGGCGACGTGTCATCGACGGGCTCCTCCGACGTCGTCCCGGAGATGCAGCTGCTCGACTTCTCGGAGGCGCCATGGGACGAGTCCGAGAGCTTCCTGCTGCACAAGTACCCGTCGCTGGAGATCGACTGGGACGCGATCCTTTCCTGATGCAGTGGCTGAATCTTCTTCCTCTCCCTGTT-CTTGATCCAGCTCTTGGTGTCCTGAACATTTTCACAACTCAGAGAGTGATGCTCTCCTTGATTAGCTACATGTTAATCTAGGTTTTGGGTTTGATCATGCCATCGATTCTGTAGCATCAACCCCTGGTCTGCTTGGTTTTTTCAATGGCATTGCCAGGAAGGAGGTCTCAGTGCTTTGGTTTCTGCGAGTTGTGCAACCCTGCATGCAAACTCTTCATTGTATATACCAAATATTTGAACTCTACATTGTAGTAGTTCATATATCCAATAAAGAACCATTTTAGCACATTCAAAAAA--AAAAAAAAAA] [+] EMBL CF303709 [CGACGACGACGACGATGTCGACGACGGCGACGAACACCCCAAGCCCCTTCTTCTCCTCGGAGAGCCCGGTGGTCAAGAGCGAGCCCGTCTGCTCCGCCTCCGAGAGCTCTTCCTCGGCCGACGGCGACGTGTCATCGACGGGCTCCTCCGACGTCGTCCCGGAGATGCAGCTGCTCGACTTCTCGGAGGCGCCATGGGACGAGTCCGAGAGCTTCCTGCTGCACAAGTACCCGTCGCTGGAGATCGACTGGGACGCGATCCTTTCCTGATGCAGTGGCTGAATCTTCTTCCTCTCCCTGTT CTTGATCCAGCTCTTGGTGTCCTGAACATTTTCACAACTCAGAGAGTGATGCTCTCCTTGATTAGCTACATGTTAATCTAGGTTTTGGGTTTGATCATGCCATCGATTCTGTAGCATCAACCCCTGGTCTGCTTGGTTTTTTCAATGGCATTGCCAGGAAGGAGGTCTCAGTGCTTTGGTTTCTGCGAGTTGTGCAACCCTGCATGCAAACTCTTCATTGTATATACCAAATATTTGAACTCTACATTGTAG ] [+] EMBL CF303524 [ CAAGAGCGAGCCCGTCTGCTCCGCCTCCGAGAGCTCTTCCTCGGCCGACGGCGACGTGTCATCGACGGGCTCCTCCGACGTCGTCCCGGAGATGCAGCTGCTCGACTTCTCGGAGGCGCCATGGGACGAGTCCGAGAGCTTCCTGCTGCACAAGTACCCGTCGCTGGAGATCGACTGGGACGCGATCCTTTCCTGATGCAGTGGCTGAATCTTCTTCCTCTCCCTGTT CTTGATCCAGCTCTTGGTGTCCTGAACATTTTCACAACTCAGAGAGTGATGCTCTCCTTGATTAGCTACATGTTAATCTAGGTTTTGGGTTTGATCATGCCATCGATTCTGTAGCATCAACCCCTGGTCTGCTTGGTTTTTTCAATGGCATTGCCAGGAAGGAGGTCTCAGTGCTTTGGTTTCTGCGAGTTGTGCAACCCTGCATGCAAACTCTTCATTGTATATACCAAATATTTGAACTCTACATTGTAGTAGTTCATATATCCAATAAAGAACCATTTTAGCACATTCAAAAAA AAAAAAAAAA] [+] EMBL AU183880 [ ATCCTTTCCTGATGCAGTGGCTGAATCTTCTTCCTCTCCCTGTTCCNNTATCCAGCTCTTGGTGTCCTGAACATTTTCACAACTCAGAGAGTGATGCTCTCCTTGATTAGCTACATGTTAATCTAGGTTTTGGGTTTGATCATGCCATCGATTCTGTAGCATCAACCCCTGGTCTGCTTGGTTTTTTCAATGGCATTGCCAGGAAGGAGGTCTCAGTGCTTTGGTTTCTGCGAGTTGTGCAACCCTGCATGCAAACTCTTCATTGTATATACCAAATATTTGAACTCTACATTGTAGTAGTTCATATATCCAATAAAGAACCATTTTAGCAAA AAAAAAGCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||