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Oryza sativa
cluster # 6119 cluster # 6119       Sequences # 4       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6119#0 length = 2631 sequences # 2  
 consensus_6119#1 length = 568 sequences # 1  
consensus_6119#2 length = 277 sequences # 1  
consensusID : consensus_6119#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2631
fasta sequence 
                              [TAATCGATTAATTAATCAATTAATTTAATTACAGCATCTGCAACTTTCGCCTTCTTCCCGCAGCATCGAAGCGGAGGAGGGGAAAGGAAGGCGAGAGAGAGAGAGAGAGAGAGGAGAGGAGAGGAGCGCGTTGCGAAGGCTCTCGAATCGAGCGCGGCAATGCGAGAGAGCGGTTCTTGAGCCCCCGCGATTCGATTCTTCCGGTGCAAAGAATGTACAAGATGATGTATCCTAGCTGGAATGACATTTCAGTGTACATATCTGAGTATTGGTCTGTTATAATTGCTACAGTCATTTTTGCATCTGTTACTGGTGTGACAATTTATTATACTGTCAATCAATTGAACAAAAACATCAGCTTGAGTTTGATGAAAGCTATCAGAGCTAGGGCAAGGAAGTACAAGAAATTGAAAGATAAGGTCCCTGCCTCTTCCCACATTTGGAGAAAAGAACTTGGCTCTCGTAGTAAAGGTCTGAAATGCTGTGTATGCTTGAAGTCTGTTTCATCTCCGCAGTATATGGGGGGAGTTATCCATCAGTGTGATATTTGTGGTGCCACTGCACATCCTAGTTGCTCAGGAAATGCGCACAAAGATTGCAAATGTGTTTCTATGGTTGGTTTTGAACATGTCATTCATCAGTGGGCTGTACAGTGGATTGACACATCGGATCGCTCTGAGGAGGATTCTTTCTGCTGCTATTGTGATGAATCTTGCAATGGAGCTTTCCTCGCAGGTTCTCCAATTTGGTACTGTATGTGGTGCCAACGGCTAGTGCATGTTGATTGTCACAACAACCTATCTATAGAAACTGGTGATATCTGTGACTTGGGCCCCTTGAAGCGGCTAATATTGTCACCTCTTTGTGTTAAGGAGCTCCATTGGACAGGTGCAGCAGGACTTATCAGTTCTATAACACATGGGGCTAATGAATTGGCTTCCAATGTCCGAGAGAGGATCAGGAGTCGCGGTAAAAAGTACAGAAAGGGTACCATTTCTGTTGATTCAGATAGCTCTGGTACTATTGACCCGCCATCTGATATTGAAGGAGATTCACAAGAAACAAACAATGCAGCTAAAAGGAGAGAGGATCATGCCAATGGTGAACTTCCTGAAGTACATGAAAGCTCTGAATCAGAGAATGATAAACAGCTGTTGACAGAAAACAAAACTAGCATACCGAACGGCCAACATGAGGATTCACACGTACACAATAATCAGAAATATGAAATCGTGGATGTGCCTTCTGATTCTAGGCCATTGCTAGTGTTTATTAACAAGAGAAGTGGAGCACAGTGTGGTGATTCACTGAGACAACGTTTGCAGATCCTTCTTAATCCTATCCAGGTTTTTGAGCTGGGTAAACAGCAAGGACCAGAAGTTGGTTTGACTTTGTTTAGGAAGGTACCCCACTTCAGAGTTCTTGTTTGTGGTGGAGATGGCACCGTTGCTTGGGTCCTGGATGCCATTGAGAAACAGAAGTTTGAAGCTCCACCACCTGTGGCCATCCTTCCAGCTGGTACTGGTAATGATCTTGCCAGGGTTTTGTCTTGGGGTGGTGGTCTCGGAATTGTTGAGAAACAGGGAGGTCTGTTCTCTGTTTTAAAAGATGTCGAGCATGCAGCAGTTACTGTTCTTGATAGATGGAAGATCACAATAAAAGACAACCAAGGGAAGCTTATGTCACAACCAAAATATATGAACAACTACTTTGGGGTTGGCTGTGATGCAAAGGTTGCTTTAGATATCCACAATCTGAGGGAGGAAAACCCTGAACGTTTTTATAGTCAGTTTATGAACAAGGTGCTTTATGCAAAAGAGGGAGCAAAGAATATGATGGATAACACATTTGATTATTTTCCATGGGATGTCAAGCTTGAGATAGATGGATCCAAAATTAATATTCCTCAGAGCTACATGGGAGGAGTTGACCTGTGGAAGAACGAGGATGATGTTTCTGACAATTTCCACCCTCAGTCAATGCATGACAAGATGCTAGAAGTAGTTAGCTTCACTGGAATGCTGCATCTTGGAAGGCTGCAGGTAGGGCTTTCTCGCGCGCAGAGGTTAGCTCAAGGTCATCATATAAAGATCGAGATCAAAACTAAAATGCCCATTCAAGTCGATGGAGAGCCTTGGTCGCAGGATCCATGCACCATAGTAGTTTCACATCACTGCCAGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACCTATCGGCCATGCGGCCTCCATAATGGCCGACGTTCTGGAAAACGCCGAGAATAACGGCATCATCACAGCGTCGCAGAAGAGGACCCTCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGGCATACTTCCACGTTGATTGGAGGCTTCTTTCTGAGCCCCTGCCAAACTGGACATGATCATTTGTACATACAAGCATGATTGTTTTTCCCCACTTTGATTGTGCTTGTGTATAGTTTGTAAATTTTTTGTAGAGCTCGTGAGATGAGAGCATAGGTGCTTAGAGCACTACCTGGACATAACTGGAAAGCAGTGGCTTTAGAGCTGAGAAATGTGATACCCACTGCAACCCAG-TTG-CCTGGCATTCTGGCACGCTTGCTAAAGCAGTGATACCACTACACCAGTTTATTATTATTCCAGAT]

[+] EMBL AK100331             [TAATCGATTAATTAATCAATTAATTTAATTACAGCATCTGCAACTTTCGCCTTCTTCCCGCAGCATCGAAGCGGAGGAGGGGAAAGGAAGGCGAGAGAGAGAGAGAGAGAGAGGAGAGGAGAGGAGCGCGTTGCGAAGGCTCTCGAATCGAGCGCGGCAATGCGAGAGAGCGGTTCTTGAGCCCCCGCGATTCGATTCTTCCGGTGCAAAGAATGTACAAGATGATGTATCCTAGCTGGAATGACATTTCAGTGTACATATCTGAGTATTGGTCTGTTATAATTGCTACAGTCATTTTTGCATCTGTTACTGGTGTGACAATTTATTATACTGTCAATCAATTGAACAAAAACATCAGCTTGAGTTTGATGAAAGCTATCAGAGCTAGGGCAAGGAAGTACAAGAAATTGAAAGATAAGGTCCCTGCCTCTTCCCACATTTGGAGAAAAGAACTTGGCTCTCGTAGTAAAGGTCTGAAATGCTGTGTATGCTTGAAGTCTGTTTCATCTCCGCAGTATATGGGGGGAGTTATCCATCAGTGTGATATTTGTGGTGCCACTGCACATCCTAGTTGCTCAGGAAATGCGCACAAAGATTGCAAATGTGTTTCTATGGTTGGTTTTGAACATGTCATTCATCAGTGGGCTGTACAGTGGATTGACACATCGGATCGCTCTGAGGAGGATTCTTTCTGCTGCTATTGTGATGAATCTTGCAATGGAGCTTTCCTCGCAGGTTCTCCAATTTGGTACTGTATGTGGTGCCAACGGCTAGTGCATGTTGATTGTCACAACAACCTATCTATAGAAACTGGTGATATCTGTGACTTGGGCCCCTTGAAGCGGCTAATATTGTCACCTCTTTGTGTTAAGGAGCTCCATTGGACAGGTGCAGCAGGACTTATCAGTTCTATAACACATGGGGCTAATGAATTGGCTTCCAATGTCCGAGAGAGGATCAGGAGTCGCGGTAAAAAGTACAGAAAGGGTACCATTTCTGTTGATTCAGATAGCTCTGGTACTATTGACCCGCCATCTGATATTGAAGGAGATTCACAAGAAACAAACAATGCAGCTAAAAGGAGAGAGGATCATGCCAATGGTGAACTTCCTGAAGTACATGAAAGCTCTGAATCAGAGAATGATAAACAGCTGTTGACAGAAAACAAAACTAGCATACCGAACGGCCAACATGAGGATTCACACGTACACAATAATCAGAAATATGAAATCGTGGATGTGCCTTCTGATTCTAGGCCATTGCTAGTGTTTATTAACAAGAGAAGTGGAGCACAGTGTGGTGATTCACTGAGACAACGTTTGCAGATCCTTCTTAATCCTATCCAGGTTTTTGAGCTGGGTAAACAGCAAGGACCAGAAGTTGGTTTGACTTTGTTTAGGAAGGTACCCCACTTCAGAGTTCTTGTTTGTGGTGGAGATGGCACCGTTGCTTGGGTCCTGGATGCCATTGAGAAACAGAAGTTTGAAGCTCCACCACCTGTGGCCATCCTTCCAGCTGGTACTGGTAATGATCTTGCCAGGGTTTTGTCTTGGGGTGGTGGTCTCGGAATTGTTGAGAAACAGGGAGGTCTGTTCTCTGTTTTAAAAGATGTCGAGCATGCAGCAGTTACTGTTCTTGATAGATGGAAGATCACAATAAAAGACAACCAAGGGAAGCTTATGTCACAACCAAAATATATGAACAACTACTTTGGGGTTGGCTGTGATGCAAAGGTTGCTTTAGATATCCACAATCTGAGGGAGGAAAACCCTGAACGTTTTTATAGTCAGTTTATGAACAAGGTGCTTTATGCAAAAGAGGGAGCAAAGAATATGATGGATAACACATTTGATTATTTTCCATGGGATGTCAAGCTTGAGATAGATGGATCCAAAATTAATATTCCTCAGAGCTACATGGGAGGAGTTGACCTGTGGAAGAACGAGGATGATGTTTCTGACAATTTCCACCCTCAGTCAATGCATGACAAGATGCTAGAAGTAGTTAGCTTCACTGGAATGCTGCATCTTGGAAGGCTGCAGGTAGGGCTTTCTCGCGCGCAGAGGTTAGCTCAAGGTCATCATATAAAGATCGAGATCAAAACTAAAATGCCCATTCAAGTCGATGGAGAGCCTTGGTCGCAGGATCCATGCACCATAGTAGTTTCACATCACTGCCAGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACCTATCGGCCATGCGGCCTCCATAATGGCCGACGTTCTGGAAAACGCCGAGAATAACGGCATCATCACAGCGTCGCAGAAGAGGACCCTCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGGCATACTTCCACGTTGATTGGAGGCTTCTTTCTGAGCCCCTGCCAAACTGGACATGATCATTTGTACATACAAGCATGATTGTTTTTCCCCACTTTGATTGTGCTTGTGTATAGTTTGTAAATTTTTTGTAGAGCTCGTGAGATGAGAGCATAGGTGCTTAGAGCACTACCTGGACATAACTGGAAAGCAGTGGCTTTAGAGCTGAGAAATGTGATACCCACTGCAACCCAG TTG CCTGGCATTCTGGCACGCTTGCTAAAGCAGTGATACCACTACACCAGTTTATTATTATTCCAGAT]
[+] EMBL BE039588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCTTTCTCGCGCGCAGAGGTTAGCTCAAGGTCATCATATAAAGATCGAGATCAAAACTAAAATGCCCATTCAAGTCGATGGAGAGCCTTGGTCGCAGGATCCATGCACCATAGTAGTTTCACATCACTGCCAGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACCTATCGGCCATGCGGCCTCCATAATGGCCGACGTTCTGGAAAACGCCGAGAACAACGGCATCATCACAGCGTCGCAGAAGAGGACCCTCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGGCATACTTCCACGTTGATTGGAGGCTTCTTTCTGAGCCCCTGCCAAACTGGACATGATCATTTGTACATACAAGCATGATTGTTTTTCCCCACTTTGATTGTGCTTGTGTATAGTTTGTAAATTTTTTGTAGAGCTCGTGAGATGAGAACATAGGTGCTTAAAGCACTACCTGGACATAACTGGAAAGCAGTGGCTTTAGAGCTGAGAAATGTGATACCCACTGGAACCCAGTTTGCCCTGGCATTTTGGAACGC                                               ]




>consensus_6119#0
TAATCGATTAATTAATCAATTAATTTAATTACAGCATCTGCAACTTTCGCCTTCTTCCCG
CAGCATCGAAGCGGAGGAGGGGAAAGGAAGGCGAGAGAGAGAGAGAGAGAGAGGAGAGGA
GAGGAGCGCGTTGCGAAGGCTCTCGAATCGAGCGCGGCAATGCGAGAGAGCGGTTCTTGA
GCCCCCGCGATTCGATTCTTCCGGTGCAAAGAATGTACAAGATGATGTATCCTAGCTGGA
ATGACATTTCAGTGTACATATCTGAGTATTGGTCTGTTATAATTGCTACAGTCATTTTTG
CATCTGTTACTGGTGTGACAATTTATTATACTGTCAATCAATTGAACAAAAACATCAGCT
TGAGTTTGATGAAAGCTATCAGAGCTAGGGCAAGGAAGTACAAGAAATTGAAAGATAAGG
TCCCTGCCTCTTCCCACATTTGGAGAAAAGAACTTGGCTCTCGTAGTAAAGGTCTGAAAT
GCTGTGTATGCTTGAAGTCTGTTTCATCTCCGCAGTATATGGGGGGAGTTATCCATCAGT
GTGATATTTGTGGTGCCACTGCACATCCTAGTTGCTCAGGAAATGCGCACAAAGATTGCA
AATGTGTTTCTATGGTTGGTTTTGAACATGTCATTCATCAGTGGGCTGTACAGTGGATTG
ACACATCGGATCGCTCTGAGGAGGATTCTTTCTGCTGCTATTGTGATGAATCTTGCAATG
GAGCTTTCCTCGCAGGTTCTCCAATTTGGTACTGTATGTGGTGCCAACGGCTAGTGCATG
TTGATTGTCACAACAACCTATCTATAGAAACTGGTGATATCTGTGACTTGGGCCCCTTGA
AGCGGCTAATATTGTCACCTCTTTGTGTTAAGGAGCTCCATTGGACAGGTGCAGCAGGAC
TTATCAGTTCTATAACACATGGGGCTAATGAATTGGCTTCCAATGTCCGAGAGAGGATCA
GGAGTCGCGGTAAAAAGTACAGAAAGGGTACCATTTCTGTTGATTCAGATAGCTCTGGTA
CTATTGACCCGCCATCTGATATTGAAGGAGATTCACAAGAAACAAACAATGCAGCTAAAA
GGAGAGAGGATCATGCCAATGGTGAACTTCCTGAAGTACATGAAAGCTCTGAATCAGAGA
ATGATAAACAGCTGTTGACAGAAAACAAAACTAGCATACCGAACGGCCAACATGAGGATT
CACACGTACACAATAATCAGAAATATGAAATCGTGGATGTGCCTTCTGATTCTAGGCCAT
TGCTAGTGTTTATTAACAAGAGAAGTGGAGCACAGTGTGGTGATTCACTGAGACAACGTT
TGCAGATCCTTCTTAATCCTATCCAGGTTTTTGAGCTGGGTAAACAGCAAGGACCAGAAG
TTGGTTTGACTTTGTTTAGGAAGGTACCCCACTTCAGAGTTCTTGTTTGTGGTGGAGATG
GCACCGTTGCTTGGGTCCTGGATGCCATTGAGAAACAGAAGTTTGAAGCTCCACCACCTG
TGGCCATCCTTCCAGCTGGTACTGGTAATGATCTTGCCAGGGTTTTGTCTTGGGGTGGTG
GTCTCGGAATTGTTGAGAAACAGGGAGGTCTGTTCTCTGTTTTAAAAGATGTCGAGCATG
CAGCAGTTACTGTTCTTGATAGATGGAAGATCACAATAAAAGACAACCAAGGGAAGCTTA
TGTCACAACCAAAATATATGAACAACTACTTTGGGGTTGGCTGTGATGCAAAGGTTGCTT
TAGATATCCACAATCTGAGGGAGGAAAACCCTGAACGTTTTTATAGTCAGTTTATGAACA
AGGTGCTTTATGCAAAAGAGGGAGCAAAGAATATGATGGATAACACATTTGATTATTTTC
CATGGGATGTCAAGCTTGAGATAGATGGATCCAAAATTAATATTCCTCAGAGCTACATGG
GAGGAGTTGACCTGTGGAAGAACGAGGATGATGTTTCTGACAATTTCCACCCTCAGTCAA
TGCATGACAAGATGCTAGAAGTAGTTAGCTTCACTGGAATGCTGCATCTTGGAAGGCTGC
AGGTAGGGCTTTCTCGCGCGCAGAGGTTAGCTCAAGGTCATCATATAAAGATCGAGATCA
AAACTAAAATGCCCATTCAAGTCGATGGAGAGCCTTGGTCGCAGGATCCATGCACCATAG
TAGTTTCACATCACTGCCAGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACCTATCGGCC
ATGCGGCCTCCATAATGGCCGACGTTCTGGAAAACGCCGAGAATAACGGCATCATCACAG
CGTCGCAGAAGAGGACCCTCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGGCATACTTC
CACGTTGATTGGAGGCTTCTTTCTGAGCCCCTGCCAAACTGGACATGATCATTTGTACAT
ACAAGCATGATTGTTTTTCCCCACTTTGATTGTGCTTGTGTATAGTTTGTAAATTTTTTG
TAGAGCTCGTGAGATGAGAGCATAGGTGCTTAGAGCACTACCTGGACATAACTGGAAAGC
AGTGGCTTTAGAGCTGAGAAATGTGATACCCACTGCAACCCAGTTGCCTGGCATTCTGGC
ACGCTTGCTAAAGCAGTGATACCACTACACCAGTTTATTATTATTCCAGAT

consensusID : consensus_6119#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 568
fasta sequence 
                              [ATCACTGCCAGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACCTATCGGCCATGCGGCCTCCATAATGGCCGACGTTCTGGAAAACGCCGAGAATAACGGCATCATCACAGCGTCGCAGAAGAGGACCCTCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGGCATACTTCCACGTTGATTGGAGGCTTCTTTTTGAGCCCCTGCCAAACTGGACATGATCATTTGTACATACAAGCATGATTGTTTTTCCCCACTTTGATTGTGCTTGTGTATAGTTTGTAAATTTTTTGTAGAGCTCGTGAGATGAGAGCATAGGTGCTTAGAGCCCTACCTGGACATAACTGGAAAGCAGTGGCTTTAGAGCTGAGAAATGTGCTTAGTGCCTGGCATTCTGGCACGCTTGCTAAAGCAGTGATACCCCTACCCCAGTTTATTATTATTCCAGATTTCCAGTGCTAATCTGCGCTTCTCTTATTCTCATGTGGTGTGATGTGTAATTCACATGGTTGAAGGTTAAGATTTGTATGTGCATCTTGCTTAAATTTAGGAAAACAACATTTTTAAAAC]

[-] EMBL BI305436             [ATCACTGCCAGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACCTATCGGCCATGCGGCCTCCATAATGGCCGACGTTCTGGAAAACGCCGAGAATAACGGCATCATCACAGCGTCGCAGAAGAGGACCCTCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGGCATACTTCCACGTTGATTGGAGGCTTCTTTTTGAGCCCCTGCCAAACTGGACATGATCATTTGTACATACAAGCATGATTGTTTTTCCCCACTTTGATTGTGCTTGTGTATAGTTTGTAAATTTTTTGTAGAGCTCGTGAGATGAGAGCATAGGTGCTTAGAGCCCTACCTGGACATAACTGGAAAGCAGTGGCTTTAGAGCTGAGAAATGTGCTTAGTGCCTGGCATTCTGGCACGCTTGCTAAAGCAGTGATACCCCTACCCCAGTTTATTATTATTCCAGATTTCCAGTGCTAATCTGCGCTTCTCTTATTCTCATGTGGTGTGATGTGTAATTCACATGGTTGAAGGTTAAGATTTGTATGTGCATCTTGCTTAAATTTAGGAAAACAACATTTTTAAAAC]




>consensus_6119#1
ATCACTGCCAGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACCTATCGGCCATGCGGCCT
CCATAATGGCCGACGTTCTGGAAAACGCCGAGAATAACGGCATCATCACAGCGTCGCAGA
AGAGGACCCTCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGGCATACTTCCACGTTGAT
TGGAGGCTTCTTTTTGAGCCCCTGCCAAACTGGACATGATCATTTGTACATACAAGCATG
ATTGTTTTTCCCCACTTTGATTGTGCTTGTGTATAGTTTGTAAATTTTTTGTAGAGCTCG
TGAGATGAGAGCATAGGTGCTTAGAGCCCTACCTGGACATAACTGGAAAGCAGTGGCTTT
AGAGCTGAGAAATGTGCTTAGTGCCTGGCATTCTGGCACGCTTGCTAAAGCAGTGATACC
CCTACCCCAGTTTATTATTATTCCAGATTTCCAGTGCTAATCTGCGCTTCTCTTATTCTC
ATGTGGTGTGATGTGTAATTCACATGGTTGAAGGTTAAGATTTGTATGTGCATCTTGCTT
AAATTTAGGAAAACAACATTTTTAAAAC

consensusID : consensus_6119#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 277
fasta sequence 
                              [TTTATGCAAAAGAGGGAGCAAAGAATATGATGGATAACACATTTGATTATTTTCCATGGGATGTCAAGCTTGAGATAGATGGATCCAAAATTAATATTCCTCAGGACTCTGAAGGTATCCTTGTTGCCAATATTCAGAGCTACATGGGAGGAGTTGACCTGTGGAAGAACGAGGATGATGTTTCTGACAATTTCCACCCTCAGTCAATGCATGACAAGATGCTAGAAGTAGTTAGCTTCACTGGAATGCTGCATCTTGGAAGGCTGCAGGTAGGGCT]

[+] EMBL CB000738             [TTTATGCAAAAGAGGGAGCAAAGAATATGATGGATAACACATTTGATTATTTTCCATGGGATGTCAAGCTTGAGATAGATGGATCCAAAATTAATATTCCTCAGGACTCTGAAGGTATCCTTGTTGCCAATATTCAGAGCTACATGGGAGGAGTTGACCTGTGGAAGAACGAGGATGATGTTTCTGACAATTTCCACCCTCAGTCAATGCATGACAAGATGCTAGAAGTAGTTAGCTTCACTGGAATGCTGCATCTTGGAAGGCTGCAGGTAGGGCT]




>consensus_6119#2
TTTATGCAAAAGAGGGAGCAAAGAATATGATGGATAACACATTTGATTATTTTCCATGGG
ATGTCAAGCTTGAGATAGATGGATCCAAAATTAATATTCCTCAGGACTCTGAAGGTATCC
TTGTTGCCAATATTCAGAGCTACATGGGAGGAGTTGACCTGTGGAAGAACGAGGATGATG
TTTCTGACAATTTCCACCCTCAGTCAATGCATGACAAGATGCTAGAAGTAGTTAGCTTCA
CTGGAATGCTGCATCTTGGAAGGCTGCAGGTAGGGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6119#0      TAATCGATTAATTAATCAATTAATTTAATTACAGCATCTGCAACTTTCGCCTTCTTCCCG 60
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      CAGCATCGAAGCGGAGGAGGGGAAAGGAAGGCGAGAGAGAGAGAGAGAGAGAGGAGAGGA 120
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      GAGGAGCGCGTTGCGAAGGCTCTCGAATCGAGCGCGGCAATGCGAGAGAGCGGTTCTTGA 180
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      GCCCCCGCGATTCGATTCTTCCGGTGCAAAGAATGTACAAGATGATGTATCCTAGCTGGA 240
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      ATGACATTTCAGTGTACATATCTGAGTATTGGTCTGTTATAATTGCTACAGTCATTTTTG 300
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      CATCTGTTACTGGTGTGACAATTTATTATACTGTCAATCAATTGAACAAAAACATCAGCT 360
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TGAGTTTGATGAAAGCTATCAGAGCTAGGGCAAGGAAGTACAAGAAATTGAAAGATAAGG 420
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TCCCTGCCTCTTCCCACATTTGGAGAAAAGAACTTGGCTCTCGTAGTAAAGGTCTGAAAT 480
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      GCTGTGTATGCTTGAAGTCTGTTTCATCTCCGCAGTATATGGGGGGAGTTATCCATCAGT 540
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      GTGATATTTGTGGTGCCACTGCACATCCTAGTTGCTCAGGAAATGCGCACAAAGATTGCA 600
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      AATGTGTTTCTATGGTTGGTTTTGAACATGTCATTCATCAGTGGGCTGTACAGTGGATTG 660
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      ACACATCGGATCGCTCTGAGGAGGATTCTTTCTGCTGCTATTGTGATGAATCTTGCAATG 720
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      GAGCTTTCCTCGCAGGTTCTCCAATTTGGTACTGTATGTGGTGCCAACGGCTAGTGCATG 780
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TTGATTGTCACAACAACCTATCTATAGAAACTGGTGATATCTGTGACTTGGGCCCCTTGA 840
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      AGCGGCTAATATTGTCACCTCTTTGTGTTAAGGAGCTCCATTGGACAGGTGCAGCAGGAC 900
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TTATCAGTTCTATAACACATGGGGCTAATGAATTGGCTTCCAATGTCCGAGAGAGGATCA 960
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      GGAGTCGCGGTAAAAAGTACAGAAAGGGTACCATTTCTGTTGATTCAGATAGCTCTGGTA 1020
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      CTATTGACCCGCCATCTGATATTGAAGGAGATTCACAAGAAACAAACAATGCAGCTAAAA 1080
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      GGAGAGAGGATCATGCCAATGGTGAACTTCCTGAAGTACATGAAAGCTCTGAATCAGAGA 1140
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      ATGATAAACAGCTGTTGACAGAAAACAAAACTAGCATACCGAACGGCCAACATGAGGATT 1200
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      CACACGTACACAATAATCAGAAATATGAAATCGTGGATGTGCCTTCTGATTCTAGGCCAT 1260
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TGCTAGTGTTTATTAACAAGAGAAGTGGAGCACAGTGTGGTGATTCACTGAGACAACGTT 1320
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TGCAGATCCTTCTTAATCCTATCCAGGTTTTTGAGCTGGGTAAACAGCAAGGACCAGAAG 1380
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TTGGTTTGACTTTGTTTAGGAAGGTACCCCACTTCAGAGTTCTTGTTTGTGGTGGAGATG 1440
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      GCACCGTTGCTTGGGTCCTGGATGCCATTGAGAAACAGAAGTTTGAAGCTCCACCACCTG 1500
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TGGCCATCCTTCCAGCTGGTACTGGTAATGATCTTGCCAGGGTTTTGTCTTGGGGTGGTG 1560
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      GTCTCGGAATTGTTGAGAAACAGGGAGGTCTGTTCTCTGTTTTAAAAGATGTCGAGCATG 1620
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      CAGCAGTTACTGTTCTTGATAGATGGAAGATCACAATAAAAGACAACCAAGGGAAGCTTA 1680
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TGTCACAACCAAAATATATGAACAACTACTTTGGGGTTGGCTGTGATGCAAAGGTTGCTT 1740
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      TAGATATCCACAATCTGAGGGAGGAAAACCCTGAACGTTTTTATAGTCAGTTTATGAACA 1800
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      -------ATCACTGCCAGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACCTATCGGCCAT 53
                                                                                  

consensus_6119#0      AGGTGCTTTATG-CAAAAGAGGGAGCAAAGAATATGATGGATAACA-CATT-TGATTATT 1857
consensus_6119#2      ------TTTATG-CAAAAGAGGGAGCAAAGAATATGATGGATAACA-CATT-TGATTATT 51
consensus_6119#1      GCGGCCTCCATAATGGCCGACGTTCTGGAAAACGCCGAGAATAACGGCATCATCACAGCG 113
                            *  **       ** *      * **      * *****  ***  * *     

consensus_6119#0      TTCCATGGGATGTCAAGCTTGAGATAGATGGATCCAAAATTAATATTCCTCAG------- 1910
consensus_6119#2      TTCCATGGGATGTCAAGCTTGAGATAGATGGATCCAAAATTAATATTCCTCAGGACTCTG 111
consensus_6119#1      TCGCAGAAGAGGACCCTCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGGCATACTTCCA 173
                      *  **   ** * *   * *     * ** * * * *   *  * *    **        

consensus_6119#0      --------------------------AGCTACATGGGAGGAGTTGACC-TGTGGAAGAAC 1943
consensus_6119#2      AAGGTATCCTTGTTGCCAATATTCAGAGCTACATGGGAGGAGTTGACC-TGTGGAAGAAC 170
consensus_6119#1      CGTTGATTGGAGGCTTCTTTTTGAGCCCCTGCCAAACTGGACATGATCATTTGTACATAC 233
                                                  ** *      ***  *** * * ** *   **

consensus_6119#0      GAGGATGAT-GTTTCTGACAATTTCCACCCT--CAGTCAATGCATGACAAGATGCTAGAA 2000
consensus_6119#2      GAGGATGAT-GTTTCTGACAATTTCCACCCT--CAGTCAATGCATGACAAGATGCTAGAA 227
consensus_6119#1      AAGCATGATTGTTTTTCCCCACTTTGATTGTGCTTGTGTATAGTTTGTAAATTTTTTGTA 293
                       ** ***** **** *  * * **  *   *    **  **   *   **  *  * * *

consensus_6119#0      GTAGTTAGCTTCACTGGAATGCTGCATCTTGGAAGGCTGC--AGGTAGGGCTTTCTCGCG 2058
consensus_6119#2      GTAGTTAGCTTCACTGGAATGCTGCATCTTGGAAGGCTGC--AGGTAGGGCT-------- 277
consensus_6119#1      G-AGCTCGTGAGATGAGAGCATAGGTGCTTAGAGCCCTACCTGGACATAACTGGAAAGCA 352
                      * ** * *    *   **     *   *** **   ** *   *  *   **        

consensus_6119#0      CGCAGAGGTTAGCTCAAGGTCATCATATAAAGATCGAGATCAAAACTAAAATGCCCATTC 2118
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      GTGGCTTTAGAGCTGAGAAATGTGCTTAGTGCCTGGCATTCTGGCACGCTTGCTAAAGCA 412
                                                                                  

consensus_6119#0      AAGTCGATGGAGAGCCTTGGTCGCAGGATCCATGCACCATAGTAGTTTCACATCACTGCC 2178
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      GTGATACCCCTACCCCAGTTTATTATTATTCCAGATTTCCAGTGCTAATCTGCGCTTCTC 472
                                                                                  

consensus_6119#0      AGGCTTTCATGCTGAAGAGAGTCTCCGAAGAACCTATCGGCCATGCGGCCTCCATAATGG 2238
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      TTATTCTCATGTGGTGTGATGTGTAATTCACATGGTTGAAGGTTAAGATTTGTATGTGCA 532
                                                                                  

consensus_6119#0      CCGACGTTCTGGAAAACGCCGAGAATAACGGCATCATCACAGCGTCGCAGAAGAGGACCC 2298
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      TCTTGCTTAAATTTAGGAAAACAACATTTTTAAAAC------------------------ 568
                                                                                  

consensus_6119#0      TCCTCCACGAAATAGCTTCTAGGCTTTTGTAGGGCATACTTCCACGTTGATTGGAGGCTT 2358
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      CTTTCTGAGCCCCTGCCAAACTGGACATGATCATTTGTACATACAAGCATGATTGTTTTT 2418
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      CCCCACTTTGATTGTGCTTGTGTATAGTTTGTAAATTTTTTGTAGAGCTCGTGAGATGAG 2478
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      AGCATAGGTGCTTAGAGCACTACCTGGACATAACTGGAAAGCAGTGGCTTTAGAGCTGAG 2538
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      AAATGTGATACCCACTGCAACCCAGTTGCCTGGCATTCTGGCACGCTTGCTAAAGCAGTG 2598
consensus_6119#2      ------------------------------------------------------------
consensus_6119#1      ------------------------------------------------------------
                                                                                  

consensus_6119#0      ATACCACTACACCAGTTTATTATTATTCCAGAT 2631
consensus_6119#2      ---------------------------------
consensus_6119#1      ---------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)