cluster # 6159

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Oryza sativa
cluster # 6159 cluster # 6159 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6159#0 length = 711 sequences # 4

consensusID : consensus_6159#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 711
fasta sequence

                              [TGATTTAGACCAATGTTAGTGTTGTTCCTGGTGTGAGTTCTGNCGAAGGTTGCTCTATACATGGGGNTGCGCTTCATGCCCATACATGAAGATGAATTCTTTAAGATCACTGCTTAAAGTATGCCATCAGCTTCCTGACAGAGATAACAGATTAGTTGCCTATCAGGCTAGCCGATTCAATGCTAAGACTCCTCTGGGAAAATTGGTTGCAGAG-GTTGGGTGTGAG-CCCATTTTGCATATGCGACATTTCCAGGCAACAAAGAG-ATTA-CCAGACAAGCTCGTGCACCATGTTATCCATGGTAAAGGAGAACCTACATCATAGATGTTCCTGGAGCTCTATTAATTTCGTCCACCTGGTTACGGAAAACACCACAGTTACCCCGACTGAATGCAACCTTCAGCT-CAAGAGTGCAACTACCAACTTTGTGGCCGATGATGAGATATCCCTGTTCATGGCTTTGCTACTGGTGGAAAAAAGGGAAACCAGAATTTG-CAAGGTTAGATAACA-TTGAGCTGAAAATTGGCGGATAT-G-T-GTAA-G-TGCTAGAGTACACTT-GCGATGTACAACAATTTTGACATTTTGTGTGTTGCATGAGACCGATAGTAAAAACAGCAAAAAAATGTAACCGAAA-CCAGTAGTGTTTGGAGCCTCGGAGCTGGACTGCGGTGGTTTGAAAAGGT--GA-AAGTTGATTAAAAGTACACTCGAAAAAAAAA]

[+] EMBL AU100768             [TGATTTAGACCAATGTTAGTGTTGTTCCTGGTGTGAGTTCTGNCGAAGGTTGCTCTATACATGGGGNTGCGCTTCATGCCCATACATGAAGATGAATTCTTTAAGATCACTGCTTAAAGTATGCCATCAGCTTCCTGACAGAGATAACAGATTAGTTGCCTATCAGGCTAGCCGATTCAATGCTAAGACTCCTCTGGGAAAATTGGTTGCAGAG GTTGGGTGTGAG CCCATTTTGCATATGCGACATTTCCAGGCAACAAAGAG ATTA CCAGACAAGCTCGTGCACCATGTTATCCATGGTAAAGGAGAACCTACATCATAGATGTTCCTGGAGCTCTATTAATTTCGTCCACCTGGTTACGGAAAACACCACAGTTACCCCGACTGAATGCAACCTTCAGCT CAAGAGTGCAACTACCAACTTTGTGGCCGATGATGAGATATCCCTGTTCATGGCTTTGCTACTGGTGGAAAAAAGGGAAACCAGAATTTG CAAGGTTAGATAACA TTGAGCTGAAAATTGGCGGATAT G T GTAA G TGCTAGAGTACACTT GCGATGTACAACAATTTTGACATTTTGTGTGTTGCATGAGACCGATAGTAAAAACAGCAAAAAAAa                                                                                                ]
[+] EMBL BI804120             [                                                                                                                                                             GCCTATCA GCTA CCGATTCAATGCTAAGACTCCTCTGGGAAAATTGGTTGCAGAGTCTTGGGTGTGAG CCCATTTTGCATATGCGACATTT CAGGCAACAAAGAG ATTA CCAGACAAGCTCGTGCACCATGTTATCCATGGTAAAGGAGAACCTACATCATAGATGTTCCTGGAGCTCTATTAATTTCGTCCACCTGGTTACGGAAAACACCACAGTTACCCCGACTGAATGCAACCTTCAGCT CAAGAGTGCAACTACCAACTTTGTGGCCGATGATGAGATATCCCTGTTCATGGCTTTGCTACTGGTGGAAAAAAGGGAAACCAGAATTTG CAAGGTTAGATAACA TTGAGCTGAAAATTGGCGGATAT G T GTAA G TGCTAGAGTACACTTAGCGATGTACAAC ATTTTGACATTTTGTGTGTTGCATGAGACCGATAGTAAAAACAGCACCGGTATGTAACCGAAA CCAGTAGTGTTTGGAGCCTCGGAGCTGGACTGCGGTGGTTTGAAAAGGT  GA AAGTTGATTAAAAGTACACTCGAAAAAAAAA]
[+] EMBL AU166565             [                                                                                                                                                                              ATTCAATGCTAAGACTCCTCTGGGAAAATTGGTTGCAGAG GTTGGGTGTGAG CCCATTTTGCATATGCGACATTTCCAGGCAACAAAGAG ATTA CCAGACAAGCTCGTGCACCATGTTATCCATGGTAAAGGAGAACCTACATCATAGATGTTCCTGGAGCTCTATTAATTTCGTCCACCTGGTTACGGAAAACACCACAGTTACCCCGACTGAATGCAACCTTCAGCT CAAGAGTGCAACTACCAACTTTGTGGCCGATGATGAGATATCCCTGTTCATGGCTTTGCTACTGGTGGAAAAAAGGGAAACCAGAATTTG CAAGGTTAGATAACA TTGAGCTGAAAATTGGCGGATAT G T GTAA G TGCTAGAGTACACTT GCGATGTACAACAATTTTGACATTTTGTGTGTTGCATGAGACCGATAGTAAAAACA  AAAAAAA                                                                                                 ]
[+] EMBL BI803046             [                                                                                                                                                                                                              TTCCAGA  GTT GGT TGAGCCCCATTTTGCATATGCGACATTTCCAGGCAAC AAGAGTATTACCCAGACAAGCTCGTGCACCATGTTATCCATGGTAAAGGAGAACCTACATCATAGATGTTCCTGGAGCTCTATTAATTTCGTCCACCTGGTTACGGAAAACACCACAGTTACCCCGACTGAATGCAACCTTCAGCTCCAAGAGTGCAACTACCAACTTTGTGGCCGATGATGAGATATCCCTGTTCATGGCTTTGCTACTGGTGGAAAAAAGGGAAACCAGAATTTGCCAAGGTTAGATAACACTTGAGCTGAAAATTGGCGGATATCGCTCGTAACGCCCCTAGAGTACACTT GCGATGTACAACAATTTTGACATTTTGTGTGTTGCATGAGACCGATAGTAAAAACAGCACCGGTATGTAACCGAAACCCAGTAGTGTTTGGAGCCTCGGAGCTGGACTGCGGTGGTTTGAAAAGGTCCCACACCTTGATTAAAAGTACACTCGAAAAAAAAA]




>consensus_6159#0
TGATTTAGACCAATGTTAGTGTTGTTCCTGGTGTGAGTTCTGNCGAAGGTTGCTCTATAC
ATGGGGNTGCGCTTCATGCCCATACATGAAGATGAATTCTTTAAGATCACTGCTTAAAGT
ATGCCATCAGCTTCCTGACAGAGATAACAGATTAGTTGCCTATCAGGCTAGCCGATTCAA
TGCTAAGACTCCTCTGGGAAAATTGGTTGCAGAGGTTGGGTGTGAGCCCATTTTGCATAT
GCGACATTTCCAGGCAACAAAGAGATTACCAGACAAGCTCGTGCACCATGTTATCCATGG
TAAAGGAGAACCTACATCATAGATGTTCCTGGAGCTCTATTAATTTCGTCCACCTGGTTA
CGGAAAACACCACAGTTACCCCGACTGAATGCAACCTTCAGCTCAAGAGTGCAACTACCA
ACTTTGTGGCCGATGATGAGATATCCCTGTTCATGGCTTTGCTACTGGTGGAAAAAAGGG
AAACCAGAATTTGCAAGGTTAGATAACATTGAGCTGAAAATTGGCGGATATGTGTAAGTG
CTAGAGTACACTTGCGATGTACAACAATTTTGACATTTTGTGTGTTGCATGAGACCGATA
GTAAAAACAGCAAAAAAATGTAACCGAAACCAGTAGTGTTTGGAGCCTCGGAGCTGGACT
GCGGTGGTTTGAAAAGGTGAAAGTTGATTAAAAGTACACTCGAAAAAAAAA

clustalw multiple alignements is not computed in this case