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Oryza sativa
cluster # 6146 cluster # 6146       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6146#0 length = 3542 sequences # 3  
 consensus_6146#1 length = 830 sequences # 1  
consensusID : consensus_6146#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3542
fasta sequence 
                              [TCCGGCTAGCCAGAGAAGATCTTTCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAATCTTCTCCTGATGGCTCAAATGCTACCGATGCTTTGACAAATGAAGGATCTAGCCATCATGACAAAAGGGATGCCAAAATTTCAACATTAGGTCCTCTTAAGGATAACGAACGGAAAGATCTGAACTGTGCTGTCAAAGAATACTTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTTTCATTGAGGAGGTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTCGTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCGCGAAAATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAGAGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACACAAGGACATAAAAGAGAAGGAGAAAACGGTTCAAGACTTGAAGCAATCATTGGATGTCCAGAGGAAGGAGTTGAATGATTGTAGAGCTGAAATTACGTCCCTTAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTGATGGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGCAGTGAACATGACAATCTAAAAGGATCCGAATCCATAACAAGTAAGCTAGCATCGGAGGTGAGTCTAGCTGAGGGTAAAAAGAAAGATCATGAAAATATGGAAAGTAGCCTTGAAGGTTCCCCAGGTCCAGAAGCAGAAGTTTCCTGCTCAACTGCTGAGAACAGTGGCTATGGCACTTCAGGAGAAGATAAATCTGGCACAAACACTTGCTTTGAAGATTTATCTGTCAATGGCAATCTGCATGGATCTGGTAATAGCCAGGGGGATTCAGATAGCATATCTGTTTATCTAACTGACGATAAAGTTCATACCGAGAAAGTAGAGAGTCCTTATAAACAAAAATCATCAGATAAGATGGCTTTGGAGACTATCAAAATAGTTTCGGATGCTCTTCCAAAGATTGTTCCTTATGTGCTTATAAACCATCGTGAGGAGCTTCTTCCGTTGATCATCTGTGCCATAGAAAAACATCCAGATAGTGATGTACGTGATTCCTTAACTCATACGTTGTTCAATCTAATCAAACGTCCTGATGGACAACAGAGACGCATCATAATGGATGCTTGTGTGGAGCTTGCTAAGAGTGTAGGTGAGATGAGGACAGAAACTGAGTTACTTCCACAATGTTGGGAACAGATAAATCACCAATATGAGGAGCGTAGGTTGCTTGTTGCCCAGTCCTGTGGAGAATTAGCAGTATATGTTCGTCCTGAGATACGTGATTCCCTTATCTTATCCATTGTGCAACAACTTGTTGAAGATTCTGCAACGGTTGTAAGGGAAGCTGCAACACATAACCTCACATTGCTGCTTCCTCTGTTTCCAAATCTGGATAAATATTATAAGGTTGAGGAGCTAATGTTCCAGTTGGTCTGTGACCCTTCGGGGGCTGTTGTGAATGTTGCTCTCAAGGAACTTGTTCCTGCTGTTGTAAGATGGGGAGATAAACTGGATCAGATATTGAGAATCTTACTGGCACATATCCTGGCATCCGCTCAGCGCTGTCCGCCCGTTTCAGGGGTTGAAGGTGCAATAGACTCTCATCTCCGTGTTTTAGGAGAGCAAGAGCGTTGGAACATTGATGTCCTCCTCCGCATGTTGACCGAGTTGCTACCATTTATTCACCAGAAAGCTATATCTACTTGCCCGTTTGCTGCTGATCCTTCTACAGGCACTATGCCAGAAAGCTACTTCTCAAAATCCTGCCTAAAACTGTATGCAGCAGGTGACACAGAGTGGTCAGCATTTGAATGGATGCACACTGAGTGTCTACCGGATTTGATCAAGCTTGCTTGCCTGTTGCCTGCTAAAGAGGATAACTTAAGAACGGTGATCAGGAAGTACCTATTGGATGTATCGGGACGTTATGGCATAGATTATCTGGAACACGTTATGCTACCTGTATTTCTTGTAGCAGCGGGGGATATTGACAGCAGTGATTTCACCTATTTTCCTCTGGCAACCCAGTCTAGAGTTCGTGGTTTGCGTCCAAAAACTTCTATTGCCGAAAAACTTGGAATTGTGTGTGTCCTTCCATTGTTGTTATCTGGTATTTTGGGTTATCCTTCAAAACGTCAACAATTAGAAGAATATTTGAGAAAATTACTTATCCAGAACACGAAGGATGGTTCATTTTCTATGCATCACACTGCTGAGATCATTGACGCAGTTCGGTTCCTTTGCATGTTTGAGGAGCACCATGTTGCTGTATTTAATATTGTGTGGGAGATGGTTGTGATCTCTGATGCCAACCTAAAAACCAATGCTGCAGCTCTACTGAAAGCACTTGTACCCTACATCAGTGTGAAAGTAGCATCAACTCATGTTTTGCCAGCACTTATAACCCTTGGTTCTGATCAAAACTTGACGGTAAAATATGCTAGTATAGAAGCATTTGGAGCTGTTGCTCAGCATTTTAAAAATGACATGGTTGTTGACAAGATACGAATTCAAATGGATGCTTTTCTTGAAGATGGATCACATGAAGCTACTGTTTCTGTTATTCGTGCACTTGCAGTGGCAGTGCCACATACAACAGATAGACTACGTGAATATCTTTTAACTAAGATATTTAAGCTAACGAGCGCCCCACCTACTGGAAATGATATTGAGCGGCGTCGTGAGATAGCAAATGTATTCTGTGAAGCACTGCGTGCTGTGGATGCTACAGATCTTCCTGCTACAAGCGTACGTGATCTGCTTTTGCCGTCAATACAGAACTTGTTAAAAGATCTGGATGCTCTAGACCCTGCACACAAGGAAGCACTAGAAGTTATAGCCCGCGAAAGGTCGGGAGGTAAACTTGAGAGCCTTGGCAAGGTAATGGGAGCACATCTTGGGATTGCATCATCGATGAGCAGCTTCTTTGGTGAGAGCAGCCTCCTTGTGAAGAAAGAGAGCGGGGAACAACATGATACTGCTGCCACGACCCCCTCTCAGCCTACCCCACAAACTCAGCAAGAGAACACAAGGTTTGGTCGTATAATGCTGGGTGGTTTTGGAGATATGTTACGAGGCAAAGCAAAAGGCAGCGATGAG-CCCAGTTAAAATTTAACAAATACATGCCCAGTTGTTAATTCTTCATATTTTTTTCCAGCTCCATTTTCTCTGGTAACATGTGCTTTTTCACAACCATCAAGGTGGAAATTCTTTTTATTCATTGTTGGTAAGGCGGGGAGGTCACGGTAGACAGAAAATACATTTTCCGTTGCTGAGAGTAAAGCATACATATTTTTGTTGTAATCCTAGGTCAAACTTTCTGTATAGAAAACAGGTAAATCATGTTGTACATTCTGATCAGAGTACAGTTTTAGTAATGCAAACTTTACACTGAGT]

[+] EMBL AK121086             [TCCGGCTAGCCAGAGAAGATCTTTCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAATCTTCTCCTGATGGCTCAAATGCTACCGATGCTTTGACAAATGAAGGATCTAGCCATCATGACAAAAGGGATGCCAAAATTTCAACATTAGGTCCTCTTAAGGATAACGAACGGAAAGATCTGAACTGTGCTGTCAAAGAATACTTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTTTCATTGAGGAGGTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTCGTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCGCGAAAATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAGAGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACACAAGGACATAAAAGAGAAGGAGAAAACGGTTCAAGACTTGAAGCAATCATTGGATGTCCAGAGGAAGGAGTTGAATGATTGTAGAGCTGAAATTACGTCCCTTAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTGATGGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGCAGTGAACATGACAATCTAAAAGGATCCGAATCCATAACAAGTAAGCTAGCATCGGAGGTGAGTCTAGCTGAGGGTAAAAAGAAAGATCATGAAAATATGGAAAGTAGCCTTGAAGGTTCCCCAGGTCCAGAAGCAGAAGTTTCCTGCTCAACTGCTGAGAACAGTGGCTATGGCACTTCAGGAGAAGATAAATCTGGCACAAACACTTGCTTTGAAGATTTATCTGTCAATGGCAATCTGCATGGATCTGGTAATAGCCAGGGGGATTCAGATAGCATATCTGTTTATCTAACTGACGATAAAGTTCATACCGAGAAAGTAGAGAGTCCTTATAAACAAAAATCATCAGATAAGATGGCTTTGGAGACTATCAAAATAGTTTCGGATGCTCTTCCAAAGATTGTTCCTTATGTGCTTATAAACCATCGTGAGGAGCTTCTTCCGTTGATCATCTGTGCCATAGAAAAACATCCAGATAGTGATGTACGTGATTCCTTAACTCATACGTTGTTCAATCTAATCAAACGTCCTGATGGACAACAGAGACGCATCATAATGGATGCTTGTGTGGAGCTTGCTAAGAGTGTAGGTGAGATGAGGACAGAAACTGAGTTACTTCCACAATGTTGGGAACAGATAAATCACCAATATGAGGAGCGTAGGTTGCTTGTTGCCCAGTCCTGTGGAGAATTAGCAGTATATGTTCGTCCTGAGATACGTGATTCCCTTATCTTATCCATTGTGCAACAACTTGTTGAAGATTCTGCAACGGTTGTAAGGGAAGCTGCAACACATAACCTCACATTGCTGCTTCCTCTGTTTCCAAATCTGGATAAATATTATAAGGTTGAGGAGCTAATGTTCCAGTTGGTCTGTGACCCTTCGGGGGCTGTTGTGAATGTTGCTCTCAAGGAACTTGTTCCTGCTGTTGTAAGATGGGGAGATAAACTGGATCAGATATTGAGAATCTTACTGGCACATATCCTGGCATCCGCTCAGCGCTGTCCGCCCGTTTCAGGGGTTGAAGGTGCAATAGACTCTCATCTCCGTGTTTTAGGAGAGCAAGAGCGTTGGAACATTGATGTCCTCCTCCGCATGTTGACCGAGTTGCTACCATTTATTCACCAGAAAGCTATATCTACTTGCCCGTTTGCTGCTGATCCTTCTACAGGCACTATGCCAGAAAGCTACTTCTCAAAATCCTGCCTAAAACTGTATGCAGCAGGTGACACAGAGTGGTCAGCATTTGAATGGATGCACACTGAGTGTCTACCGGATTTGATCAAGCTTGCTTGCCTGTTGCCTGCTAAAGAGGATAACTTAAGAACGGTGATCAGGAAGTACCTATTGGATGTATCGGGACGTTATGGCATAGATTATCTGGAACACGTTATGCTACCTGTATTTCTTGTAGCAGCGGGGGATATTGACAGCAGTGATTTCACCTATTTTCCTCTGGCAACCCAGTCTAGAGTTCGTGGTTTGCGTCCAAAAACTTCTATTGCCGAAAAACTTGGAATTGTGTGTGTCCTTCCATTGTTGTTATCTGGTATTTTGGGTTATCCTTCAAAACGTCAACAATTAGAAGAATATTTGAGAAAATTACTTATCCAGAACACGAAGGATGGTTCATTTTCTATGCATCACACTGCTGAGATCATTGACGCAGTTCGGTTCCTTTGCATGTTTGAGGAGCACCATGTTGCTGTATTTAATATTGTGTGGGAGATGGTTGTGATCTCTGATGCCAACCTAAAAACCAATGCTGCAGCTCTACTGAAAGCACTTGTACCCTACATCAGTGTGAAAGTAGCATCAACTCATGTTTTGCCAGCACTTATAACCCTTGGTTCTGATCAAAACTTGACGGTAAAATATGCTAGTATAGAAGCATTTGGAGCTGTTGCTCAGCATTTTAAAAATGACATGGTTGTTGACAAGATACGAATTCAAATGGATGCTTTTCTTGAAGATGGATCACATGAAGCTACTGTTTCTGTTATTCGTGCACTTGCAGTGGCAGTGCCACATACAACAGATAGACTACGTGAATATCTTTTAACTAAGATATTTAAGCTAACGAGCGCCCCACCTACTGGAAATGATATTGAGCGGCGTCGTGAGATAGCAAATGTATTCTGTGAAGCACTGCGTGCTGTGGATGCTACAGATCTTCCTGCTACAAGCGTACGTGATCTGCTTTTGCCGTCAATACAGAACTTGTTAAAAGATCTGGATGCTCTAGACCCTGCACACAAGGAAGCACTAGAAGTTATAGCCCGCGAAAGGTCGGGAGGTAAACTTGAGAGCCTTGGCAAGGTAATGGGAGCACATCTTGGGATTGCATCATCGATGAGCAGCTTCTTTGGTGAGAGCAGCCTCCTTGTGAAGAAAGAGAGCGGGGAACAACATGATACTGCTGCCACGACCCCCTCTCAGCCTACCCCACAAACTCAGCAAGAGAACACAAGGTTTGGTCGTATAATGCTGGGTGGTTTTGGAGATATGTTACGAGGCAAAGCAAAAGGCAGCGATGAG CCCAGTTAAAATTTAACAAATACATGCCCAGTTGTTAATTCTTCATATTTTTTTCCAGCTCCATTTTCTCTGGTAACATGTGCTTTTTCACAACCATCAAGGTGGAAATTCTTTTTATTCATTGTTGGTAAGGCGGGGAGGTCACGGTAGACAGAAAATACATTTTCCGTTGCTGAGAGTAAAGCATACATATTTTTGTTGTAATCCTAGGTCAAACTTTCTGTATAGAAAACAGGTAAATCATGTTGTACATTCTGATCAGAGTA                               ]
[-] EMBL CB650890             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACAACAGATAGACTACGTGAATATCTTTTAACTAAGATATTTAAGCTAACGAGCGCCCCACCTACTGGAAATGATATTGAGCGGCGTCGTGAGATAGCAAATGTATTCTGTGAAGCACTGCGTGCTGTGGATGCTACAGATCTTCCTGCTACAAGCGTACGTGATCTGCTTTTGCCGTCAATACAGAACTTGTTAAAAGATCTGGATGCTCTAGACCCTGCACACAAGGAAGCACTAGAAGTTATAGCCCGCGAAAGGTCGGGAGGTAAACTTGAGAGCCTTGGCAAGGTAATGGGAGCACATCTTGGGATTGCATCATCGATGAGCAGCTTCTTTGGTGAGAGCAGCCTCCTTGTGAAGAAAGAGAGCGGGGAACAACATGATACTGCTGCCACGACCCCCTCTCAGCCTACCCCACAAACTCAGCAAGAGAACACAAGGTTTGGTCGTATAATGCTGGGTGGTTTTGGAGATATGTTACGAGGCAAAGCAAAAGGCAGCGATGAG CCCAGTTAAAATTTAACAAATACATGCCCAGTTGTTAATTCTTCATATTTTTTTCCAGCTCCATTTTCTCTGGTAACATGTGCTTTTTCACAACCATCAAGGTGGAAATTCTTTTTATTCATTGTTGGTAAGGCGGGGAGGTCACGGTAGACAGAAAATACATTTTCCGTTGCTGAGAGTAAAGCATACATATTTTTGTTGTAATCCTAGGTCAAACTTTCTGTATAGAAAACAGGTAAATCATGTTGTACATTCTGATCAGAGTACAGTTTTAGTAATGCAAACTTTACACTGAGT]
[+] EMBL AA751319             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATACTGCTGCCACGACCCCCTCTCAGCCTACCCCACAAACTCAGCAAGAGAACACAAGGTTTGGTCGTATAATGCTGGGTGGTTTTGGAGATATGTTACGAGGCAAAGCAAAAGGCAGCGATGAGTCCCAGTTAAAATTTAACAAATACATGCCCAGTTGTTAATT                                                                                                                                                                                                                                                                 ]




>consensus_6146#0
TCCGGCTAGCCAGAGAAGATCTTTCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAAT
CTTCTCCTGATGGCTCAAATGCTACCGATGCTTTGACAAATGAAGGATCTAGCCATCATG
ACAAAAGGGATGCCAAAATTTCAACATTAGGTCCTCTTAAGGATAACGAACGGAAAGATC
TGAACTGTGCTGTCAAAGAATACTTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTT
TCATTGAGGAGGTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGC
CTGATGCCCTTCGTCGTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGG
AAAAGATTTCTATTCTCCGCGAAAATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTG
CTGAAAAAGATGCTTTGATAAAGAGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAA
GAAAGTCTTTGGAAGCTGCACACAAGGACATAAAAGAGAAGGAGAAAACGGTTCAAGACT
TGAAGCAATCATTGGATGTCCAGAGGAAGGAGTTGAATGATTGTAGAGCTGAAATTACGT
CCCTTAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTG
ATGGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGCAGTGAACATGACA
ATCTAAAAGGATCCGAATCCATAACAAGTAAGCTAGCATCGGAGGTGAGTCTAGCTGAGG
GTAAAAAGAAAGATCATGAAAATATGGAAAGTAGCCTTGAAGGTTCCCCAGGTCCAGAAG
CAGAAGTTTCCTGCTCAACTGCTGAGAACAGTGGCTATGGCACTTCAGGAGAAGATAAAT
CTGGCACAAACACTTGCTTTGAAGATTTATCTGTCAATGGCAATCTGCATGGATCTGGTA
ATAGCCAGGGGGATTCAGATAGCATATCTGTTTATCTAACTGACGATAAAGTTCATACCG
AGAAAGTAGAGAGTCCTTATAAACAAAAATCATCAGATAAGATGGCTTTGGAGACTATCA
AAATAGTTTCGGATGCTCTTCCAAAGATTGTTCCTTATGTGCTTATAAACCATCGTGAGG
AGCTTCTTCCGTTGATCATCTGTGCCATAGAAAAACATCCAGATAGTGATGTACGTGATT
CCTTAACTCATACGTTGTTCAATCTAATCAAACGTCCTGATGGACAACAGAGACGCATCA
TAATGGATGCTTGTGTGGAGCTTGCTAAGAGTGTAGGTGAGATGAGGACAGAAACTGAGT
TACTTCCACAATGTTGGGAACAGATAAATCACCAATATGAGGAGCGTAGGTTGCTTGTTG
CCCAGTCCTGTGGAGAATTAGCAGTATATGTTCGTCCTGAGATACGTGATTCCCTTATCT
TATCCATTGTGCAACAACTTGTTGAAGATTCTGCAACGGTTGTAAGGGAAGCTGCAACAC
ATAACCTCACATTGCTGCTTCCTCTGTTTCCAAATCTGGATAAATATTATAAGGTTGAGG
AGCTAATGTTCCAGTTGGTCTGTGACCCTTCGGGGGCTGTTGTGAATGTTGCTCTCAAGG
AACTTGTTCCTGCTGTTGTAAGATGGGGAGATAAACTGGATCAGATATTGAGAATCTTAC
TGGCACATATCCTGGCATCCGCTCAGCGCTGTCCGCCCGTTTCAGGGGTTGAAGGTGCAA
TAGACTCTCATCTCCGTGTTTTAGGAGAGCAAGAGCGTTGGAACATTGATGTCCTCCTCC
GCATGTTGACCGAGTTGCTACCATTTATTCACCAGAAAGCTATATCTACTTGCCCGTTTG
CTGCTGATCCTTCTACAGGCACTATGCCAGAAAGCTACTTCTCAAAATCCTGCCTAAAAC
TGTATGCAGCAGGTGACACAGAGTGGTCAGCATTTGAATGGATGCACACTGAGTGTCTAC
CGGATTTGATCAAGCTTGCTTGCCTGTTGCCTGCTAAAGAGGATAACTTAAGAACGGTGA
TCAGGAAGTACCTATTGGATGTATCGGGACGTTATGGCATAGATTATCTGGAACACGTTA
TGCTACCTGTATTTCTTGTAGCAGCGGGGGATATTGACAGCAGTGATTTCACCTATTTTC
CTCTGGCAACCCAGTCTAGAGTTCGTGGTTTGCGTCCAAAAACTTCTATTGCCGAAAAAC
TTGGAATTGTGTGTGTCCTTCCATTGTTGTTATCTGGTATTTTGGGTTATCCTTCAAAAC
GTCAACAATTAGAAGAATATTTGAGAAAATTACTTATCCAGAACACGAAGGATGGTTCAT
TTTCTATGCATCACACTGCTGAGATCATTGACGCAGTTCGGTTCCTTTGCATGTTTGAGG
AGCACCATGTTGCTGTATTTAATATTGTGTGGGAGATGGTTGTGATCTCTGATGCCAACC
TAAAAACCAATGCTGCAGCTCTACTGAAAGCACTTGTACCCTACATCAGTGTGAAAGTAG
CATCAACTCATGTTTTGCCAGCACTTATAACCCTTGGTTCTGATCAAAACTTGACGGTAA
AATATGCTAGTATAGAAGCATTTGGAGCTGTTGCTCAGCATTTTAAAAATGACATGGTTG
TTGACAAGATACGAATTCAAATGGATGCTTTTCTTGAAGATGGATCACATGAAGCTACTG
TTTCTGTTATTCGTGCACTTGCAGTGGCAGTGCCACATACAACAGATAGACTACGTGAAT
ATCTTTTAACTAAGATATTTAAGCTAACGAGCGCCCCACCTACTGGAAATGATATTGAGC
GGCGTCGTGAGATAGCAAATGTATTCTGTGAAGCACTGCGTGCTGTGGATGCTACAGATC
TTCCTGCTACAAGCGTACGTGATCTGCTTTTGCCGTCAATACAGAACTTGTTAAAAGATC
TGGATGCTCTAGACCCTGCACACAAGGAAGCACTAGAAGTTATAGCCCGCGAAAGGTCGG
GAGGTAAACTTGAGAGCCTTGGCAAGGTAATGGGAGCACATCTTGGGATTGCATCATCGA
TGAGCAGCTTCTTTGGTGAGAGCAGCCTCCTTGTGAAGAAAGAGAGCGGGGAACAACATG
ATACTGCTGCCACGACCCCCTCTCAGCCTACCCCACAAACTCAGCAAGAGAACACAAGGT
TTGGTCGTATAATGCTGGGTGGTTTTGGAGATATGTTACGAGGCAAAGCAAAAGGCAGCG
ATGAGCCCAGTTAAAATTTAACAAATACATGCCCAGTTGTTAATTCTTCATATTTTTTTC
CAGCTCCATTTTCTCTGGTAACATGTGCTTTTTCACAACCATCAAGGTGGAAATTCTTTT
TATTCATTGTTGGTAAGGCGGGGAGGTCACGGTAGACAGAAAATACATTTTCCGTTGCTG
AGAGTAAAGCATACATATTTTTGTTGTAATCCTAGGTCAAACTTTCTGTATAGAAAACAG
GTAAATCATGTTGTACATTCTGATCAGAGTACAGTTTTAGTAATGCAAACTTTACACTGA
GT

consensusID : consensus_6146#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 830
fasta sequence 
                              [GCGGCAGCCTAAAAGTTGGCCCTCACTGATTATGATCTCCGGCTAGCCAGAGAAGATCTTTCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAATCTTCTCCTGATGGCTCAAATGCTACCGATGCTTTGACAAATGAAGGATCTAGCCATCATGACAAAAGGGATGCCAAAATTTCAACATTAGGTCCTCTTAAGGATAATGAACGGAAAGATCTGAACTGTGCTGTCAAAGAATACTTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTTTCATTGAGGAGGTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTCGTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCGCGAAAATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAGAGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACACAAGGACATAAAAGAGAAGGAGAAAACGGTAATGATCTCTCAGAAATAACCCAGTTATCTTATACTTCAATTCTTCTGAACATTGCTACACTGACATTTTAAGAAAGGTTCAAGACTTGAAGCAATCATTGGATGTCCAGAGGAAGGAGTTGAATGATTGTAGAGCTGANATTACGTCCCTTAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTGATGGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGCAGTGAAC]

[+] EMBL CB650889             [GCGGCAGCCTAAAAGTTGGCCCTCACTGATTATGATCTCCGGCTAGCCAGAGAAGATCTTTCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAATCTTCTCCTGATGGCTCAAATGCTACCGATGCTTTGACAAATGAAGGATCTAGCCATCATGACAAAAGGGATGCCAAAATTTCAACATTAGGTCCTCTTAAGGATAATGAACGGAAAGATCTGAACTGTGCTGTCAAAGAATACTTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTTTCATTGAGGAGGTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTCGTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCGCGAAAATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAGAGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACACAAGGACATAAAAGAGAAGGAGAAAACGGTAATGATCTCTCAGAAATAACCCAGTTATCTTATACTTCAATTCTTCTGAACATTGCTACACTGACATTTTAAGAAAGGTTCAAGACTTGAAGCAATCATTGGATGTCCAGAGGAAGGAGTTGAATGATTGTAGAGCTGANATTACGTCCCTTAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTGATGGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGCAGTGAAC]




>consensus_6146#1
GCGGCAGCCTAAAAGTTGGCCCTCACTGATTATGATCTCCGGCTAGCCAGAGAAGATCTT
TCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAATCTTCTCCTGATGGCTCAAATGCT
ACCGATGCTTTGACAAATGAAGGATCTAGCCATCATGACAAAAGGGATGCCAAAATTTCA
ACATTAGGTCCTCTTAAGGATAATGAACGGAAAGATCTGAACTGTGCTGTCAAAGAATAC
TTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTTTCATTGAGGAGGTTCCTGATCAG
GACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTCGTTACTAC
TATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCGCGAA
AATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAG
AGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACAC
AAGGACATAAAAGAGAAGGAGAAAACGGTAATGATCTCTCAGAAATAACCCAGTTATCTT
ATACTTCAATTCTTCTGAACATTGCTACACTGACATTTTAAGAAAGGTTCAAGACTTGAA
GCAATCATTGGATGTCCAGAGGAAGGAGTTGAATGATTGTAGAGCTGANATTACGTCCCT
TAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTGATGG
TTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGCAGTGAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6146#0      -------------------------------------TCCGGCTAGCCAGAGAAGATCTT 23
consensus_6146#1      GCGGCAGCCTAAAAGTTGGCCCTCACTGATTATGATCTCCGGCTAGCCAGAGAAGATCTT 60
                                                           ***********************

consensus_6146#0      TCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAATCTTCTCCTGATGGCTCAAATGCT 83
consensus_6146#1      TCCAGGTTGAAGCTTGAGTTACAAAAGCAGAAAGAATCTTCTCCTGATGGCTCAAATGCT 120
                      ************************************************************

consensus_6146#0      ACCGATGCTTTGACAAATGAAGGATCTAGCCATCATGACAAAAGGGATGCCAAAATTTCA 143
consensus_6146#1      ACCGATGCTTTGACAAATGAAGGATCTAGCCATCATGACAAAAGGGATGCCAAAATTTCA 180
                      ************************************************************

consensus_6146#0      ACATTAGGTCCTCTTAAGGATAACGAACGGAAAGATCTGAACTGTGCTGTCAAAGAATAC 203
consensus_6146#1      ACATTAGGTCCTCTTAAGGATAATGAACGGAAAGATCTGAACTGTGCTGTCAAAGAATAC 240
                      *********************** ************************************

consensus_6146#0      TTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTTTCATTGAGGAGGTTCCTGATCAG 263
consensus_6146#1      TTGCTTTTGGCTGGGTATCGACTTGCAGCCATGACTTTCATTGAGGAGGTTCCTGATCAG 300
                      ************************************************************

consensus_6146#0      GACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTCGTTACTAC 323
consensus_6146#1      GACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTCGTTACTAC 360
                      ************************************************************

consensus_6146#0      TATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCGCGAA 383
consensus_6146#1      TATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCGCGAA 420
                      ************************************************************

consensus_6146#0      AATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAG 443
consensus_6146#1      AATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAG 480
                      ************************************************************

consensus_6146#0      AGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACAC 503
consensus_6146#1      AGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACAC 540
                      ************************************************************

consensus_6146#0      AAGGACATAAAAGAGAAGGAGAAAACGGT------------------------------- 532
consensus_6146#1      AAGGACATAAAAGAGAAGGAGAAAACGGTAATGATCTCTCAGAAATAACCCAGTTATCTT 600
                      *****************************                               

consensus_6146#0      ------------------------------------------------TCAAGACTTGAA 544
consensus_6146#1      ATACTTCAATTCTTCTGAACATTGCTACACTGACATTTTAAGAAAGGTTCAAGACTTGAA 660
                                                                      ************

consensus_6146#0      GCAATCATTGGATGTCCAGAGGAAGGAGTTGAATGATTGTAGAGCTGAAATTACGTCCCT 604
consensus_6146#1      GCAATCATTGGATGTCCAGAGGAAGGAGTTGAATGATTGTAGAGCTGANATTACGTCCCT 720
                      ************************************************ ***********

consensus_6146#0      TAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTGATGG 664
consensus_6146#1      TAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATTATCTTCTGGAGATACTGATGG 780
                      ************************************************************

consensus_6146#0      TTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGCAGTGAACATGACAATCT 724
consensus_6146#1      TTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGCAGTGAAC---------- 830
                      **************************************************          

consensus_6146#0      AAAAGGATCCGAATCCATAACAAGTAAGCTAGCATCGGAGGTGAGTCTAGCTGAGGGTAA 784
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AAAGAAAGATCATGAAAATATGGAAAGTAGCCTTGAAGGTTCCCCAGGTCCAGAAGCAGA 844
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AGTTTCCTGCTCAACTGCTGAGAACAGTGGCTATGGCACTTCAGGAGAAGATAAATCTGG 904
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CACAAACACTTGCTTTGAAGATTTATCTGTCAATGGCAATCTGCATGGATCTGGTAATAG 964
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CCAGGGGGATTCAGATAGCATATCTGTTTATCTAACTGACGATAAAGTTCATACCGAGAA 1024
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AGTAGAGAGTCCTTATAAACAAAAATCATCAGATAAGATGGCTTTGGAGACTATCAAAAT 1084
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AGTTTCGGATGCTCTTCCAAAGATTGTTCCTTATGTGCTTATAAACCATCGTGAGGAGCT 1144
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TCTTCCGTTGATCATCTGTGCCATAGAAAAACATCCAGATAGTGATGTACGTGATTCCTT 1204
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AACTCATACGTTGTTCAATCTAATCAAACGTCCTGATGGACAACAGAGACGCATCATAAT 1264
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      GGATGCTTGTGTGGAGCTTGCTAAGAGTGTAGGTGAGATGAGGACAGAAACTGAGTTACT 1324
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TCCACAATGTTGGGAACAGATAAATCACCAATATGAGGAGCGTAGGTTGCTTGTTGCCCA 1384
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      GTCCTGTGGAGAATTAGCAGTATATGTTCGTCCTGAGATACGTGATTCCCTTATCTTATC 1444
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CATTGTGCAACAACTTGTTGAAGATTCTGCAACGGTTGTAAGGGAAGCTGCAACACATAA 1504
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CCTCACATTGCTGCTTCCTCTGTTTCCAAATCTGGATAAATATTATAAGGTTGAGGAGCT 1564
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AATGTTCCAGTTGGTCTGTGACCCTTCGGGGGCTGTTGTGAATGTTGCTCTCAAGGAACT 1624
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TGTTCCTGCTGTTGTAAGATGGGGAGATAAACTGGATCAGATATTGAGAATCTTACTGGC 1684
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      ACATATCCTGGCATCCGCTCAGCGCTGTCCGCCCGTTTCAGGGGTTGAAGGTGCAATAGA 1744
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CTCTCATCTCCGTGTTTTAGGAGAGCAAGAGCGTTGGAACATTGATGTCCTCCTCCGCAT 1804
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      GTTGACCGAGTTGCTACCATTTATTCACCAGAAAGCTATATCTACTTGCCCGTTTGCTGC 1864
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TGATCCTTCTACAGGCACTATGCCAGAAAGCTACTTCTCAAAATCCTGCCTAAAACTGTA 1924
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TGCAGCAGGTGACACAGAGTGGTCAGCATTTGAATGGATGCACACTGAGTGTCTACCGGA 1984
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TTTGATCAAGCTTGCTTGCCTGTTGCCTGCTAAAGAGGATAACTTAAGAACGGTGATCAG 2044
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      GAAGTACCTATTGGATGTATCGGGACGTTATGGCATAGATTATCTGGAACACGTTATGCT 2104
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      ACCTGTATTTCTTGTAGCAGCGGGGGATATTGACAGCAGTGATTTCACCTATTTTCCTCT 2164
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      GGCAACCCAGTCTAGAGTTCGTGGTTTGCGTCCAAAAACTTCTATTGCCGAAAAACTTGG 2224
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AATTGTGTGTGTCCTTCCATTGTTGTTATCTGGTATTTTGGGTTATCCTTCAAAACGTCA 2284
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      ACAATTAGAAGAATATTTGAGAAAATTACTTATCCAGAACACGAAGGATGGTTCATTTTC 2344
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TATGCATCACACTGCTGAGATCATTGACGCAGTTCGGTTCCTTTGCATGTTTGAGGAGCA 2404
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CCATGTTGCTGTATTTAATATTGTGTGGGAGATGGTTGTGATCTCTGATGCCAACCTAAA 2464
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AACCAATGCTGCAGCTCTACTGAAAGCACTTGTACCCTACATCAGTGTGAAAGTAGCATC 2524
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      AACTCATGTTTTGCCAGCACTTATAACCCTTGGTTCTGATCAAAACTTGACGGTAAAATA 2584
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TGCTAGTATAGAAGCATTTGGAGCTGTTGCTCAGCATTTTAAAAATGACATGGTTGTTGA 2644
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CAAGATACGAATTCAAATGGATGCTTTTCTTGAAGATGGATCACATGAAGCTACTGTTTC 2704
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TGTTATTCGTGCACTTGCAGTGGCAGTGCCACATACAACAGATAGACTACGTGAATATCT 2764
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TTTAACTAAGATATTTAAGCTAACGAGCGCCCCACCTACTGGAAATGATATTGAGCGGCG 2824
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TCGTGAGATAGCAAATGTATTCTGTGAAGCACTGCGTGCTGTGGATGCTACAGATCTTCC 2884
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TGCTACAAGCGTACGTGATCTGCTTTTGCCGTCAATACAGAACTTGTTAAAAGATCTGGA 2944
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TGCTCTAGACCCTGCACACAAGGAAGCACTAGAAGTTATAGCCCGCGAAAGGTCGGGAGG 3004
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TAAACTTGAGAGCCTTGGCAAGGTAATGGGAGCACATCTTGGGATTGCATCATCGATGAG 3064
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CAGCTTCTTTGGTGAGAGCAGCCTCCTTGTGAAGAAAGAGAGCGGGGAACAACATGATAC 3124
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TGCTGCCACGACCCCCTCTCAGCCTACCCCACAAACTCAGCAAGAGAACACAAGGTTTGG 3184
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TCGTATAATGCTGGGTGGTTTTGGAGATATGTTACGAGGCAAAGCAAAAGGCAGCGATGA 3244
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      GCCCAGTTAAAATTTAACAAATACATGCCCAGTTGTTAATTCTTCATATTTTTTTCCAGC 3304
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TCCATTTTCTCTGGTAACATGTGCTTTTTCACAACCATCAAGGTGGAAATTCTTTTTATT 3364
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      CATTGTTGGTAAGGCGGGGAGGTCACGGTAGACAGAAAATACATTTTCCGTTGCTGAGAG 3424
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      TAAAGCATACATATTTTTGTTGTAATCCTAGGTCAAACTTTCTGTATAGAAAACAGGTAA 3484
consensus_6146#1      ------------------------------------------------------------
                                                                                  

consensus_6146#0      ATCATGTTGTACATTCTGATCAGAGTACAGTTTTAGTAATGCAAACTTTACACTGAGT 3542
consensus_6146#1      ----------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)