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Oryza sativa
cluster # 6103 cluster # 6103       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6103#0 length = 1357 sequences # 4  
consensusID : consensus_6103#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1357
fasta sequence 
                              [CAAAGAGAGAGAAAGCGCTAAACCCAAACCGGTCTCGACCTCGTCGGCGCCGCCGCGGCGAGGCGTCACGTCAGGGACCAGGAGATGGCGGGGAGCAGGGCGGCGGGGCGGGGAGGGAGGCCGCTGCTGGGGGGAGGGGGCGGGAAACGCGGCGGCGGCGGCGGCGGCGGTGGTGGTGGAGGGGGGAAGTCGTCGTCGTACACGACGACGGTGATCCTGGCGGCGCTGCTGCTGGCGTCGGTGGCGCTGCTCCTCCTCGTGGCGCTCGGCGCGCTCTCGCTGCCCTCGGGCGGCGGCGTCGGCGTCGGCCACGCCGGCATCGGCCTCCCCCGCCCGCGCCCGCGCTTCCGCAGATCCGCCGCGTTCGAGTCGGGGCTGGAGATGCGCGGGGGCGAGAAGGGGGAGCCGTGGACGGAGGTGCTGTCGTGGGAGCCCCGGGCGTTCTTGTATCACAATTTCCTCTCGAAGGAAGAATGTGAGTATCTGATTTCATTGGCAAAGCCTCACATGAAGAAATCTACTGTTGTTGATGCATCAACTGGAGGGAGTAAAGATAGCAGGGTTCGAACGAGTTCAGGAATGTTCCTTGGAAGAGGGCAGGACAAAATTATCCGTACGATCGAGAAAAGGATATCAGACTACACCTTCATACCTGTAGAGAACGGAGAGGGTCTTCAAGTCCTCCACTATGAAGTTGGACAGAAGTATGAACCTCACTTCGATTACTTCCATGATGAATTCAACACCAAAAACGGGGGGCAGCGTATAGCAACTCTTCTTATGTATCTTTCTGATGTTGAAGAGGGTGGTGAGACTATTTTCCCCTCTTCTAAAGCTAACAGCAGCTCATCACCATTTTATAATGAGCTGTCTGAATGTGCTAAGAAGGGTTTGGCTGTCAAACCCAAGATGGGAGATGCTTTGCTTTTCTGGAGCATGAGGCCTGATGGGTCTTTGGATGCCACAAGCCTTCATGGTGGATGTCCAGTGATAAAAGGTAACAAATGGTCATCGACAAAGTGGATGCGTGTTCATGAGTACAAGATATAGACATCAGAAACTAGAGATTCAGAGGTTACTCACGAATTCAAATTTGTCGATGTTGTTGCTTAAAGAAAGAAAAGAAAAGCGGTCATTTTTGGCGCATGTTGAGGACTTCAATTTTTCCATAGAGAAGCATTACAATTTTTTTTAGCTGTAACCAACATGTTGTACACTAACTTCTTAGGCTTATGAACAATGATCATCGCTTTGCTTATGAACAATGATCGTTTCAAAGCGATGGATGTGTCGAATGTATAAATAATAATTGCCCTCCTAAAGTCGTAATGAAATTCATGATATAATGCCTGATGGA]

[+] EMBL AK120584             [CAAAGAGAGAGAAAGCGCTAAACCCAAACCGGTCTCGACCTCGTCGGCGCCGCCGCGGCGAGGCGTCACGTCAGGGACCAGGAGATGGCGGGGAGCAGGGCGGCGGGGCGGGGAGGGAGGCCGCTGCTGGGGGGAGGGGGCGGGAAACGCGGCGGCGGCGGCGGCGGCGGTGGTGGTGGAGGGGGGAAGTCGTCGTCGTACACGACGACGGTGATCCTGGCGGCGCTGCTGCTGGCGTCGGTGGCGCTGCTCCTCCTCGTGGCGCTCGGCGCGCTCTCGCTGCCCTCGGGCGGCGGCGTCGGCGTCGGCCACGCCGGCATCGGCCTCCCCCGCCCGCGCCCGCGCTTCCGCAGATCCGCCGCGTTCGAGTCGGGGCTGGAGATGCGCGGGGGCGAGAAGGGGGAGCCGTGGACGGAGGTGCTGTCGTGGGAGCCCCGGGCGTTCTTGTATCACAATTTCCTCTCGAAGGAAGAATGTGAGTATCTGATTTCATTGGCAAAGCCTCACATGAAGAAATCTACTGTTGTTGATGCATCAACTGGAGGGAGTAAAGATAGCAGGGTTCGAACGAGTTCAGGAATGTTCCTTGGAAGAGGGCAGGACAAAATTATCCGTACGATCGAGAAAAGGATATCAGACTACACCTTCATACCTGTAGAGAACGGAGAGGGTCTTCAAGTCCTCCACTATGAAGTTGGACAGAAGTATGAACCTCACTTCGATTACTTCCATGATGAATTCAACACCAAAAACGGGGGGCAGCGTATAGCAACTCTTCTTATGTATCTTTCTGATGTTGAAGAGGGTGGTGAGACTATTTTCCCCTCTTCTAAAGCTAACAGCAGCTCATCACCATTTTATAATGAGCTGTCTGAATGTGCTAAGAAGGGTTTGGCTGTCAAACCCAAGATGGGAGATGCTTTGCTTTTCTGGAGCATGAGGCCTGATGGGTCTTTGGATGCCACAAGCCTTCATGGTGGATGTCCAGTGATAAAAGGTAACAAATGGTCATCGACAAAGTGGATGCGTGTTCATGAGTACAAGATATAGACATCAGAAACTAGAGATTCAGAGGTTACTCACGAATTCAAATTTGTCGATGTTGTTGCTTAAAGAAAGAAAAGAAAAGCGGTCATTTTTGGCGCATGTTGAGGACTTCAATTTTTCCATAGAGAAGCATTACAATTTTTTTTAGCTGTAACCAACATGTTGTACACTAACTTCTTAGGCTTATGAACAATGATCATCGCTTTGCTTATGAACAATGATCGTTTCAAAGCGATGGATGTGTCGAATGTATAAATAATAATTGCCCTCCTAAAGTCGTAATGAAATTCATGATATAATGCCTGAT   ]
[+] EMBL CF196402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTTCAAGTCCTCCACTATGAAGTTGGACAGAAGTATGAACCTCACTTCGATTACTTCCATGATGAATTCAACACCAAAAACGGGGGGCAGCGTATAGCAACTCTTCTTATGTATCTTTCTGATGTTGAAGAGGGTGGTGAGACTATTTTCCCCTCTTCTAAAGCTAACAGCAGCTCATCACCATTTTATAATGAGCTGTCTGAATGTGCTAAGAAGGGTTTGGCTGTCAAACCCAAGATGGGAGATGCTTTGCTTTTCTGGAGCATGAGGCCTGATGGGTCTTTGGATGCCACAAGCCTTCATGGTGGATGTCCAGTGATANANNNNNACAAATGGTCATCGACnnag                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BI305673             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGTTGTTGCTTAAAGAAAGAAAAGAAAAGCGGTCATTTTTGGCGCATGTTGAGGACTTCAATTTTTCCATAGAGAAGCATTACAATTTTTTTTAGCTGTAACCAACATGTTGTACACTAACTTCTTAGGCTTATGAACAATGATCATCGCTTTGCTTATGAACAATGATCGTTTCAAAGCGATGGATGTGTCGAATGTATAAATAATAATTGCCCTCCTAAAGTCGTAATGAAATTCATGATATAATGCCTGATGGA]
[-] EMBL BI306020             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGTTGTTGCTTAAAGAAAGAAAAGAAAAGCGGTCATTTTTGGCGCATGTTGAGGACTTCAATTTTTCCATAGAGAAGCATTACAATTTTTTTTAGCTGTAACCAACATGTTGTACACTAACTTCTTAGGCTTATGAACAATGATCATCGCTTTGCTTATGAACAATGATCGTTTCAAAGCGATGGATGTGTCGAATGTATAAATAATAATTGCCCTCCTAAAGTCGTAATGAAATTCATGATATAATGCCTGATGGA]




>consensus_6103#0
CAAAGAGAGAGAAAGCGCTAAACCCAAACCGGTCTCGACCTCGTCGGCGCCGCCGCGGCG
AGGCGTCACGTCAGGGACCAGGAGATGGCGGGGAGCAGGGCGGCGGGGCGGGGAGGGAGG
CCGCTGCTGGGGGGAGGGGGCGGGAAACGCGGCGGCGGCGGCGGCGGCGGTGGTGGTGGA
GGGGGGAAGTCGTCGTCGTACACGACGACGGTGATCCTGGCGGCGCTGCTGCTGGCGTCG
GTGGCGCTGCTCCTCCTCGTGGCGCTCGGCGCGCTCTCGCTGCCCTCGGGCGGCGGCGTC
GGCGTCGGCCACGCCGGCATCGGCCTCCCCCGCCCGCGCCCGCGCTTCCGCAGATCCGCC
GCGTTCGAGTCGGGGCTGGAGATGCGCGGGGGCGAGAAGGGGGAGCCGTGGACGGAGGTG
CTGTCGTGGGAGCCCCGGGCGTTCTTGTATCACAATTTCCTCTCGAAGGAAGAATGTGAG
TATCTGATTTCATTGGCAAAGCCTCACATGAAGAAATCTACTGTTGTTGATGCATCAACT
GGAGGGAGTAAAGATAGCAGGGTTCGAACGAGTTCAGGAATGTTCCTTGGAAGAGGGCAG
GACAAAATTATCCGTACGATCGAGAAAAGGATATCAGACTACACCTTCATACCTGTAGAG
AACGGAGAGGGTCTTCAAGTCCTCCACTATGAAGTTGGACAGAAGTATGAACCTCACTTC
GATTACTTCCATGATGAATTCAACACCAAAAACGGGGGGCAGCGTATAGCAACTCTTCTT
ATGTATCTTTCTGATGTTGAAGAGGGTGGTGAGACTATTTTCCCCTCTTCTAAAGCTAAC
AGCAGCTCATCACCATTTTATAATGAGCTGTCTGAATGTGCTAAGAAGGGTTTGGCTGTC
AAACCCAAGATGGGAGATGCTTTGCTTTTCTGGAGCATGAGGCCTGATGGGTCTTTGGAT
GCCACAAGCCTTCATGGTGGATGTCCAGTGATAAAAGGTAACAAATGGTCATCGACAAAG
TGGATGCGTGTTCATGAGTACAAGATATAGACATCAGAAACTAGAGATTCAGAGGTTACT
CACGAATTCAAATTTGTCGATGTTGTTGCTTAAAGAAAGAAAAGAAAAGCGGTCATTTTT
GGCGCATGTTGAGGACTTCAATTTTTCCATAGAGAAGCATTACAATTTTTTTTAGCTGTA
ACCAACATGTTGTACACTAACTTCTTAGGCTTATGAACAATGATCATCGCTTTGCTTATG
AACAATGATCGTTTCAAAGCGATGGATGTGTCGAATGTATAAATAATAATTGCCCTCCTA
AAGTCGTAATGAAATTCATGATATAATGCCTGATGGA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)