cluster # 6246

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Oryza sativa
cluster # 6246 cluster # 6246 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6246#0 length = 964 sequences # 4
consensusID : consensus_6246#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 964
fasta sequence
                              [CGTCCTGTATCTTCCTTCATCTTCTTGCCATAGTTGGGCACTTGGGCTGGTGCGCCGCCTAGGCACCGGCGGCGGAGGCGGCGGCGCGCCACACGCGATAAGACCGAGGCAAGGCGGCGGCGTGCCGGTGCACCGCGCGCGCACCACACGCGACAAGCTCGCAAGGCGGGGAGAATGCCACAACGATTGCACGCGCCGCCCAACAGTTTGACGGATACCAGGAGCGGGAGATTGCACACCAAAGGTCAAACAGGTTGATCTAAAGATGCATAGGGACCAGCTGATTGGGTCGGCATTCATCGCATTTGGCATCATATTATTTGTGGGTTTCTTCTATGCTGCGGTTTTGACCAAGATGCTTCCACCATATGAAAACCGGTTTCTGTCAGCAATCCAAAACGATAGGTATTAC-TGCCTGCTCATACCGTTGACACTCCCAGTGATAATCGTGGCTGTCTATTTGCATTGGCTAAGCATGAAGATGTTCAAGCATGCATGAAGCCTCATTCTAAAAGTCTGAAGTTCTTTCTCAAATGACAACCTCATTATCATGGTGACCAAAAACATACTCCCTCCGTCCCAAAAAAAACTCAACCTGGACAAAGGGGATTCATGAGG-TTTTTTGGGACGGAGGGAGTATATTACTAGTATCGTTCTCAAAGTCAGCGTTAGACTTTTACAACCATTAATATATATATATTTTTCTGCCAGGAATTCAAACTATACATAATTGTACTATCGTAGAACTATTTGTCCCCAGCTCCGTCTGTTGCACTAGAAAAAAAACAGACTAATTTAGGATCAAGGCACAAA-CAAGTGTCAAA-TTTTTTTTGTCTATC-AAATTTTGCCA-CCAGAGTATAATTATTGTTTATAGTACAAAGACTTCAAATCNTGNGCNCTGGCCTTTTATGNCAANTTTTTTACCAATGGGGTCCTGGCATTGGAATTTTTTCNTTTTTTTTTT]

[+] EMBL AK109291             [CGTCCTGTATCTTCCTTCATCTTCTTGCCATAGTTGGGCACTTGGGCTGGTGCGCCGCCTAGGCACCGGCGGCGGAGGCGGCGGCGCGCCACACGCGATAAGACCGAGGCAAGGCGGCGGCGTGCCGGTGCACCGCGCGCGCACCACACGCGACAAGCTCGCAAGGCGGGGAGAATGCCACAACGATTGCACGCGCCGCCCAACAGTTTGACGGATACCAGGAGCGGGAGATTGCACACCAAAGGTCAAACAGGTTGATCTAAAGATGCATAGGGACCAGCTGATTGGGTCGGCATTCATCGCATTTGGCATCATATTATTTGTGGGTTTCTTCTATGCTGCGGTTTTGACCAAGATGCTTCCACCATATGAAAACCGGTTTCTGTCAGCAATCCAAAACGATAGGTATTAC TGCCTGCTCATACCGTTGACACTCCCAGTGATAATCGTGGCTGTCTATTTGCATTGGCTAAGCATGAAGATGTTCAAGCATGCATGAAGCCTCATTCTAAAAGTCTGAAGTTCTTTCTCAAATGACAACCTCATTATCATGGTGACCAAAAACATACTCCCTCCGTCCCAAAAAAAACTCAACCTGGACAAAGGGGATTCATGAGG TTTTTTGGGACGGAGGGAGTATATTACTAGTATCGTTCTCAAAGTCAGCGTTAGACTTTTACAACCATTAATATATATATATTTTTCTGCCAGGAATTCAAACTATACATAATTGTACTATCGTAGAACTATTTGTCCCCAGCTCCGTCTGTTGCACTAGAAAAAAAACAGACTAATTTAGGATCAAGGCACAAA CAAGTGTCAAA TTTTTTTTGTCTATC AAATTTTGCCA CCAGAGTATAATTATTGTTTATAGTA                                                                                        ]
[+] EMBL CA766123             [                                                                                                                                                                                                                                       TTGCACACCAAAGGTCAAACAGGTTGATCTAAAGATGCATAGGGACCAGCTGATTGGGTCGGCATTCATCGCATTTGGCATCATATTATTTGTGGGTTTCTTCTATGCTGCGGTTTTGACCAAGATGCTTCCACCATATGAAAACCGGTTTCTGTCAGCAATCCAAAACGATAGGTATTACTTGCCTGCTCATACCGTTGACACTCCCAGTGATAATCGTGGCTGTCTATTTGCATTGGCTAAGCATGAAGATGTTCAAGCATGCATGAAGCCTCATTCTAAAAGTCTGAAGTTCTTTCTCAAATGACAACCTCATTATCATGGTGACCAAAAACATACTCCCTCCATCCC AAAAAAACTCAACCTGGACAAAGGGGATTCATGAGGTTTTTTTGGGACGGAGGGAGTATATTACTAGTATCGTTCTCAAAGTCAGCGTTAGACTTTTACAACCATTA  ATATATATATTTTTCTGCCAGGAATTCAAACTATACATAATTGTACTATCGTAGAACTATTTGTCCCCAGCTNCGTCTGTTGCACTAGAAAAAAAACAGACTAATTTAGGATCAAGGCACAAACCAGGNGTCAAANTTTTTTTGGTCTATCAAAATTTTGGCANCCAGAGTATAANTATTGGTTATAGNACAAAGACTTCAAATCNTGNGCNCTGGCCTTTTATGNCAANTTTTTTACCAATGGGGTCCTGGCATTGGAATTTTTTCNTTTTTTTTTT]
[+] EMBL CF320437             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TATCGTTCTCAAAGTCAGCGTTAGACTTTTACAACCATTAATATATATATATTTTTCTGCCAGGAATTCAAACTAaaaa                                                                                                                                                                                                                                                 ]
[-] EMBL CF320438             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCGTTCTCAAAGTCAGCGTTAGACTTTTACAACCATTAATATATATATATTTTTCTGCCAGGAATTCAAACTAaaaaa                                                                                                                                                                                                                                                ]




>consensus_6246#0
CGTCCTGTATCTTCCTTCATCTTCTTGCCATAGTTGGGCACTTGGGCTGGTGCGCCGCCT
AGGCACCGGCGGCGGAGGCGGCGGCGCGCCACACGCGATAAGACCGAGGCAAGGCGGCGG
CGTGCCGGTGCACCGCGCGCGCACCACACGCGACAAGCTCGCAAGGCGGGGAGAATGCCA
CAACGATTGCACGCGCCGCCCAACAGTTTGACGGATACCAGGAGCGGGAGATTGCACACC
AAAGGTCAAACAGGTTGATCTAAAGATGCATAGGGACCAGCTGATTGGGTCGGCATTCAT
CGCATTTGGCATCATATTATTTGTGGGTTTCTTCTATGCTGCGGTTTTGACCAAGATGCT
TCCACCATATGAAAACCGGTTTCTGTCAGCAATCCAAAACGATAGGTATTACTGCCTGCT
CATACCGTTGACACTCCCAGTGATAATCGTGGCTGTCTATTTGCATTGGCTAAGCATGAA
GATGTTCAAGCATGCATGAAGCCTCATTCTAAAAGTCTGAAGTTCTTTCTCAAATGACAA
CCTCATTATCATGGTGACCAAAAACATACTCCCTCCGTCCCAAAAAAAACTCAACCTGGA
CAAAGGGGATTCATGAGGTTTTTTGGGACGGAGGGAGTATATTACTAGTATCGTTCTCAA
AGTCAGCGTTAGACTTTTACAACCATTAATATATATATATTTTTCTGCCAGGAATTCAAA
CTATACATAATTGTACTATCGTAGAACTATTTGTCCCCAGCTCCGTCTGTTGCACTAGAA
AAAAAACAGACTAATTTAGGATCAAGGCACAAACAAGTGTCAAATTTTTTTTGTCTATCA
AATTTTGCCACCAGAGTATAATTATTGTTTATAGTACAAAGACTTCAAATCNTGNGCNCT
GGCCTTTTATGNCAANTTTTTTACCAATGGGGTCCTGGCATTGGAATTTTTTCNTTTTTT
TTTT
clustalw multiple alignements is not computed in this case