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Oryza sativa
cluster # 6218 cluster # 6218       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6218#0 length = 3323 sequences # 3  
 consensus_6218#1 length = 436 sequences # 1  
consensusID : consensus_6218#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3323
fasta sequence 
                              [CCTCTGCCTCGGCACGCGGAGAGGTGGAGAAGGCGAACGAGAGAGAGACACCGCCAGTAGCAGCAACAGCAGACACTGCGCGAGAAAGCGAGCGCCAAAGCACAATAAACTAGGGAACGCGCCGCCACGCCACGCCACGCCCACCACCCCGCGCCCGCGCCCGCCGAGACACCGCCGCGCCGCGCCGTGTGCCACGCCACGCCGCGCCGCGCTCAATTCCCCACCGCCACCGCCACCGCCGCCGCCGCCCTCCCCCTCTTCTCCCTTCCGGGTTTTTGCCTTTTTACCGCCCCGCTCTGCCCCCCCCTTCCCCACGCCGCGCCGCCCTCCTCCTCCTCCGCCTCGAACCGGGGCCGCGGCACCCCGGCTGGATCTGGGCCCGAACCCCCGATGGCGTTCGGCGGACTCGCCCTCGCGCTCGCGCTCCTCGTCGTATCAGTGAACTTGCTCCAGGTTGCGAGCTCCGATGGCGACCACGCGCGCTGCGAGGGGGTCGTCAAGGGCTGGGCGGCCTCGGTTGCGGGGAGCGAGGGCAAGGATGGGGACAAGCTGAGCCTCAGGGATCTGCTCTTCTTCCTTCACATTCCTAGAACCGGTGGCCGTACCTACTTCCACTGCTTCCTGAAAAAGCTGTATACCAATGCTGAGGAGTGTCCGCGATCCTACGATAAGCTGCGGTTCGACCCCAGCCATCCTGATTGTAAGCTGGTTGTTAGTCATGATGACTATAGCTTCATGTCCAAGCTGCCAAGTGAGAGGACTTCTGTTGTCACAATACTAAGGAACCCAGTTGACCGAGTATTCAGCACATATGAGTTCTCGGTCGAAGTTGCAGCCAGATTTCTTGTGCATCCAAACTTAACATCTGCAAAGTTAATGACTAGCCGTGTGTTAACAAAATCTCGTGCTGTAAGTACATTGGATATATGGCCTTGGAAATACTTGGTCCCGTGGATGAGAGAAGATCTGTTTGCCAGGGTATGTTTACTTATTTCAGCCAAACCTTTTGCTTAGTATCATCCTTTTCCACTAGTAGGAAAACAACTAGGACAAACTATCAAGCCTGCATTTCTAGATATTGAACCTTTCTATGCCAATGTATTCATCCAATATCAGGTTCTAGAAGGCGCACCTTAAATCTAGTCTTCACCAAAAGCAATCAAACAAACACACATTGCAGCAAAGATAAAGTAGTTGATCCATTCTAACAGTAAATTGAACATCTGCTGCATGGAGCAGACTATAATCAAGCCTCTATTTAATTGAACCTTTATATGCCAATGTATTTATCCAACATCATGATCCACAGGTGCATCTTAAATCTAGTCTTGATTAGAAGCAATCAAACAAAAACACATTGCAATAATCTAGTCAATTGAACCTTTGCTACATGGAGCGGAGACTATATACTTGAACCTTGGAAGCCATCTAGGACATGCCAGTTTCCCAAGAATCAATTTTATTTAACTCCAAGTATCTAAGATAATGCTTATGCTCCAGTGTTTGAATAATAATAATTTAAGGTTTTGTCAGCAGGAAGGTTTTGACTTTCAGGTGGGATCTCTTAAGCTTTTGTAACACCTGAACATCGGTTTTAGTGTCATTGTCCCGCTATTAGTTTACACTTAAGTTGATGTGAGTGATCAGGAAAATAGAGTTCAGAAATTTTTGGAATCAACACACATATAATTACCATTATTATGATGATGATGTTTTCATTGCCTGATGCCTATACTAAACCATTTTTGCAATAATATAAAAGCATACTGTTAATTTGGCAGAGAGATGCTAGGGGGATTGATAAAGTGAGAAGTAGCCACAGGGTTAATGCATATGATGTGGAGGATATGGTTATGCCACTACACCAGTACATTAATGATCCTGTTGCGCATGAAATCATTCATAATGGAGCTACCTTTCAGATTACTGGGCTAACAAACAATTCTTACCTCAGTGGAGCACATGAGGTTCGGCACTGTGTCAGAAAGCACCCTGATCTTGGTCATTTTGTGCTTCAAGTTGCTAAGGTATATACTGAAGAGATGGATGTTGAGAAAAAATGTAGATGTGTGCATTTAATTAGTCAAAGCTCATGAACCACTATTGAACTATTGGATATCCAAAGCATCACTGCATAATAACTAATTGCCATTATTATCCATAGTAGATGGGTACATTATTGTATTAACCATGTCATATCTATTTACTAATCCAAGTTAGATTTCATACTTCCTACCAAAATGAATGCCATTATTTCAAACACAGAGCAGGCTGGACCGTATGCTATATGTAGGACTTACAGAAGAACATGAAGAATCTGCGAGGTTGTTTGCTCATATGGTAGGAGCACAGGTGCTTTCACAATCTGGAGCACTGAACTTAGATATCAAGGACAATCAGCCCACTGGAAATGACTCTCACTCATCCACGCTGGACCCAGAGGACGAAGAAACAAATGAACATCTGAATAGCACACATGGTTCGCAAAATAACCGAGCTCTGAACGCTGCAGACACTGTCAAGGACGATCATGGAAAAGGAAATTTGACTGTTGGTAAGTTGATGGAAGCTTACGAGGGTTGCATTTCAAAACTGCGAAAATCTCAATCTAATCGTCGTAAAATCTCTCTCAGAAAGGTGGAAGGAGCAAACTTTTCGAAGGAGGCACGATGGCAGGTACCAGAGGCGGTTTTGGAGCAAATCATCTCACTAAACAGCCTTGACATGGAACTATATGAGCATGCTAAGAAGATATTTACACAAGAACATCTTATGCTAAAAATTCAGCAGTCCACGGTCATACAACACAAGCAATTGACAGATCAGAAGGGCTGGATAGAAATGGTCTGCAGTTCCTGGAGTTGCTCTCCTTGGAAGGTTGTACTATTTGGTCTTGGGGTCACAATAACCATCGCACTTATCATACTTGCTTTAACAACGAGAAGAAGAACGTTTAAACTTAAGGTCTGATACTCTGATGAAGATCAGGAAGTAGCCTCCCGATTTTGATGTACAGCTTGATACTGCCCAGAGATTAACCTTCGCTATTCCCTCGGGCAAAGATGTTAGCATGCACAGAATCATCACATATACTCCCAACCATGTTAAACCTGGCTCATTGGTAGGGTGGTGGCTTTTACCCGATGTGATCAGTCAATCGACAAATTTTAGGCACTTGTCTATTCGTATGTACATTTGCCTTCTTGACCTTAGGTTGAATTCTCTCAAGGTGTTGGTAGTTGACAAATTGCCTCAGATGAGCAATGAAACAATTGACTGTTTTGCTAGAAAAAGAGAGAAATACAAGATGTCAAAAAAAAAAA]

[+] EMBL AK121981             [CCTCTGCCTCGGCACGCGGAGAGGTGGAGAAGGCGAACGAGAGAGAGACACCGCCAGTAGCAGCAACAGCAGACACTGCGCGAGAAAGCGAGCGCCAAAGCACAATAAACTAGGGAACGCGCCGCCACGCCACGCCACGCCCACCACCCCGCGCCCGCGCCCGCCGAGACACCGCCGCGCCGCGCCGTGTGCCACGCCACGCCGCGCCGCGCTCAATTCCCCACCGCCACCGCCACCGCCGCCGCCGCCCTCCCCCTCTTCTCCCTTCCGGGTTTTTGCCTTTTTACCGCCCCGCTCTGCCCCCCCCTTCCCCACGCCGCGCCGCCCTCCTCCTCCTCCGCCTCGAACCGGGGCCGCGGCACCCCGGCTGGATCTGGGCCCGAACCCCCGATGGCGTTCGGCGGACTCGCCCTCGCGCTCGCGCTCCTCGTCGTATCAGTGAACTTGCTCCAGGTTGCGAGCTCCGATGGCGACCACGCGCGCTGCGAGGGGGTCGTCAAGGGCTGGGCGGCCTCGGTTGCGGGGAGCGAGGGCAAGGATGGGGACAAGCTGAGCCTCAGGGATCTGCTCTTCTTCCTTCACATTCCTAGAACCGGTGGCCGTACCTACTTCCACTGCTTCCTGAAAAAGCTGTATACCAATGCTGAGGAGTGTCCGCGATCCTACGATAAGCTGCGGTTCGACCCCAGCCATCCTGATTGTAAGCTGGTTGTTAGTCATGATGACTATAGCTTCATGTCCAAGCTGCCAAGTGAGAGGACTTCTGTTGTCACAATACTAAGGAACCCAGTTGACCGAGTATTCAGCACATATGAGTTCTCGGTCGAAGTTGCAGCCAGATTTCTTGTGCATCCAAACTTAACATCTGCAAAGTTAATGACTAGCCGTGTGTTAACAAAATCTCGTGCTGTAAGTACATTGGATATATGGCCTTGGAAATACTTGGTCCCGTGGATGAGAGAAGATCTGTTTGCCAGGGTATGTTTACTTATTTCAGCCAAACCTTTTGCTTAGTATCATCCTTTTCCACTAGTAGGAAAACAACTAGGACAAACTATCAAGCCTGCATTTCTAGATATTGAACCTTTCTATGCCAATGTATTCATCCAATATCAGGTTCTAGAAGGCGCACCTTAAATCTAGTCTTCACCAAAAGCAATCAAACAAACACACATTGCAGCAAAGATAAAGTAGTTGATCCATTCTAACAGTAAATTGAACATCTGCTGCATGGAGCAGACTATAATCAAGCCTCTATTTAATTGAACCTTTATATGCCAATGTATTTATCCAACATCATGATCCACAGGTGCATCTTAAATCTAGTCTTGATTAGAAGCAATCAAACAAAAACACATTGCAATAATCTAGTCAATTGAACCTTTGCTACATGGAGCGGAGACTATATACTTGAACCTTGGAAGCCATCTAGGACATGCCAGTTTCCCAAGAATCAATTTTATTTAACTCCAAGTATCTAAGATAATGCTTATGCTCCAGTGTTTGAATAATAATAATTTAAGGTTTTGTCAGCAGGAAGGTTTTGACTTTCAGGTGGGATCTCTTAAGCTTTTGTAACACCTGAACATCGGTTTTAGTGTCATTGTCCCGCTATTAGTTTACACTTAAGTTGATGTGAGTGATCAGGAAAATAGAGTTCAGAAATTTTTGGAATCAACACACATATAATTACCATTATTATGATGATGATGTTTTCATTGCCTGATGCCTATACTAAACCATTTTTGCAATAATATAAAAGCATACTGTTAATTTGGCAGAGAGATGCTAGGGGGATTGATAAAGTGAGAAGTAGCCACAGGGTTAATGCATATGATGTGGAGGATATGGTTATGCCACTACACCAGTACATTAATGATCCTGTTGCGCATGAAATCATTCATAATGGAGCTACCTTTCAGATTACTGGGCTAACAAACAATTCTTACCTCAGTGGAGCACATGAGGTTCGGCACTGTGTCAGAAAGCACCCTGATCTTGGTCATTTTGTGCTTCAAGTTGCTAAGGTATATACTGAAGAGATGGATGTTGAGAAAAAATGTAGATGTGTGCATTTAATTAGTCAAAGCTCATGAACCACTATTGAACTATTGGATATCCAAAGCATCACTGCATAATAACTAATTGCCATTATTATCCATAGTAGATGGGTACATTATTGTATTAACCATGTCATATCTATTTACTAATCCAAGTTAGATTTCATACTTCCTACCAAAATGAATGCCATTATTTCAAACACAGAGCAGGCTGGACCGTATGCTATATGTAGGACTTACAGAAGAACATGAAGAATCTGCGAGGTTGTTTGCTCATATGGTAGGAGCACAGGTGCTTTCACAATCTGGAGCACTGAACTTAGATATCAAGGACAATCAGCCCACTGGAAATGACTCTCACTCATCCACGCTGGACCCAGAGGACGAAGAAACAAATGAACATCTGAATAGCACACATGGTTCGCAAAATAACCGAGCTCTGAACGCTGCAGACACTGTCAAGGACGATCATGGAAAAGGAAATTTGACTGTTGGTAAGTTGATGGAAGCTTACGAGGGTTGCATTTCAAAACTGCGAAAATCTCAATCTAATCGTCGTAAAATCTCTCTCAGAAAGGTGGAAGGAGCAAACTTTTCGAAGGAGGCACGATGGCAGGTACCAGAGGCGGTTTTGGAGCAAATCATCTCACTAAACAGCCTTGACATGGAACTATATGAGCATGCTAAGAAGATATTTACACAAGAACATCTTATGCTAAAAATTCAGCAGTCCACGGTCATACAACACAAGCAATTGACAGATCAGAAGGGCTGGATAGAAATGGTCTGCAGTTCCTGGAGTTGCTCTCCTTGGAAGGTTGTACTATTTGGTCTTGGGGTCACAATAACCATCGCACTTATCATACTTGCTTTAACAACGAGAAGAAGAACGTTTAAACTTAAGGTCTGATACTCTGATGAAGATCAGGAAGTAGCCTCCCGATTTTGATGTACAGCTTGATACTGCCCAGAGATTAACCTTCGCTATTCCCTCGGGCAAAGATGTTAGCATGCACAGAATCATCACATATACTCCCAACCATGTTAAACCTGGCTCATTGGTAGGGTGGTGGCTTTTACCCGATGTGATCAGTCAATCGACAAATTTTAGGCACTTGTCTATTCGTATGTACATTTGCCTTCTTGACCTTAGGTTGAATTCTCTCAAGGTGTTGGTAGTTGACAAATTGCCTCAGATGAGCAATGAAACAATTGACTGTTTTGCTAGAAAAAGAGAGAAATACA                  ]
[-] EMBL CA759041             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGAAAGGTGGAAGAGGCAAACTTTTCGAAGGAGGCACGATGGCAGGTACCAGAGGCGG TTTGGAGCAAATCATCTCACTAAACAGCCTTGACATGGAACTATATGAGCATGCTAAGAAGATATTTACACAAGAACATCTTATGCTAAAAATTCAGCAGTCCACGGTCATACAACACAAGCAATTGACAGATCAGAAGGGCTGGATAGAAATGGTCTGCAGTTCCTGGAGTTGCTCTCCTTGGAAGGTTGTACTATTTGGTCTTGGGGTCACAATAACCATCGCACTTATCATACTTGCTTTAACAACGAGAAGAAGAACGTTTAAACTTAAGGTCTGATACTCTGATGAAGATCAGGAAGTAGCCTCCCGATTTTGATGTACAGCTTGATACTGCCCAGAGATTAACCTTCGCTATTCCCTCGGGCAAAGATGTTAGCATGCACAGAATCATCACATATACTCCCAACCATGTTAAACCTGGCTCATTGGTAGGGTGGTGGCTTTTACCCGATGTGATCAGTCAATCGACAAATTTTAGGCACTTGTCTATTCGTATGTACATTTGCCTTCTTGACCTTAGGTTGAATTCTCTCAAGGTGTTGGTAGTTGACAAATTGCCTCAGATGAGCAATGAAACAATTGACTGTTTTGCTAGAAAAAGAGAGAAATACAAGATGTCAAAAAAAAAAA]
[+] EMBL BE229435             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  cgagTAAACAGCCTTTTCATGGAACTATATGAGCATGCTAAGAGGATATTTACACAAGAACATCTTATGCTAAAAATTCAGCAGTCCACGGTCATACAACACAAGCAATTGACAGATCAGAAGGGCTGGATAGAAATGGTCTGCAGTTCCTGGAGTTGCTCTCCTTGGAAGGTTGTACTATTTGGTCTTGGGGTCACAATAACCATCGCACTTATCATACTTGCTTTAACAACGAGAAGAAGAACGTTTAAACTTAAGGTCTGATACTCTGATGAAGAWCAGG AGTAGCCTCCCGATTTTGATGTACAGCTTGATACTKCCCAGAGATTAACCTTCGCTATTCCCTCGGGCAAAGATGTTAGCATGCACAGAATCATCACATATACTCCCAACCATGTTAAACCYGGCTCATTG                                                                                                                                                                                                          ]




>consensus_6218#0
CCTCTGCCTCGGCACGCGGAGAGGTGGAGAAGGCGAACGAGAGAGAGACACCGCCAGTAG
CAGCAACAGCAGACACTGCGCGAGAAAGCGAGCGCCAAAGCACAATAAACTAGGGAACGC
GCCGCCACGCCACGCCACGCCCACCACCCCGCGCCCGCGCCCGCCGAGACACCGCCGCGC
CGCGCCGTGTGCCACGCCACGCCGCGCCGCGCTCAATTCCCCACCGCCACCGCCACCGCC
GCCGCCGCCCTCCCCCTCTTCTCCCTTCCGGGTTTTTGCCTTTTTACCGCCCCGCTCTGC
CCCCCCCTTCCCCACGCCGCGCCGCCCTCCTCCTCCTCCGCCTCGAACCGGGGCCGCGGC
ACCCCGGCTGGATCTGGGCCCGAACCCCCGATGGCGTTCGGCGGACTCGCCCTCGCGCTC
GCGCTCCTCGTCGTATCAGTGAACTTGCTCCAGGTTGCGAGCTCCGATGGCGACCACGCG
CGCTGCGAGGGGGTCGTCAAGGGCTGGGCGGCCTCGGTTGCGGGGAGCGAGGGCAAGGAT
GGGGACAAGCTGAGCCTCAGGGATCTGCTCTTCTTCCTTCACATTCCTAGAACCGGTGGC
CGTACCTACTTCCACTGCTTCCTGAAAAAGCTGTATACCAATGCTGAGGAGTGTCCGCGA
TCCTACGATAAGCTGCGGTTCGACCCCAGCCATCCTGATTGTAAGCTGGTTGTTAGTCAT
GATGACTATAGCTTCATGTCCAAGCTGCCAAGTGAGAGGACTTCTGTTGTCACAATACTA
AGGAACCCAGTTGACCGAGTATTCAGCACATATGAGTTCTCGGTCGAAGTTGCAGCCAGA
TTTCTTGTGCATCCAAACTTAACATCTGCAAAGTTAATGACTAGCCGTGTGTTAACAAAA
TCTCGTGCTGTAAGTACATTGGATATATGGCCTTGGAAATACTTGGTCCCGTGGATGAGA
GAAGATCTGTTTGCCAGGGTATGTTTACTTATTTCAGCCAAACCTTTTGCTTAGTATCAT
CCTTTTCCACTAGTAGGAAAACAACTAGGACAAACTATCAAGCCTGCATTTCTAGATATT
GAACCTTTCTATGCCAATGTATTCATCCAATATCAGGTTCTAGAAGGCGCACCTTAAATC
TAGTCTTCACCAAAAGCAATCAAACAAACACACATTGCAGCAAAGATAAAGTAGTTGATC
CATTCTAACAGTAAATTGAACATCTGCTGCATGGAGCAGACTATAATCAAGCCTCTATTT
AATTGAACCTTTATATGCCAATGTATTTATCCAACATCATGATCCACAGGTGCATCTTAA
ATCTAGTCTTGATTAGAAGCAATCAAACAAAAACACATTGCAATAATCTAGTCAATTGAA
CCTTTGCTACATGGAGCGGAGACTATATACTTGAACCTTGGAAGCCATCTAGGACATGCC
AGTTTCCCAAGAATCAATTTTATTTAACTCCAAGTATCTAAGATAATGCTTATGCTCCAG
TGTTTGAATAATAATAATTTAAGGTTTTGTCAGCAGGAAGGTTTTGACTTTCAGGTGGGA
TCTCTTAAGCTTTTGTAACACCTGAACATCGGTTTTAGTGTCATTGTCCCGCTATTAGTT
TACACTTAAGTTGATGTGAGTGATCAGGAAAATAGAGTTCAGAAATTTTTGGAATCAACA
CACATATAATTACCATTATTATGATGATGATGTTTTCATTGCCTGATGCCTATACTAAAC
CATTTTTGCAATAATATAAAAGCATACTGTTAATTTGGCAGAGAGATGCTAGGGGGATTG
ATAAAGTGAGAAGTAGCCACAGGGTTAATGCATATGATGTGGAGGATATGGTTATGCCAC
TACACCAGTACATTAATGATCCTGTTGCGCATGAAATCATTCATAATGGAGCTACCTTTC
AGATTACTGGGCTAACAAACAATTCTTACCTCAGTGGAGCACATGAGGTTCGGCACTGTG
TCAGAAAGCACCCTGATCTTGGTCATTTTGTGCTTCAAGTTGCTAAGGTATATACTGAAG
AGATGGATGTTGAGAAAAAATGTAGATGTGTGCATTTAATTAGTCAAAGCTCATGAACCA
CTATTGAACTATTGGATATCCAAAGCATCACTGCATAATAACTAATTGCCATTATTATCC
ATAGTAGATGGGTACATTATTGTATTAACCATGTCATATCTATTTACTAATCCAAGTTAG
ATTTCATACTTCCTACCAAAATGAATGCCATTATTTCAAACACAGAGCAGGCTGGACCGT
ATGCTATATGTAGGACTTACAGAAGAACATGAAGAATCTGCGAGGTTGTTTGCTCATATG
GTAGGAGCACAGGTGCTTTCACAATCTGGAGCACTGAACTTAGATATCAAGGACAATCAG
CCCACTGGAAATGACTCTCACTCATCCACGCTGGACCCAGAGGACGAAGAAACAAATGAA
CATCTGAATAGCACACATGGTTCGCAAAATAACCGAGCTCTGAACGCTGCAGACACTGTC
AAGGACGATCATGGAAAAGGAAATTTGACTGTTGGTAAGTTGATGGAAGCTTACGAGGGT
TGCATTTCAAAACTGCGAAAATCTCAATCTAATCGTCGTAAAATCTCTCTCAGAAAGGTG
GAAGGAGCAAACTTTTCGAAGGAGGCACGATGGCAGGTACCAGAGGCGGTTTTGGAGCAA
ATCATCTCACTAAACAGCCTTGACATGGAACTATATGAGCATGCTAAGAAGATATTTACA
CAAGAACATCTTATGCTAAAAATTCAGCAGTCCACGGTCATACAACACAAGCAATTGACA
GATCAGAAGGGCTGGATAGAAATGGTCTGCAGTTCCTGGAGTTGCTCTCCTTGGAAGGTT
GTACTATTTGGTCTTGGGGTCACAATAACCATCGCACTTATCATACTTGCTTTAACAACG
AGAAGAAGAACGTTTAAACTTAAGGTCTGATACTCTGATGAAGATCAGGAAGTAGCCTCC
CGATTTTGATGTACAGCTTGATACTGCCCAGAGATTAACCTTCGCTATTCCCTCGGGCAA
AGATGTTAGCATGCACAGAATCATCACATATACTCCCAACCATGTTAAACCTGGCTCATT
GGTAGGGTGGTGGCTTTTACCCGATGTGATCAGTCAATCGACAAATTTTAGGCACTTGTC
TATTCGTATGTACATTTGCCTTCTTGACCTTAGGTTGAATTCTCTCAAGGTGTTGGTAGT
TGACAAATTGCCTCAGATGAGCAATGAAACAATTGACTGTTTTGCTAGAAAAAGAGAGAA
ATACAAGATGTCAAAAAAAAAAA

consensusID : consensus_6218#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 436
fasta sequence 
                              [ACAAATTTTAGGCACTTGTCTATTCGTATGTACATTTGCCTTCTTGACCTTAGGTTGAATTCTCTCAAGGTGTTGGTAGTTGACAAATTGCCTCAGATGAGCAATGAAACAATTGACTGTTTTGCTAGAAAAAGAGAGAAATCCAAGATGTCCCTATGTCAGTNTCAACTAACAGGCATGCCCAGATGAGGTGAGCNCGACNCAAAGATGTCAGTCTTTAACTNTTAACAGGCAGTNTCAACTTAGAAACGCTGCAGGAGATAACGGGAATGTATAAATATTTTCTCTATACTGCTATTTGCATCGGATGTACTGTAAGCCAAACAAGATTTTTTACTTTACAGTGCCCCACCCTTATACTCCCTCCGTTTTTAAAACGAACGACGATGTTGATTTTTGGATATAATGTTTGGTTTCATCAAAAAAAAAAAAAAAA]

[+] EMBL AU173909             [ACAAATTTTAGGCACTTGTCTATTCGTATGTACATTTGCCTTCTTGACCTTAGGTTGAATTCTCTCAAGGTGTTGGTAGTTGACAAATTGCCTCAGATGAGCAATGAAACAATTGACTGTTTTGCTAGAAAAAGAGAGAAATCCAAGATGTCCCTATGTCAGTNTCAACTAACAGGCATGCCCAGATGAGGTGAGCNCGACNCAAAGATGTCAGTCTTTAACTNTTAACAGGCAGTNTCAACTTAGAAACGCTGCAGGAGATAACGGGAATGTATAAATATTTTCTCTATACTGCTATTTGCATCGGATGTACTGTAAGCCAAACAAGATTTTTTACTTTACAGTGCCCCACCCTTATACTCCCTCCGTTTTTAAAACGAACGACGATGTTGATTTTTGGATATAATGTTTGGTTTCATCAAAAAAAAAAAAAAAA]




>consensus_6218#1
ACAAATTTTAGGCACTTGTCTATTCGTATGTACATTTGCCTTCTTGACCTTAGGTTGAAT
TCTCTCAAGGTGTTGGTAGTTGACAAATTGCCTCAGATGAGCAATGAAACAATTGACTGT
TTTGCTAGAAAAAGAGAGAAATCCAAGATGTCCCTATGTCAGTNTCAACTAACAGGCATG
CCCAGATGAGGTGAGCNCGACNCAAAGATGTCAGTCTTTAACTNTTAACAGGCAGTNTCA
ACTTAGAAACGCTGCAGGAGATAACGGGAATGTATAAATATTTTCTCTATACTGCTATTT
GCATCGGATGTACTGTAAGCCAAACAAGATTTTTTACTTTACAGTGCCCCACCCTTATAC
TCCCTCCGTTTTTAAAACGAACGACGATGTTGATTTTTGGATATAATGTTTGGTTTCATC
AAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6218#0      CCTCTGCCTCGGCACGCGGAGAGGTGGAGAAGGCGAACGAGAGAGAGACACCGCCAGTAG 60
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CAGCAACAGCAGACACTGCGCGAGAAAGCGAGCGCCAAAGCACAATAAACTAGGGAACGC 120
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GCCGCCACGCCACGCCACGCCCACCACCCCGCGCCCGCGCCCGCCGAGACACCGCCGCGC 180
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CGCGCCGTGTGCCACGCCACGCCGCGCCGCGCTCAATTCCCCACCGCCACCGCCACCGCC 240
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GCCGCCGCCCTCCCCCTCTTCTCCCTTCCGGGTTTTTGCCTTTTTACCGCCCCGCTCTGC 300
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CCCCCCCTTCCCCACGCCGCGCCGCCCTCCTCCTCCTCCGCCTCGAACCGGGGCCGCGGC 360
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ACCCCGGCTGGATCTGGGCCCGAACCCCCGATGGCGTTCGGCGGACTCGCCCTCGCGCTC 420
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GCGCTCCTCGTCGTATCAGTGAACTTGCTCCAGGTTGCGAGCTCCGATGGCGACCACGCG 480
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CGCTGCGAGGGGGTCGTCAAGGGCTGGGCGGCCTCGGTTGCGGGGAGCGAGGGCAAGGAT 540
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GGGGACAAGCTGAGCCTCAGGGATCTGCTCTTCTTCCTTCACATTCCTAGAACCGGTGGC 600
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CGTACCTACTTCCACTGCTTCCTGAAAAAGCTGTATACCAATGCTGAGGAGTGTCCGCGA 660
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      TCCTACGATAAGCTGCGGTTCGACCCCAGCCATCCTGATTGTAAGCTGGTTGTTAGTCAT 720
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GATGACTATAGCTTCATGTCCAAGCTGCCAAGTGAGAGGACTTCTGTTGTCACAATACTA 780
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      AGGAACCCAGTTGACCGAGTATTCAGCACATATGAGTTCTCGGTCGAAGTTGCAGCCAGA 840
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      TTTCTTGTGCATCCAAACTTAACATCTGCAAAGTTAATGACTAGCCGTGTGTTAACAAAA 900
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      TCTCGTGCTGTAAGTACATTGGATATATGGCCTTGGAAATACTTGGTCCCGTGGATGAGA 960
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GAAGATCTGTTTGCCAGGGTATGTTTACTTATTTCAGCCAAACCTTTTGCTTAGTATCAT 1020
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CCTTTTCCACTAGTAGGAAAACAACTAGGACAAACTATCAAGCCTGCATTTCTAGATATT 1080
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GAACCTTTCTATGCCAATGTATTCATCCAATATCAGGTTCTAGAAGGCGCACCTTAAATC 1140
consensus_6218#1      -------------------------ACAAATTTTAGGCACTTGTCTATTCGTATGTACAT 35
                                                * *** * ***  ** *      *   *  *   

consensus_6218#0      TAGTCTTCACCAAAAGCAATCAAACAAACACACATTGCAGCAAAGATAAAGTAGTTGATC 1200
consensus_6218#1      TTGCCTTCTTGACCTTAGGTTGAAT--TCTCTCAAGGTGTTGGTAGTTGACAAATTGCCT 93
                      * * ****   *       *  **    * * **  *         *  *  * ***   

consensus_6218#0      CATTCTAACAGTAAATTGAACATCTGCT--GCATGGAGCAGACTATAATCAAGCCTCTAT 1258
consensus_6218#1      CAGATGAGCAATGAAACAATTGACTGTTTTGCTAGAAAAAGAGAGAAATCCAAGATGTCC 153
                      **    * ** * **   *    *** *  **  * *  ***    **** *   * *  

consensus_6218#0      TTAATTGAACCTTTATATGCCAATGTATTTATCCAACAT---CATGATCCACAGGTG-CA 1314
consensus_6218#1      CTATGTCAGTNTCAACTAACAGGCATGCCCAGATGAGGTGAGCNCGACNCAAAGATGTCA 213
                       **  * *   *  *    *     *    *    *  *   *  **  ** ** ** **

consensus_6218#0      TCTTAAATCTAGTCTTGATTAGAAGCAATCAAACAAAAACACATTGCAATAATCTAGTCA 1374
consensus_6218#1      GTCTTTAACTNTTAACAGGCAGTNTCAACTTAGAAACGCTGCAG-GAGATAACGGGAATG 272
                         *  * **  *       **   ***   *  **     **  *  ****        

consensus_6218#0      ATTGAACCTTTGCTACATGGAGCGGAGACTATATACTTGA-ACCTTGGAAGCCATCTAGG 1433
consensus_6218#1      TATAAATATTTTCTCTATACTGCTA----TTTGCATCGGATGTACTGTAAGCCAAACAAG 328
                        * **  *** **  **   **      * *  *   **     ** ******   * *

consensus_6218#0      ACATGCCAGTTTCCCAAGAATCAATTTTATTTAACTCCAAGTATCTAAGATAATGCTTAT 1493
consensus_6218#1      ATTTTTTACTTTACAGTGCCCCACCCTTATACTCCCTCCGTTTTTAAAACGAACGACGAT 388
                      *  *   * *** *   *   **   ****    *  *   * *  **   ** *   **

consensus_6218#0      GCTCCAGTGTTTGAATAATAATAATTTAAGGTTTTGTCAGCAGGAAGGTTTTGACTTTCA 1553
consensus_6218#1      GTT--GATTTTTGGATA----TAATGTTTGGTTTCATCAAAAAAAAAAAAAAAA------ 436
                      * *    * **** ***    **** *  *****  ***  *  **       *      

consensus_6218#0      GGTGGGATCTCTTAAGCTTTTGTAACACCTGAACATCGGTTTTAGTGTCATTGTCCCGCT 1613
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ATTAGTTTACACTTAAGTTGATGTGAGTGATCAGGAAAATAGAGTTCAGAAATTTTTGGA 1673
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ATCAACACACATATAATTACCATTATTATGATGATGATGTTTTCATTGCCTGATGCCTAT 1733
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ACTAAACCATTTTTGCAATAATATAAAAGCATACTGTTAATTTGGCAGAGAGATGCTAGG 1793
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GGGATTGATAAAGTGAGAAGTAGCCACAGGGTTAATGCATATGATGTGGAGGATATGGTT 1853
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ATGCCACTACACCAGTACATTAATGATCCTGTTGCGCATGAAATCATTCATAATGGAGCT 1913
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ACCTTTCAGATTACTGGGCTAACAAACAATTCTTACCTCAGTGGAGCACATGAGGTTCGG 1973
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CACTGTGTCAGAAAGCACCCTGATCTTGGTCATTTTGTGCTTCAAGTTGCTAAGGTATAT 2033
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ACTGAAGAGATGGATGTTGAGAAAAAATGTAGATGTGTGCATTTAATTAGTCAAAGCTCA 2093
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      TGAACCACTATTGAACTATTGGATATCCAAAGCATCACTGCATAATAACTAATTGCCATT 2153
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ATTATCCATAGTAGATGGGTACATTATTGTATTAACCATGTCATATCTATTTACTAATCC 2213
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      AAGTTAGATTTCATACTTCCTACCAAAATGAATGCCATTATTTCAAACACAGAGCAGGCT 2273
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GGACCGTATGCTATATGTAGGACTTACAGAAGAACATGAAGAATCTGCGAGGTTGTTTGC 2333
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      TCATATGGTAGGAGCACAGGTGCTTTCACAATCTGGAGCACTGAACTTAGATATCAAGGA 2393
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CAATCAGCCCACTGGAAATGACTCTCACTCATCCACGCTGGACCCAGAGGACGAAGAAAC 2453
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      AAATGAACATCTGAATAGCACACATGGTTCGCAAAATAACCGAGCTCTGAACGCTGCAGA 2513
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CACTGTCAAGGACGATCATGGAAAAGGAAATTTGACTGTTGGTAAGTTGATGGAAGCTTA 2573
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CGAGGGTTGCATTTCAAAACTGCGAAAATCTCAATCTAATCGTCGTAAAATCTCTCTCAG 2633
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      AAAGGTGGAAGGAGCAAACTTTTCGAAGGAGGCACGATGGCAGGTACCAGAGGCGGTTTT 2693
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GGAGCAAATCATCTCACTAAACAGCCTTGACATGGAACTATATGAGCATGCTAAGAAGAT 2753
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ATTTACACAAGAACATCTTATGCTAAAAATTCAGCAGTCCACGGTCATACAACACAAGCA 2813
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ATTGACAGATCAGAAGGGCTGGATAGAAATGGTCTGCAGTTCCTGGAGTTGCTCTCCTTG 2873
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GAAGGTTGTACTATTTGGTCTTGGGGTCACAATAACCATCGCACTTATCATACTTGCTTT 2933
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      AACAACGAGAAGAAGAACGTTTAAACTTAAGGTCTGATACTCTGATGAAGATCAGGAAGT 2993
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      AGCCTCCCGATTTTGATGTACAGCTTGATACTGCCCAGAGATTAACCTTCGCTATTCCCT 3053
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      CGGGCAAAGATGTTAGCATGCACAGAATCATCACATATACTCCCAACCATGTTAAACCTG 3113
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GCTCATTGGTAGGGTGGTGGCTTTTACCCGATGTGATCAGTCAATCGACAAATTTTAGGC 3173
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      ACTTGTCTATTCGTATGTACATTTGCCTTCTTGACCTTAGGTTGAATTCTCTCAAGGTGT 3233
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      TGGTAGTTGACAAATTGCCTCAGATGAGCAATGAAACAATTGACTGTTTTGCTAGAAAAA 3293
consensus_6218#1      ------------------------------------------------------------
                                                                                  

consensus_6218#0      GAGAGAAATACAAGATGTCAAAAAAAAAAA 3323
consensus_6218#1      ------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)