cluster # 6097

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Oryza sativa
cluster # 6097 cluster # 6097 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6097#0 length = 875 sequences # 3

consensusID : consensus_6097#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 875
fasta sequence

                              [ACGTACTAATTTAATATAAGTATAGAGCTTCATCATTTGACAAACAACAATGGCTAGGTTCGCGGGATCCCTTCAGCTGTACTGCCTCTCCGTCCTGCTCGTGATCCTCACCCAGCTTGGAGGAGGCTCTGCCATGGGGCTCCCCCGGCCGCCACCCAACGTGAACTTCACCATCGGCGTCGAGGGCGCTGTCTGGTGCAAGACCTGCCGCTACGCCGGCTACGTCAAGTCCAAGGACGCCTCGCCCCTCCCAAATGCGGCGGCGCTGCTGCGGTGCAGGTGGGGGAAGTGGGCGCTGTCGGTGTGGGGCGCGA-CGGACGCGCGCGGCTACTTCCTGATCCAGACGGGGACGCAGGTGGCGGCGTTCACGAGCAAGGACTG-CAGGGTGTACGTGCCGCGGTCGCCGTCGCGTGCGGCGTGCGGCGTGGCGCTCCAGCCTGGGCGGAAGACGGGTTCGCCGCTCAAGTTCCGCAGGTTCGTGGCGCTCCCCGACGGGCTGCAAGGGCGCTACTCCGCCGGCAACTTCGTCTTCGGCCCGCGAGACCCCAAGAAATGCTGACTTTCTGATTAGCGGTAACGTGTTTGGGACTTTGGGGCTGGGGGTGGTGTGGCTGTGCACTTCGAATTCTACAACTTGGTCACAGTTTGTGTGTGGCGTGTGCCCGGTGGATCGACGTGGACGTGCATTTCCGCATCCAGCAAATAATGATGATAAAAAAGTGTTGGACGTAGCCCCAGACCTAGTGTGTTGTGTTTAGTTCCTTTCAAAC-TTCCAAAATTTCATCGTAAAAAATGTTTCAATATATGCAGGGAACATTAAATGTGTACGAAAATAACCAATGTGGTTCTTAAAAAGAAATAAGGGAAACGATCAA]

[+] EMBL AK108128             [ACGTACTAATTTAATATAAGTATAGAGCTTCATCATTTGACAAACAACAATGGCTAGGTTCGCGGGATCCCTTCAGCTGTACTGCCTCTCCGTCCTGCTCGTGATCCTCACCCAGCTTGGAGGAGGCTCTGCCATGGGGCTCCCCCGGCCGCCACCCAACGTGAACTTCACCATCGGCGTCGAGGGCGCTGTCTGGTGCAAGACCTGCCGCTACGCCGGCTACGTCAAGTCCAAGGACGCCTCGCCCCTCCCAAATGCGGCGGCGCTGCTGCGGTGCAGGTGGGGGAAGTGGGCGCTGTCGGTGTGGGGCGCGA CGGACGCGCGCGGCTACTTCCTGATCCAGACGGGGACGCAGGTGGCGGCGTTCACGAGCAAGGACTG CAGGGTGTACGTGCCGCGGTCGCCGTCGCGTGCGGCGTGCGGCGTGGCGCTCCAGCCTGGGCGGAAGACGGGTTCGCCGCTCAAGTTCCGCAGGTTCGTGGCGCTCCCCGACGGGCTGCAAGGGCGCTACTCCGCCGGCAACTTCGTCTTCGGCCCGCGAGACCCCAAGAAATGCTGACTTTCTGATTAGCGGTAACGTGTTTGGGACTTTGGGGCTGGGGGTGGTGTGGCTGTGCACTTCGAATTCTACAACTTGGTCACAGTTTGTGTGTGGCGTGTGCCCGGTGGATCGACGTGGACGTGCATTTCCGCATCCAGCAAATAATGATGATAAAAAAGTGTTGGACGTAGCCCCAGACCTAGTGTGTTGTGTTTAGTTCCTTTCAAACTTTCAAAAATTTCATCGTATCAAATGTTTCAATATATGCAGGGAACATTAAATGTGTACGAAAATAACCAATGTGGTTCTTAAAAAGAAATAAGGGAAACGATCAA]
[+] EMBL BI804127             [                                                                                                                                                                                                                                                           ccAATGC GC GCGCTGCT C GT CA GCGGGGGAAGTGGGCACTGTC GTGTGGGGCGCGA CGGACGCGCGCGGCTACTTCCTGATCCAGAC GGGACGCAGGTGGCGGCGTTCACGAGCAAGGACTG CAGGGTGTACGTGCCGCGGTCGCCGTCGCGTGCGGCGTGCGGCGTGGCGCTCCAGCCTGGGCGGAAGACGGGTTCGCCGCTCAAGTTCCGCAGGTTCGTGGCGCTCCCCGACGGGCTGCAAGGGCGCTACTCCGCCGGCAACTTCGTCTTCGGCCCGCGAGACCCCAAGAAATGCTGACTTTCTGATTAGCGGTAACGTGTTTGGGACTTTGGGGCTGGGGGTGGTGTGGCTGTGCACTTCGAATTCTACAACTTGGTCACAGTTTGTGTGTGGCGTGTGCCCGGTGGATCGACGTGGACGTGCATTTCCGCATCCAGCAAATAATGATGATAAAAAAGTGTTGGACGTAGCCCCAGACCTAGTGTGTTGTGTTTAGTTCCTTTCAAAC TTCCAAAATTTCATCGTAAAAA                                                                                   ]
[+] EMBL BI799979             [                                                                                                                                                                                                                                                                                                                TGGGGCGCGACCGGACGCGCGCGGCTACTTCCTGATCCAGACGGGGACCCA GTGCCGGCGTTCACGAGCAAGGACTGCCAGGGTGTACGTGCCGCGGTCGCCGTCGCGTGCGGCGTGCGGCGTGGCGCTCCAGCCTGGGCGGAAGACGGGTTC CCGCTCAAGTTCCGCAGGTTCGTGGCGCTCCCCGACGGGGTGCAAGGGCGCTACTCCGCCGGCAACTTCGTCTTCGGCCCGCGAGACCCCAAGAAATGCTGACTTTCTGATTAGCGGTAACGTGTTTGGGACTTTGGGGCTGGGGGTGGTGT GCTGTGCACTTCGAATTCTACAACTTGGTCACAGTTTGTGTGTGGCGTGTGCCCGGTGGATCGACGTGGACGTGCATTTCCGCATCCA CAAATAATGATGATAAAAAAGT TT GACGTA CCCCAGACCTA   TTTTTTTTTTAATTCCTTTCAAAC TTCCAAAATTTCATCGTAAAAA                                                                                   ]




>consensus_6097#0
ACGTACTAATTTAATATAAGTATAGAGCTTCATCATTTGACAAACAACAATGGCTAGGTT
CGCGGGATCCCTTCAGCTGTACTGCCTCTCCGTCCTGCTCGTGATCCTCACCCAGCTTGG
AGGAGGCTCTGCCATGGGGCTCCCCCGGCCGCCACCCAACGTGAACTTCACCATCGGCGT
CGAGGGCGCTGTCTGGTGCAAGACCTGCCGCTACGCCGGCTACGTCAAGTCCAAGGACGC
CTCGCCCCTCCCAAATGCGGCGGCGCTGCTGCGGTGCAGGTGGGGGAAGTGGGCGCTGTC
GGTGTGGGGCGCGACGGACGCGCGCGGCTACTTCCTGATCCAGACGGGGACGCAGGTGGC
GGCGTTCACGAGCAAGGACTGCAGGGTGTACGTGCCGCGGTCGCCGTCGCGTGCGGCGTG
CGGCGTGGCGCTCCAGCCTGGGCGGAAGACGGGTTCGCCGCTCAAGTTCCGCAGGTTCGT
GGCGCTCCCCGACGGGCTGCAAGGGCGCTACTCCGCCGGCAACTTCGTCTTCGGCCCGCG
AGACCCCAAGAAATGCTGACTTTCTGATTAGCGGTAACGTGTTTGGGACTTTGGGGCTGG
GGGTGGTGTGGCTGTGCACTTCGAATTCTACAACTTGGTCACAGTTTGTGTGTGGCGTGT
GCCCGGTGGATCGACGTGGACGTGCATTTCCGCATCCAGCAAATAATGATGATAAAAAAG
TGTTGGACGTAGCCCCAGACCTAGTGTGTTGTGTTTAGTTCCTTTCAAACTTCCAAAATT
TCATCGTAAAAAATGTTTCAATATATGCAGGGAACATTAAATGTGTACGAAAATAACCAA
TGTGGTTCTTAAAAAGAAATAAGGGAAACGATCAA

clustalw multiple alignements is not computed in this case