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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6220#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2337 fasta sequence
[ACTGCTGCACTCGCGGAGGCGACCCAGGATTGCTCGTCGTCCTCCACGGAGATGGCGGCATTGCGCGGCCTATCTCCTCCTCCTCCTCCTCATCCTGGTGATCCTCCGACCAGCGGCTGCGCCCGGCGCCGCTTCGCAGCCGCCTACCTCGGAGCCTCACCTCCCGCCGCCGCTGCTTGCTCAGAAGGTGCAGGTGTGGCCCAAGCCGACGTCCATCTCGTGGCCGTGCGCGGTGTACGCGCCGCTCTCGCCGTCGTTCAGCGTCCGCGCGGTGCTGTCCCACCCGTCGCTCCGCCAGGGGGTAGCCTTCTACACCCGCCTCATCCGCGCCGAGCGCCACGCGCCGCTGGTTCCCCCCGCCAACTACACCCTCTCCCGCGTCCCCGTCCGCACCCTCACGCTCTCCGTCTCCGACCCCGACGTCCCGCTCGGGCCCCGGCCGTCGACGAGTCCTACACGCTCTCCGTGCTCCCGGACTCCGGATCGGCCGATATCTCCGCCGGCCACGCCATGGGGCGCCATCCGCGGGCTCGAGACCTTCTCCCAGCTCGCCTGGGCCGGCGGCGGCGCCGCCTCCGGTGGCCAGCCGATCGTCCCCAGCGGCATCGAGATCTCCGACCGCCCACACTTCACCCACCGCGGCATCCTCCTCGACACCGCCAGGAATTTCTACCCGGTCCGCGACATCCTCCACACCCTCCGCGCCATGGCCTTCAACAAGCTCAATGTCTTCCACTGGCACATCACCGACGCCCAGTCCTTCCCCATCGTCCTCCCTACCGTCCCCAACCTCGCCAACTCCGGCTCCTACTCCCCCACCATGCGCTACACCGAGAACGACGTCCGGCACATCGTCAGCTTCGCCGCCTCCTTCGGCATCCGCGTCATCCCCGAGATCGACATGCCCGGGCACACGGGTTCGTGGGCGGGAGCGTACCCGGAGATCGTCACCTGCGCGAACAGGTTCTGGGCGCCGCACGCGGAGCCGGCGCTGGCGGCGGAGCCCGGCACGGGGCAGCTGAACCCGCTCAACCCCAAGACGTACCGCGTGGCGCAGGACGTGCTGCGCGACATGGTGGCCCTGTTCCCGGACCCGTACCTCCACGGCGGCGCCGACGAGGTGAACACGGCGTGCTGGGAGGACGACCCGGTGGTGCGCCGGTTCCTCGCCGAGGGCGGCACGCACGACCACCTCCTGGAGCTGTTCATCAACGCGACGCGCCCGTTCGTGGCGCAGGAGCTGAACCGCACGGTGGTCTACTGGGAGGACGTCCTCCTCGGGCCCAAGGTCACCGTCGGCCCCACGATTCTGCCCAGGGAGACCACCATACTGCAGACGTGGAACGACGGGCCGGAGAACACGAAGCGCGTCGTCGCCGCGGGCTACCGCGCCATCGTGTCGTCGGCGTCGTACTACTACCTGGACTGCGGCCACGGCGGGTGGGTGGGCAACGACAGCCGGTACGACAAGCAGGAGAAGGAGCGCGAGGGCACGCCGCTGTTCAACGACCCCGGCGGCACGGGCGGGTCATGGTGCGCGCCGTTCAAGACGTGGCAGCGCGTCTACGACTACGACATCCTGCACGGGCTGACCGACGACGAGGCGCAGCTGGTGCTGGGCGGGGAGGTGGCGCTGTGGTCGGAGCAGTCGGACGAGACGGTGCTGGACGCCAGGCTGTGGCCGAGGGCCGCCGCCGCCGCGGAGACGCTCTGGTCCGGCAACAAGGGCTCCAACGGGAAGAAGCGCTACGCGAACGCCACCGACCGCCTCAACGACTGGAGGCACCGGATGGTCG-A-GCGCGGCATCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCTCGCTCCACCCCGGCATGTGCAACCTGTCGCAGTAGCAGTGTCAGTTTGCTCCATCGCTTCGCCTCGCTGTCGCCTGCACAGTGCGAAGGAATGTTCAGAAATCCAAGTGACAGAAGAAGAATCCGCATCGATCTTGGGGGCGTGACGTCGTACACTGATTGCTGAAGAAACCAAGAACAGAATAAACGAATGCCTACTAAACAAATGTTCTGTTCTGATGCCCTCTTCCGGAGGGAACCCGCCGATTGCGAATTGTTCAAGAAAGTCGCGGACTTATGCCGTGCAGAAAAGAAAGTTTTCTTTGTGAGTAGTTTCTGCACTTGATGCTGAACAGATTTTTGCACTGTTTATTCCTTCATTTTCACAATAACACGGGTAGATAGAGTAGTAGTAGTATTTGGCTAGTGCAATAGATGAACAAGGTTGTAGTAGAAGTGCAGAACCATCTGGTTGTAGTTTTGTACGAAGGGTATCTTAATAGAAAAAAGTTGGGAAAAAA]
[+] EMBL AK121985 [ACTGCTGCACTCGCGGAGGCGACCCAGGATTGCTCGTCGTCCTCCACGGAGATGGCGGCATTGCGCGGCCTATCTCCTCCTCCTCCTCCTCATCCTGGTGATCCTCCGACCAGCGGCTGCGCCCGGCGCCGCTTCGCAGCCGCCTACCTCGGAGCCTCACCTCCCGCCGCCGCTGCTTGCTCAGAAGGTGCAGGTGTGGCCCAAGCCGACGTCCATCTCGTGGCCGTGCGCGGTGTACGCGCCGCTCTCGCCGTCGTTCAGCGTCCGCGCGGTGCTGTCCCACCCGTCGCTCCGCCAGGGGGTAGCCTTCTACACCCGCCTCATCCGCGCCGAGCGCCACGCGCCGCTGGTTCCCCCCGCCAACTACACCCTCTCCCGCGTCCCCGTCCGCACCCTCACGCTCTCCGTCTCCGACCCCGACGTCCCGCTCGGGCCCCGGCCGTCGACGAGTCCTACACGCTCTCCGTGCTCCCGGACTCCGGATCGGCCGATATCTCCGCCGGCCACGCCATGGGGCGCCATCCGCGGGCTCGAGACCTTCTCCCAGCTCGCCTGGGCCGGCGGCGGCGCCGCCTCCGGTGGCCAGCCGATCGTCCCCAGCGGCATCGAGATCTCCGACCGCCCACACTTCACCCACCGCGGCATCCTCCTCGACACCGCCAGGAATTTCTACCCGGTCCGCGACATCCTCCACACCCTCCGCGCCATGGCCTTCAACAAGCTCAATGTCTTCCACTGGCACATCACCGACGCCCAGTCCTTCCCCATCGTCCTCCCTACCGTCCCCAACCTCGCCAACTCCGGCTCCTACTCCCCCACCATGCGCTACACCGAGAACGACGTCCGGCACATCGTCAGCTTCGCCGCCTCCTTCGGCATCCGCGTCATCCCCGAGATCGACATGCCCGGGCACACGGGTTCGTGGGCGGGAGCGTACCCGGAGATCGTCACCTGCGCGAACAGGTTCTGGGCGCCGCACGCGGAGCCGGCGCTGGCGGCGGAGCCCGGCACGGGGCAGCTGAACCCGCTCAACCCCAAGACGTACCGCGTGGCGCAGGACGTGCTGCGCGACATGGTGGCCCTGTTCCCGGACCCGTACCTCCACGGCGGCGCCGACGAGGTGAACACGGCGTGCTGGGAGGACGACCCGGTGGTGCGCCGGTTCCTCGCCGAGGGCGGCACGCACGACCACCTCCTGGAGCTGTTCATCAACGCGACGCGCCCGTTCGTGGCGCAGGAGCTGAACCGCACGGTGGTCTACTGGGAGGACGTCCTCCTCGGGCCCAAGGTCACCGTCGGCCCCACGATTCTGCCCAGGGAGACCACCATACTGCAGACGTGGAACGACGGGCCGGAGAACACGAAGCGCGTCGTCGCCGCGGGCTACCGCGCCATCGTGTCGTCGGCGTCGTACTACTACCTGGACTGCGGCCACGGCGGGTGGGTGGGCAACGACAGCCGGTACGACAAGCAGGAGAAGGAGCGCGAGGGCACGCCGCTGTTCAACGACCCCGGCGGCACGGGCGAGTCATGGTGCGCGCCGTTCAAGACGTGGCAGCGCGTCTACGACTACGACATCCTGCACGGGCTGACCGACGACGAGGCGCAGCTGGTGCTGGGCGGGGAGGTGGCGCTGTGGTCGGAGCAGTCGGACGAGACGGTGCTGGACGCCAGGCTGTGGCCGAGGGCCGCCGCCGCCGCGGAGACGCTCTGGTCCGGCAACAAGGGCTCCAACGGGAAGAAGCGCTACGCGAACGCCACCGACCGCCTCAACGACTGGAGGCACCGGATGGTCG AGGCGCGGCATCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCTCGCTCCACCCCGGCATGTGCAACCTGTCGCAGTAGCAGTGTCAGTTTGCTCCATCGCTTCGCCTCGCTGTCGCCTGCACAGTGCGAAGGAATGTTCAGAAATCCAAGTGACAGAAGAAGAATCCGCATCGATCTTGGGGGCGTGACGTCGTACACTGATTGCTGAAGAAACCAAGAACAGAATAAACGAATGCCTACTAAACAAATGTTCTGTTCTGATGCCCTCTTCCGGAGGGAACCCGCCGATTGCGAATTGTTCAAGAAAGTCGCGGACTTATGCCGTGCAGAAAAGAAAGTTTT ]
[+] EMBL AK100702 [ ACTCGCGGAGGCGA CCAGGATTGCTCGTCGTCCTCCACGGAGATGGCGGCATTGC CGGCCTATCTCCTCCTCCTCCTCCTCATCCTGGTGATCCTCCGACCAGCGGCTGCGCCCGGCGCCGCTTCGCAGCCGCCTACCTCGGAGCCTCACCTCCCGCCGCCGCTGCTTGCTCAGAAGGTGCAGGTGTGGCCCAAGCCGACGTCCATCTCGTGGCCGTCCGCGGTGTACGCGCCGCTCTCGCCGTCGTTCAGCGTCCGCGCGGTGCTGTCCCACCCGTCGCTCCGCCAGGCGGTAGCCTTCTACACCCGCCTCATCCGCGCCGAGCGCCACGCGCCGCTGGTTCCCCCCGCCAACTACACCCTCTCCCGCGTCCCCGTCCGCACCCTCACGCTCTCCGTCTCCGACCCCGACGTCCCGCTC GGCCCC GCCGTCGACGAGTCCTACACGCTCTCCGTGCTCCCGGACTCCGGATCGGCCGATATCTCCGCC GCCACGCCATGGGGCGCCATCCGCGGGCTCGAGACCTTCTCCCAGCTCGCCTGGGCCGGCGGCGGCGCCGCCTCCGGTGGCCAGCCGATCGTCCCCAGCGGCATCGAGATCTCCGACCGCCCACACTTCACCCACCGCGGCATCCTCCTCGATACCGCCAGGAATTTCTACCCGGTCCGCGACATCCTCCACACCCTCCGCGCCATGGCCTTCAACAAGCTCAATGTCTTCCACTGGCACATCACCGACGCCCAGTCCTTCCCCATCGTCCTCCCTACCGTCCCGAACCTCGCCAACTCCGGCTCCTACTCCCCCACCATGCGCTACACCGAGAACGACGTCCGGCACATCGTCAGCTTCGCCGCCTCCTTCGGCATCCGCGTCATCCCCGAGATCGACATGCCCGGGCACACGGGTTCGTGGGCGGGAGCGTACCCGGAGATCGTCACCTGCGCGAACAGGTTCTGGGCGCCGCACGCGGAGCCGGCGCTGGCGGCGGAGCCCGGCACGGGGCAGCTGAACCCGCTCAACCCCAAGACGTACCGCGTGGCGCAGGACGTGCTGCGCGACATGGTGGCCCTGTTCCCGGACCCGTACCTCCACGGCGGCGCCGACGAGGTGAACACGGCGTGCTGGGAGGACGACCCGGTGGTGCGCCGGTTCCTCGCCGAGGGCGGCACGCACGACCACCTCCTGGAGCTGTTCATCAACGCGACGCGCCCGTTCGTGGCGCAGGAGCTGAACCGCACGGTGGTCTACTGGGAGGACGTCCTCCTCGGGCCCAAGGTCACCGTCGGCCCCACGATTCTGCCCAGGGAGACCACCATACTGCAGACGTGGAACGACGGGCCGGAGAACACGAAGCGCGTCGTCGCCGCGGGCTACCGCGCCATCGTGTCGTCGGCGTCGTACTACTACCTGGACTGCGGCCACGGCGGGTGGGTGGGCAACGACAGCCGGTACGACAAGCAGGAGAAGGAGCGCGAGGGCACGCCGCTGTTCAACGACCCCGGCGGCACGGGCGGGTCATGGTGCGCGCCGTTCAAGACGTGGCAGCGCGTCTACGACTACGACATCCTGCACGGGCTGACCGACGACGAGGCGCAGCTGGTGCTGGGCGGGGAGGTGGCGCTGTGGTCGGAGCAGTCGGACGAGACGGTGCTGGACGCCAGGCTGTGGCCGAGGGCCGCCGCCGCCGCGGAGACGCTCTGGTCCGGCAACAAGGGCTCCAACGGGAAGAAGCGCTACGCGAACGCCACCGACCGCCTCAACGACTGGAGGCACCGGATGGTCG A GCGCGGCATCCGCGCCGAGCCCATCCAGCCGCTCTGGTGCTCGCTCCACCCCGGCATGTGCAACCTGTCGCAGTAGCAGTGTCAGTTTGCTCCATCGCTTCGCCTCGCTGTCGCCTGCACAGTGCGAAGGAATGTTCAGAAATCCAAGTGACAGAAGAAGAATCCGCATCGATCTTGGGGGCGTGACGTCGTACACTGATTGCTGAAGAAACCAAGAACAGAATAAACGAATGCCTACTAAACAAATGTTCTGTTCTGATGCCCTCTTCCGGAGGGAACCCGCCGATTGCGAATTGTTCAAGAAAGTCGCGGACTTATGCCGTGCAGAAAAGAAAGTTTTCTTTGTGAGTAGTTTCTGCACTTGATGCTGAACAGATTTTTGCACTGTTTATTCCTTCATTTTCACAATAACACGGGTAGATAGAGTAGTAGTAGTATTTGGCTAGTGCAATAGATGAACAAGGTTGTAGTAGAAGTGCAGAACCATCTGGTTGTAGTTTTGTACGAAGGGTATCTTAATAGAA ]
[+] EMBL C71975 [ CCGCGGGCTAC CNCNATCNTNTCGTCGGCGTCGTACTACTACCTGGACTGCGGCCACGGCGGGTGGGTGGGCAACGACAGCNGGTACGACAAGCAGGAGAAGGAGCGCGAGGGCACGCCGCTGTTCAACGACCCCGGCGGCACGGGCGGGTNATGGTGCGCGCCGTTCAANACGTGGCAGCGCGTCTACNACTACNACATNCTGCACGGGCTGACCGACGACGAGGCGCANTGGGTGCTGGGCGGGGAGGTGGCGCTGTGGTCGGAGCAGTCGGACGAGACGGTGCTGGACGCCAGGCTGTGGCCGAGGGCCGCCGCCGCCGCGGAGACGCTCTTGTCCGGCAACAAGGGCTCCAACGGGAAGAAGCGCTA ]
[+] EMBL AU101072 [ AGGCACCGGATGGTCGNA GCGCGGNATCCGCGCAGAGCCCATCCAGCCGCTCTGGTGCTCGCTCCACCCCGGCATGTGCAACCTGTCGCAGTAGCAGTGTCAGTTTGCTCCATCG TTCGCCTCGCTGTCGCCTGCACAGTGCGAAGGAATGTTCAGAAATCCAAGTGACAGAAGAAGAATCCGCATCGATCTTGGGGGCGTGACGTCGTACACTGATTGCTGAAGAAACCAAGAACAGAATAAACGAATGCCTACTAAACAAATGTTCTGTTCTGATGCCCTCTTCCGGAGGGAACCCGCCGATTGCGAATTGTTCAAGAAAGTCGCGGACTTATGCCGTGCAGAAAAGAAAGTTTTCTTTGTGAGTAGTTTCTGCACTTGATGCTGAACAGATTTTTGCACTGTTTATTCCTTCATTTTCACAATAACACGGGTAGATAGAGTAGTAGTAGTATTTGGCTAGTGCAATAGATGAACAAGGTTGTAGTAGAAGTGCAGAACCATCTGGTTGTAGTTTTGTACGAAGGGTATCTTAATAGAAAAAAGTTGGGAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||