cluster # 6221

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Oryza sativa
cluster # 6221 cluster # 6221 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6221#0 length = 1823 sequences # 4
consensusID : consensus_6221#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1823
fasta sequence
                              [AAGTAGTACCAAGTACCAACTACCAAGTTCCAATATTAATTCGATTCTTATGTTGAGGCGCGGCCAAACTGCCGCGGGATCATCCTTCTCCCACCGGAGACTCCCGAGATGAGGCGAGGGGAATCGAAGGCGGCGACGAGGGGCGCAAATCGATCGTCGTCGTCGTCGTCGTGGAAGAGCAGATATATTGGATATGGCTTAGTTCTTGGCTTCGTGTTGATGCTGCTCTACTTGATGGTCAATGCGCAGTTCAGCAACAGCCCAAATGCTTATTTAGGCCCAGCAACAACTAGTAAAACTGAATCGATTCCTGCTACAACATATCAAGGGAATCAAGCATGGC---AAGATGGGAGCAGAGGACTGGAGGAAGGCCACAGGGAGGAGGTAGCTAG----CACAC--AACGATCAACAGGCCAACGTCAAGAGAAAGATGACGAAAGCGAGAAGCAACGAACAGAGAAAAATTCAATCGAGGAACAATTAGGCAACGACAGGAGCTCTAACTACTGGGAGGAAGGACGCCAATCCGAGAAGAAGGATACGATAGAATTCAGTGAATTCGGAGGAGGAACGGACGACTTCAACAATGTTGCCAACACCAAGCCGATCTGCGACACGTCGTTCGGCAAGTACGACATCTGCGTGCTCGACGGCGACACGCGAGCGCAGGGAGGCGGCGGCGCCGGCGCCGCCGTGGTCACCCTGGTCTCGCCGCGCGCGGCGCCGCGGGAGTGGAAGATAAAGCCCTACTCCCGGAAGTACCTCGACGGCCTCAAACCCGTCACGGTGAGGTCCGTCCCCAACCCGGAGGACGCCCCGCCGTGCACGACGCGGCTGAACGTCCCGGCGATGGTGATCGAGCTCGGCGGGCTCACCGGCAACTACTGGCACGACTTCACCGACGTGCTCGTCCCGCTCTTCATCGGCGCGCGTCGCTTCGGCGGCGAGGTCCAGCTCCTC-GTC-GTCAACCT-GCTGCCCTTCTGGGTG-GACAAGTACCGGAGGATCTTCAGCCAGATCTCGCGGCACGACATCGTCGACCTG-GAGAAGGACGACGACCGCGGCGTCGTCCGCTGTTACCCGCACGTGGTGGTCGGCTATGGCAG-CCGCAAGGAGTTCACCATCGACCCCTCCCTCGAC-GACACCGGCGGC-GGCTACACCATGGTCAACTTCACCGAGTTCTTGAGGCAATC-CTACTCGCTCCCGCGTGACCGGCCGATCAAGCTCGGTACCAACCACGGTGCACGGCCGCGGATGATGATCCTGGAGCGGACCAACAGCCGGAAGCTGATGAACCTCCCGGAGGTCGCCGCGGCCGCGCGAGCGGCGGGGTTCGAGGTGACCGTCGCCGGCGGCCGTCCGACGAGCACCTACGACGAGTTCGCCCGGGAGGTGAACTCGTACGACGTGATGGTGGGCGTGCACGGCGCCGGGCTGACCAACTGCGTGTTCCTCCCCACGGGGGCCGTGCTGCTGCAGATCGTGCCGTACGGCCGGCTCGAGAGCATCGCGCAGACGGACTTCGGCGAGCCGGCGCGAGACATGGGGCTCCGGTACATCGAGTACGACATCGCCGCCGACGAGAGCTCGCTGATGGACGTGTTCGGCAAGGACCACCCCATGATCAAGGACCCCGTCGCCGTGCACTTGAGCGGGTGGGGAAACGTGGCCGAGTGGTACCTCGGGAAGCAGGACGTGCGGGTCAACATTGAGCGGTTTAGGCCGTTTCTGACGCAGGCGTTGGAGCACCTGCAGTAGCGATCCTTTTTCTCGATGAACAAGCAAAAATGTATATGCATAACACGACGGTGCGTTTTCCTATTCTTATT]

[-] EMBL BI306711             [AAGTAGTACCAAGTACCAACTACCAAGTTCCAATATTAATTCGATTCTTATGTTGAGGCGCGGCCAAACTGCCGCGGGATCATCCTTCTCCCACCGGAGACTCCCGAGATGAGGCGAGGGGAATCGAAGGCGGCGACGAGGGGCGCAAATCGATCGTCGTCGTCGTCGTCGTGGAAGAGCAGATATATTGGATATGGCTTAGTTCTTGGCTTCGTGTTGATGCTGCTCTACTTGATGGTCAATGCGCAGTTCAGCAACAGCCCAAATGCTTATTTAGGCCCAGCAACAACTAGTAAAACTGAATCGATTCCTGCTACAACATATCAAGGGAATCAAGCATGGC   AAGATGGGAGCAGAGGACTGGAGGAAGGCCACAGGGAGGAGGTAGCTAG    CACAC  AACGATCAACAGGCCAACGTCAAGAGAAAGATGACGAAAGCGAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK121999             [                                                                                   CCTTCTGCCACCGGAGACTCCCGAGATGAGGCGAGGGGAATCGAAGGCGGCGACGAGGGGCGCAAATCGATCGTCGTCGTCGTCGTCGTGGAAGAGCAGATATATTGGATATGGCTTAGTTCTTGGCTTCGTGTTGGTGCTGCTCTACTTGATGGTCAATGCGCAGTTCAGCAACAGCCCAAATGCTTATTTAGGCCCAGCAACAACTAGTAAAACTGAATCGATTCCTGCTACAACATATCAAGGGAATCAAGCATGGCAAGAAGATGGGAGCAGAGGACTGGAGGAAGGCCACAGGGAGGAGGTAGCTAGTACACACACGGAACGATCAACAGGCCAACGTCAAGAGAAAGATGACGAAAGCGAGAAGCAACGAACAGAGAAAAATTCAATCGAGGAACAATTAGGCAACGACAGGAGCTCTAACTACTGGGAGGAAGGACGCCAATCCGAGAAGAAGGATACGATAGAATTCAGTGAATTCGGAGGAGGAACGGACGACTTCAACAATGTTGCCAACACCAAGCCGATCTGCGACACGTCGTTCGGCAAGTACGACATCTGCGTGCTCGACGGCGACACGCGAGCGCAGGGAGGCGGCGGCGCCGGCGCCGCCGTGGTCACCCTGGTCTCGCCGCGCGCGGCGCCGCGGGAGTGGAAGATAAAGCCCTACTCCCGGAAGTACCTCGACGGCCTCAAACCCGTCACGGTGAGGTCCGTCCCCAACCCGGAGGACGCCCCGCCGTGCACGACGCGGCTGAACGTCCCGGCGATGGTGATCGAGCTCGGCGGGCTCACCGGCAACTACTGGCACGACTTCACCGACGTGCTCGTCCCGCTCTTCATCGGCGCGCGTCGCTTCGGCGGCGAGGTCCAGCTCCTC GTC GTCAACCT GCTGCCCTTCTGGGTG GACAAGTACCGGAGGATCTTCAGCCAGATCTCGCGGCACGACATCGTCGACCTG GAGAAGGACGACGACCGCGGCGTCGTCCGCTGTTACCCGCACGTGGTGGTCGGCTATGGCAG CCGCAAGGAGTTCACCATCGACCCCTCCCTCGAC GACACCGGCGGC GGCTACACCATGGTCAACTTCACCGAGTTCTTGAGGCAATC CTACTCGCTCCCGCGTGACCGGCCGATCAAGCTCGGTACCAACCACGGTGCACGGCCGCGGATGATGATCCTGGAGCGGACCAACAGCCGGAAGCTGATGAACCTCCCGGAGGTCGCCGCGGCCGCGCGAGCGGCGGGGTTCGAGGTGACCGTCGCCGGCGGCCGTCCGACGAGCACCTACGACGAGTTCGCCCGGGAGGTGAACTCGTACGACGTGATGGTGGGCGTGCACGGCGCCGGGCTGACCAACTGCGTGTTCCTCCCCACGGGGGCCGTGCTGCTGCAGATCGTGCCGTACGGCCGGCTCGAGAGCATCGCGCAGACGGACTTCGGCGAGCCGGCGCGAGACATGGGGCTCCGGTACATCGAGTACGACATCGCCGCCGACGAGAGCTCGCTGATGGACGTGTTCGGCAAGGACCACCCCATGATCAAGGACCCCGTCGCCGTGCACTTGAGCGGGTGGGGAAACGTGGCCGAGTGGTACCTCGGGAAGCAGGACGTGCGGGTCAACATTGAGCGGTTTAGGCCGTTTCTGACGCAGGCGTTGGAGCACCTGCAGTAGCGATCCTTTTTCTCGATGAACAAGCAAAAATGTATATGCATAACACGACGGTGCGTTTTCCTATTCTTATT]
[-] EMBL BI810891             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCCGCTCTTCATCGGCGCGCATCACTTC GCGGCGAGGTCCAGCTCCTCAGTCAGTCAACCTGGCTGCCCTTCTGGGTGTGACAAGTACCGGAGGATCTTCAGCCAGATCTCGCGGCACAACATCGTCGACCTGTGAGAAGGACGACGACCGCGGCGTCGTCCGCTGTTACCCGCACGTGGTGGTCGGCTATGGCAGTCCGCAAGGAGTTCACCATCGACCCCTCCCTCGACAGACACCGGCGGCAGGCTACACCATGGTCAACTTCACCGAGTTCTTGAGGCAATCACTACTCGCTCCCGCGTGACCGGCCGATCAAGCTCGGTACCAACCACGGTGCACGGCCGCGGATGATGATCCTGGAGCGGACCAACAGCCGGAAGCTGATGAACCTCCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF325635             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGGGTTCGAGGTGACCGTCGCCGGCGGCCGTCCGACGAGCACCTACGACGAGTTCGCCCGGGAGGTGAACTCGTACGACGTGATGGTGGGCGTGCACGGCGCCGGGCTGACCAACTGCGTGTTCCTCCCCACGGGGGCCGTGCTGCTGCAGATCGTGCCGTACGGCCGGCTCGATAGCATCGCGCATACGGACTTCGGCGAGCCGGCGCGAGACATGGGGCTCCGGTACATC                                                                                                                                                                                                                                                                             ]




>consensus_6221#0
AAGTAGTACCAAGTACCAACTACCAAGTTCCAATATTAATTCGATTCTTATGTTGAGGCG
CGGCCAAACTGCCGCGGGATCATCCTTCTCCCACCGGAGACTCCCGAGATGAGGCGAGGG
GAATCGAAGGCGGCGACGAGGGGCGCAAATCGATCGTCGTCGTCGTCGTCGTGGAAGAGC
AGATATATTGGATATGGCTTAGTTCTTGGCTTCGTGTTGATGCTGCTCTACTTGATGGTC
AATGCGCAGTTCAGCAACAGCCCAAATGCTTATTTAGGCCCAGCAACAACTAGTAAAACT
GAATCGATTCCTGCTACAACATATCAAGGGAATCAAGCATGGCAAGATGGGAGCAGAGGA
CTGGAGGAAGGCCACAGGGAGGAGGTAGCTAGCACACAACGATCAACAGGCCAACGTCAA
GAGAAAGATGACGAAAGCGAGAAGCAACGAACAGAGAAAAATTCAATCGAGGAACAATTA
GGCAACGACAGGAGCTCTAACTACTGGGAGGAAGGACGCCAATCCGAGAAGAAGGATACG
ATAGAATTCAGTGAATTCGGAGGAGGAACGGACGACTTCAACAATGTTGCCAACACCAAG
CCGATCTGCGACACGTCGTTCGGCAAGTACGACATCTGCGTGCTCGACGGCGACACGCGA
GCGCAGGGAGGCGGCGGCGCCGGCGCCGCCGTGGTCACCCTGGTCTCGCCGCGCGCGGCG
CCGCGGGAGTGGAAGATAAAGCCCTACTCCCGGAAGTACCTCGACGGCCTCAAACCCGTC
ACGGTGAGGTCCGTCCCCAACCCGGAGGACGCCCCGCCGTGCACGACGCGGCTGAACGTC
CCGGCGATGGTGATCGAGCTCGGCGGGCTCACCGGCAACTACTGGCACGACTTCACCGAC
GTGCTCGTCCCGCTCTTCATCGGCGCGCGTCGCTTCGGCGGCGAGGTCCAGCTCCTCGTC
GTCAACCTGCTGCCCTTCTGGGTGGACAAGTACCGGAGGATCTTCAGCCAGATCTCGCGG
CACGACATCGTCGACCTGGAGAAGGACGACGACCGCGGCGTCGTCCGCTGTTACCCGCAC
GTGGTGGTCGGCTATGGCAGCCGCAAGGAGTTCACCATCGACCCCTCCCTCGACGACACC
GGCGGCGGCTACACCATGGTCAACTTCACCGAGTTCTTGAGGCAATCCTACTCGCTCCCG
CGTGACCGGCCGATCAAGCTCGGTACCAACCACGGTGCACGGCCGCGGATGATGATCCTG
GAGCGGACCAACAGCCGGAAGCTGATGAACCTCCCGGAGGTCGCCGCGGCCGCGCGAGCG
GCGGGGTTCGAGGTGACCGTCGCCGGCGGCCGTCCGACGAGCACCTACGACGAGTTCGCC
CGGGAGGTGAACTCGTACGACGTGATGGTGGGCGTGCACGGCGCCGGGCTGACCAACTGC
GTGTTCCTCCCCACGGGGGCCGTGCTGCTGCAGATCGTGCCGTACGGCCGGCTCGAGAGC
ATCGCGCAGACGGACTTCGGCGAGCCGGCGCGAGACATGGGGCTCCGGTACATCGAGTAC
GACATCGCCGCCGACGAGAGCTCGCTGATGGACGTGTTCGGCAAGGACCACCCCATGATC
AAGGACCCCGTCGCCGTGCACTTGAGCGGGTGGGGAAACGTGGCCGAGTGGTACCTCGGG
AAGCAGGACGTGCGGGTCAACATTGAGCGGTTTAGGCCGTTTCTGACGCAGGCGTTGGAG
CACCTGCAGTAGCGATCCTTTTTCTCGATGAACAAGCAAAAATGTATATGCATAACACGA
CGGTGCGTTTTCCTATTCTTATT
clustalw multiple alignements is not computed in this case