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Oryza sativa
cluster # 6096 cluster # 6096       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6096#0 length = 1924 sequences # 3  

consensusID : consensus_6096#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1924
fasta sequence
                              [TGGTTGTTTCTACCTTTGCTCTGATCGATCTATGTCTGCTTCCTGGACTTTTCAGTCTGGTAAATTTTTTCCATCAGTCAGAAATTATCTGGCTACAACCTGCTGCTTCTTGATGCTCAACTACCAGAGAATTAACATCACTATCTCAGATGGTCTAGCCCGTCAGAGTTGAAGTACAGTCTGGATCAAAATTTTCCTGAAATCCAGACAGTAAGTTCATGGACAGGGCGGACACATCGGGTTTTGTCAGTGGTGGACTCATCGGTACTTCGCTGCTGCTGATTTTCTTCCACTTCGTCTACTCTCCAGTGCACATATAGAACAAGATCAAGAAGCACCTGATCTATCTTTGTCTCGTTGTTTCTTCCACCTTCTGTACATTGCAGGATTACTTAGCCTAGATGAATAACGGTTTTCCGGAAATCATTCGCCGCGGAAACCCGCATCTGATGGATAATTCCGCAGTTGTGATAATGGGACACTCTGTGGCAAGCTACACCATGGACAGCCATGGACGGAGCTCTTCTTGCCTAGACCACCTGGGTTCATCAATGGAGAACAGTAGTATCCATGGCAAGAGAGGTAACAACCGGAGGTCGGGTCATGGTGTGTCTGCGCAAGATGACGGCTGCGGGTTGGTTCTTGGATTGGGTCCATCGCCGGAGATGGGCTCCTCCGCGGCGCGCAGGTCGAAAGCGCCGGCGCCGGCGACATTGTTCAGCCAGAGGAGCTTCTCCTTCACTGAGCCAGGGGTGCTCAGCCTTGGGCTTCATCGGGGAGATCATGGTGGCGCGACGATTCAGCATCTGGAAGAAGCGCCTGC-TGGGAACATCATCTCCTTCGCCGCCGCCGTCGATGAGGGCTCGACGTCGGCGAGGAGGAGCTCCGGTGGGTACATGCCGTCGCTGCTCTTCGCGCCTCGGCCCAACGCGTCGGCTCCTGAAGAGGCTCGTCATGATGTCGTGGCGGATCACACGGACAACACCGTGAGTGGTGGTGGCGCGCGCCATGGCCATGCGCGGCGTCGCGTCGTTCGTCAGCTCAGCCCTGAGCCTGAGCCTGAGCCTTCGGCGACCATGACGGAGACCTCGTTCGGTGTGAGCTCCGACGTGGTCACGACGGTGACCAATCCTGTGACGACGCAGCCGGCGGCGGCGGCGGCGCAGTCGCAACGCCGGCATCCGAAGAAGTGCAGGTTCAAGGGGTGCTCCAAAGGAGCGCGAGGCGCGTCGGGGCTGTGCATCGCCCATGGCGGCGGGCAGAGGTGCCAGAAGCCCGGGTGCCACAAGGGCGCCGAGAGCCGCACGGCCTACTGCAAGGCGCATGGCGGTGGCCGCCGGTGCATGCAGCTCGGCTGCACCAAGAGCGCCGAGGGGAAGACGGATCACTGCATCGCCCACGGCGGCGGCCGCCGGTGCGGGCACCAGGGCTGCCCGAAGGCCGCGCGGGGGAAGTCCGGGCGGTGCATCAAGCATGGCGGAGGGAAGAGGTGTTCGGTCGAGGGCTGCATCCGGAGCGCGGAGGGGAGGGTCGGGCTCTGCATCTCCCACGGCGGCGGGCGGCGGTGCCAGTACCCGGACTGCCGAAAGGGCGCGCAGGGGAGCACGCTGTACTGCAAGGCGCACGGCGGCGGCAAGCGGTGCGTGTTCGACGGGTGCCTCAAGGGCGCGGAGGGGAGCACGCCGCTGTGCAAGGCGCACGGCGGCGGGAAGCGGTGCATGTTCGAGGGCGGCGGGCTCTGCCCCAAGAGCGTCCACGGCGGCACCAGCTTCTGCGTGGCGCACGGCGGCGGGAAGCGGTGCACGGTGCCCGGGTGCGGCAAGAGCGCCCGCGGCCGCACGGACTGCTGCGTCAAGCACGGCGGCGGCAAGCGGTGCAGGGTCGACGGCTGCGCCAAGAGCGCGCAGGGGAGCACGGAGTTCTG]

[+] EMBL AK105763             [TGGTTGTTTCTACCTTTGCTCTGATCGATCTATGTCTGCTTCCTGGACTTTTCAGTCTGGTAAATTTTTTCCATCAGTCAGAAATTATCTGGCTACAACCTGCTGCTTCTTGATGCTCAACTACCAGAGAATTAACATCACTATCTCAGATGGTCTAGCCCGTCAGAGTTGAAGTACAGTCTGGATCAAAATTTTCCTGAAATCCAGACAGTAAGTTCATGGACAGGGCGGACACATCGGGTTTTGTCAGTGGTGGACTCATCGGTACTTCGCTGCTGCTGATTTTCTTCCACTTCGTCTACTCTCCAGTGCACATATAGAACAAGATCAAGAAGCACCTGATCTATCTTTGTCTCGTTGTTTCTTCCACCTTCTGTACATTGCAGGATTACTTAGCCTAGATGAATAACGGTTTTCCGGAAATCATTCGCCGCGGAAACCCGCATCTGATGGATAATTCCGCAGTTGTGATAATGGGACACTCTGTGGCAAGCTACACCATGGACAGCCATGGACGGAGCTCTTCTTGCCTAGACCACCTGGGTTCATCAATGGAGAACAGTAGTATCCATGGCAAGAGAGGTAACAACCGGAGGTCGGGTCATGGTGTGTCTGCGCAAGATGACGGCTGCGGGTTGGTTCTTGGATTGGGTCCATCGCCGGAGATGGGCTCCTCCGCGGCGCGCAGGTCGAAAGCGCCGGCGCCGGCGACATTGTTCAGCCAGAGGAGCTTCTCCTTCACTGAGCCAGGGGTGCTCAGCCTTGGGCTTCATCGGGGAGATCATGGTGGCGCGACGATTCAGCATCTGGAAGAAGCGCCTGC TGGGAACATCATCTCCTTCGCCGCCGCCGTCGATGAGGGCTCGACGTCGGCGAGGAGGAGCTCCGGTGGGTACATGCCGTCGCTGCTCTTCGCGCCTCGGCCCAACGCGTCGGCTCCTGAAGAGGCTCGTCATGATGTCGTGGCGGATCACACGGACAACACCGTGAGTGGTGGTGGCGCGCGCCATGGCCATGCGCGGCGTCGCGTCGTTCGTCAGCTCAGCCCTGAGCCTGAGCCTGAGCCTTCGGCGACCATGACGGAGACCTCGTTCGGTGTGAGCTCCGACGTGGTCACGACGGTGACCAATCCTGTGACGACGCAGCCGGCGGCGGCGGCGGCGCAGTCGCAACGCCGGCATCCGAAGAAGTGCAGGTTCAAGGGGTGCTCCAAAGGAGCGCGAGGCGCGTCGGGGCTGTGCATCGCCCATGGCGGCGGGCAGAGGTGCCAGAAGCCCGGGTGCCACAAGGGCGCCGAGAGCCGCACGGCCTACTGCAAGGCGCATGGCGGTGGCCGCCGGTGCATGCAGCTCGGCTGCACCAAGAGCGCCGAGGGGAAGACGGATCACTGCATCGCCCACGGCGGCGGCCGCCGGTGCGGGCACCAGGGCTGCCCGAAGGCCGCGCGGGGGAAGTCCGGGCGGTGCATCAAGCATGGCGGAGGGAAGAGGTGTTCGGTCGAGGGCTGCATCCGGAGCGCGGAGGGGAGGGTCGGGCTCTGCATCTCCCACGGCGGCGGGCGGCGGTGCCAGTACCCGGACTGCCGAAAGGGCGCGCAGGGGAGCACGCTGTACTGCAAGGCGCACGGCGGCGGCAAGCGGTGCGTGTTCGACGGGTGCCTCAAGGGCGCGGAGGGGAGCACGCCGCTGTGCAAGGCGCACGGCGGCGGGAAGCGGTGCATGTTCGAGGGCGGCGGGCTCTGCCCCAAGAGCGTCCACGGCGGCACCAGCTTCTGCGTGGCGCACGGCGGCGGGAAGCGGTGCACGGTGCCCGGGTGCGGCAAGAGCGCCCGCGGCCGCACGGACTGCTGCGTCAAGCACGGCGGCGGCAAGCGGTGCAGGGTCGACGGCTGCGCCAAGAGCGCGCAGGGGAGCACGGAGTTCTG]
[+] EMBL AU094226             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGTGGCGCGACGATTCAGCATCTGNAAGAAGCGCCTGCTTGGGAACATCATCTCCTTCGCCGCCGCCGTCGATGAGGGCTCGACGTCGGCGAGGAGGAGCTCCGGTGGGTACATGCCGTCGCTGCTCTTCGCGCCTCGGCCCAACGCGTCGGCTCCTGAAGAGGCTCGTCATGATGTCGTGGCGGATCACACGGACAACACCGTGAGTGGTGGTGGCGCGCGCCATGGCCATGCGCGGCGTCGCGTCGTTCGTCAGCTCAGCCCTGAGCCTGAGCCTGAGCCTTCGGCGACCATGACGGAGACCTCGTTCGGTGTGAGCTCCGACGTGGTCACGACGGTGACCAATCCTGTGACGACGCAGCCGGCGGCGGCGGCGGCGCAGTCGCAACGCCGGCATCCGAAGAAGTGCAGGTTCAAGGGGTGCTCCAAAGGAGCGCGAGGCGCGTCGGGGCTGTGCATCGCCCATGGCGGCGGGCAGAGGTGCCAGAAGCCCGGGTGCCACAAGGGCGCCGAGAGCCGCACGGCCTACTGCAAGGCGCATGGCGGTGGCCGCCGGTGCATGCAGCTCGGCTGCACCAAGAGCGCCGAGGGGAAGACGGATCACTGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C73299               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGTGGCGCGACGATTCAGCATCTGGAAGAAGCGCCTGC TGGGAACATCATCTCCTTCGCNGCCGCCGTCNATGAGGGCTCGACGTCGGCNAGGAGGAGCTCCGGTGGGTACATGCCGTCNCTGCTCTTCGCGCCTCGGCCCAACGCGTCGGCTCCTAAAGAGGCTCGTAATGATGTCGTGGCGGATCACACGGACAACACCGTGAGTGGTGGTGGCGCGCGCNATGGCCATGCGCGGCGTCGCGTCGTTCGTAAGCTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_6096#0 TGGTTGTTTCTACCTTTGCTCTGATCGATCTATGTCTGCTTCCTGGACTTTTCAGTCTGG TAAATTTTTTCCATCAGTCAGAAATTATCTGGCTACAACCTGCTGCTTCTTGATGCTCAA CTACCAGAGAATTAACATCACTATCTCAGATGGTCTAGCCCGTCAGAGTTGAAGTACAGT CTGGATCAAAATTTTCCTGAAATCCAGACAGTAAGTTCATGGACAGGGCGGACACATCGG GTTTTGTCAGTGGTGGACTCATCGGTACTTCGCTGCTGCTGATTTTCTTCCACTTCGTCT ACTCTCCAGTGCACATATAGAACAAGATCAAGAAGCACCTGATCTATCTTTGTCTCGTTG TTTCTTCCACCTTCTGTACATTGCAGGATTACTTAGCCTAGATGAATAACGGTTTTCCGG AAATCATTCGCCGCGGAAACCCGCATCTGATGGATAATTCCGCAGTTGTGATAATGGGAC ACTCTGTGGCAAGCTACACCATGGACAGCCATGGACGGAGCTCTTCTTGCCTAGACCACC TGGGTTCATCAATGGAGAACAGTAGTATCCATGGCAAGAGAGGTAACAACCGGAGGTCGG GTCATGGTGTGTCTGCGCAAGATGACGGCTGCGGGTTGGTTCTTGGATTGGGTCCATCGC CGGAGATGGGCTCCTCCGCGGCGCGCAGGTCGAAAGCGCCGGCGCCGGCGACATTGTTCA GCCAGAGGAGCTTCTCCTTCACTGAGCCAGGGGTGCTCAGCCTTGGGCTTCATCGGGGAG ATCATGGTGGCGCGACGATTCAGCATCTGGAAGAAGCGCCTGCTGGGAACATCATCTCCT TCGCCGCCGCCGTCGATGAGGGCTCGACGTCGGCGAGGAGGAGCTCCGGTGGGTACATGC CGTCGCTGCTCTTCGCGCCTCGGCCCAACGCGTCGGCTCCTGAAGAGGCTCGTCATGATG TCGTGGCGGATCACACGGACAACACCGTGAGTGGTGGTGGCGCGCGCCATGGCCATGCGC GGCGTCGCGTCGTTCGTCAGCTCAGCCCTGAGCCTGAGCCTGAGCCTTCGGCGACCATGA CGGAGACCTCGTTCGGTGTGAGCTCCGACGTGGTCACGACGGTGACCAATCCTGTGACGA CGCAGCCGGCGGCGGCGGCGGCGCAGTCGCAACGCCGGCATCCGAAGAAGTGCAGGTTCA AGGGGTGCTCCAAAGGAGCGCGAGGCGCGTCGGGGCTGTGCATCGCCCATGGCGGCGGGC AGAGGTGCCAGAAGCCCGGGTGCCACAAGGGCGCCGAGAGCCGCACGGCCTACTGCAAGG CGCATGGCGGTGGCCGCCGGTGCATGCAGCTCGGCTGCACCAAGAGCGCCGAGGGGAAGA CGGATCACTGCATCGCCCACGGCGGCGGCCGCCGGTGCGGGCACCAGGGCTGCCCGAAGG CCGCGCGGGGGAAGTCCGGGCGGTGCATCAAGCATGGCGGAGGGAAGAGGTGTTCGGTCG AGGGCTGCATCCGGAGCGCGGAGGGGAGGGTCGGGCTCTGCATCTCCCACGGCGGCGGGC GGCGGTGCCAGTACCCGGACTGCCGAAAGGGCGCGCAGGGGAGCACGCTGTACTGCAAGG CGCACGGCGGCGGCAAGCGGTGCGTGTTCGACGGGTGCCTCAAGGGCGCGGAGGGGAGCA CGCCGCTGTGCAAGGCGCACGGCGGCGGGAAGCGGTGCATGTTCGAGGGCGGCGGGCTCT GCCCCAAGAGCGTCCACGGCGGCACCAGCTTCTGCGTGGCGCACGGCGGCGGGAAGCGGT GCACGGTGCCCGGGTGCGGCAAGAGCGCCCGCGGCCGCACGGACTGCTGCGTCAAGCACG GCGGCGGCAAGCGGTGCAGGGTCGACGGCTGCGCCAAGAGCGCGCAGGGGAGCACGGAGT TCTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)