cluster # 6258

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Oryza sativa
cluster # 6258 cluster # 6258 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6258#0 length = 2163 sequences # 4
consensusID : consensus_6258#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2163
fasta sequence
                              [TCTTATTCTCGCAACCACGCTGATCCCAAACCCCATTCCGCCTCTCTCGGCCGGTCTCTCCTCGCGGGATAGGAGAAAGTCAGCGGCGGGCGCGAGGTCGGTCGAGTGGAGCGGCCGGCAAGAAGAGCGAGGAGATTTAGGAGGGGGAGATGAAGCCCGTCGAGCGCGCCAAGCTGGTGCGGAGCCTCCGGCAGGAGT-CGCGGCGGCTGCGCCTGCTCGTCCTCGTCATCGGCTTCTTCCTCGTCACACTCACCTTCGTCGTCATCTCCAAGCCCGACGCCCTCCTCTTCAACCTGAACGGCCGGCTGTCGGTGGATCATGCGCCGCGCTCGCTCCTGATCCGCCAGCGGATCCACGCCGACTCCAGGAGATCCGCCGATACCTTCCCCGCCGCCGAGGATCCCAAGGTGGTGGACGAAGACGAAGGCGCCG-AGGACGCCACCGCCAAAGGGACTAGTGAGGAGGAGAAGAGGCTACTCAGTAGTGAGCCCGAGCAAGGCAAGAACGAGGAGGCGGCCACTGCATCTGAGGTGTTAGGTGGTGGAGGCGAAGAGGATAATAAGAACGGCGAGGAAGAGGGGCACACACAGCATAGCGAGGTGACCCTCCCGACTGTTTCCAATTATACCATCCGTGATGCTGAAGACACTGACAATGGCAAGCAAGAAGATGGCAAACCGAATGAAAAATATGAATTTGAGATGGACGCGGACAAGGGAGACAATGTGGAACCAGAAACTGATAATGAGGAGTGGAACAAGAAACCACTATGTGATTTCTCAAACTTCAGAGCAAATGTCTGTGAGATGCGGGGCAACATTAGGATTCATCCCAATGCAAGTTCTGTCATGTACATGGAACCTGCCAGTTCAAAGAGAGAGGAGATATGGAAAGTTAAGCCTTACCCTCGTAAAGGTGACGAGCTCTGCCTCGGCCATATTACAGAGATAACCGTGAAATCAAGCAAAGTGGCACCTGAGTGTAGCAAGTATCACAATGTGCCTGCAGTGGTCTTTGCTCTGACTGGATACACTGGAAATCTATTCCATGACTTCACCGACGTGCTTGTCCCTCTTTTCACAACCGCAAGCGAATTCAATGGCGAAGTTCAATTCCTAATCACAGACATGGCTATTTGGTGGACAAGGAAGCATAAGGTGGTGTTTGATAAGCTATCCAAGTACCCCTTGATTGACTTCAACAATGACGATCAAGTGCATTGCTTCAAGCATGCAATTGTTGGCCTTCATGCTTACATGGAGTTCACAATTGACTCATCAAAAGCTCCACATAACTACTCAATGGTGGATTTTAATAGGTTCATGCGCAGGACCTACTCACTGCCTAGGGATTTTGTAACTGCGCTTGGTGAGATTCCCAAAGCCAAGCCAAGACTGCTCATTATATCCAGGCAGAGGACAAGAATGTTTCTCAATCTTAACGAGATAGTGGCGATGGCTGAGGAGATAGGTTACGAGGTGGTGGTTGAAGAGGC-CAAT-GTG-AGCTCTGATCTCT--CCCATTTTGG-CAAGGTTGTC-AACTCTGTT-GATGT-GA-TGAT-GGGTGT-CCATGGTGCTGGA-CTCACCAACT-GTGTGTTCTTGCCACAAAACGCTACATTGATT-CAGATTGTGCCATGGGGTGGACTAGACTGGATAT-CAAGAATTGATTTCGGCAACCCAGCGGAACAAATGGGCCTGCGTTACAAGCAGTATAGCATTGGTGTACATGAAAGCAGCCTTACTGATCAATATCCCCTAGATCATGAGATCTTCACAAATCCTCTTTCGTTCCACAAACATGGATTTGAATTCATCAGGCAGACCTTCATGGATAAGCAAAACGTCAAGCTTGATTGCAACCGATTCAAGCCTGTACTCTTGGAGGTTCTTGATCAATTGAATCAATAGAAACCACTAATATATTGCAAGCTGGGGCACTGTTTTTGTCCACAAATTTTTGGTTTCACCGTTCTTTATTTAGTAAAATTTGTTGGCCATCTTCTGATTACATGAGCAAGGCAGGAATTAATTTATTTGTCTAATGTGTAGAAAATTATGCTGCCACATGGATTTAAACTCAGATATCCATGATGTGTCATCTAGATCATATTTCTCGATTGGAAATAGAAAATAATTTATTTTTTACTTGTAAATTTTTGTCAAAAAAAAA]

[+] EMBL AK103888             [TCTTATTCTCGCAACCACGCTGATCCCAAACCCCATTCCGCCTCTCTCGGCCGGTCTCTCCTCGCGGGATAGGAGAAAGTCAGCGGCGGGCGCGAGGTCGGTCGAGTGGAGCGGCCGGCAAGAAGAGCGAGGAGATTTAGGAGGGGGAGATGAAGCCCGTCGAGCGCGCCAAGCTGGTGCGGAGCCTCCGGCAGGAGT CGCGGCGGCTGCGCCTGCTCGTCCTCGTCATCGGCTTCTTCCTCGTCACACTCACCTTCGTCGTCATCTCCAAGCCCGACGCCCTCCTCTTCAACCTGAACGGCCGGCTGTCGGTGGATCATGCGCCGCGCTCGCTCCTGATCCGCCAGCGGATCCACGCCGACTCCAGGAGATCCGCCGATACCTTCCCCGCCGCCGAGGATCCCAAGGTGGTGGACGAAGACGAAGGCGCCG AGGACGCCACCGCCAAAGGGACTAGTGAGGAGGAGAAGAGGCTACTCAGTAGTGAGCCCGAGCAAGGCAAGAACGAGGAGGCGGCCACTGCATCTGAGGTGTTAGGTGGTGGAGGCGAAGAGGATAATAAGAACGGCGAGGAAGAGGGGCACACACAGCATAGCGAGGTGACCCTCCCGACTGTTTCCAATTATACCATCCGTGATGCTGAAGACACTGACAATGGCAAGCAAGAAGATGGCAAACCGAATGAAAAATATGAATTTGAGATGGACGCGGACAAGGGAGACAATGTGGAACCAGAAACTGATAATGAGGAGTGGAACAAGAAACCACTATGTGATTTCTCAAACTTCAGAGCAAATGTCTGTGAGATGCGGGGCAACATTAGGATTCATCCCAATGCAAGTTCTGTCATGTACATGGAACCTGCCAGTTCAAAGAGAGAGGAGATATGGAAAGTTAAGCCTTACCCTCGTAAAGGTGACGAGCTCTGCCTCGGCCATATTACAGAGATAACCGTGAAATCAAGCAAAGTGGCACCTGAGTGTAGCAAGTATCACAATGTGCCTGCAGTGGTCTTTGCTCTGACTGGATACACTGGAAATCTATTCCATGACTTCACCGACGTGCTTGTCCCTCTTTTCACAACCGCAAGCGAATTCAATGGCGAAGTTCAATTCCTAATCACAGACATGGCTATTTGGTGGACAAGGAAGCATAAGGTGGTGTTTGATAAGCTATCCAAGTACCCCTTGATTGACTTCAACAATGACGATCAAGTGCATTGCTTCAAGCATGCAATTGTTGGCCTTCATGCTTACATGGAGTTCACAATTGACTCATCAAAAGCTCCACATAACTACTCAATGGTGGATTTTAATAGGTTCATGCGCAGGACCTACTCACTGCCTAGGGATTTTGTAACTGCGCTTGGTGAGATTCCCAAAGCCAAGCCAAGACTGCTCATTATATCCAGGCAGAGGACAAGAATGTTTCTCAATCTTAACGAGATAGTGGCGATGGCTGAGGAGATAGGTTACGAGGTGGTGGTTGAAGAGGC CAAT GTG AGCTCTGATCTCT  CCCATTTTGG CAAGGTTGTC AACTCTGTT GATGT GA TGAT GGGTGT CCATGGTGCTGGA CTCACCAACT GTGTGTTCTTGCCACAAAACGCTACATTGATT CAGATTGTGCCATGGGGTGGACTAGACTGGATAT CAAGAATTGATTTCGGCAACCCAGCGGAACAAATGGGCCTGCGTTACAAGCAGTATAGCATTGGTGTACATGAAAGCAGCCTTACTGATCAATATCCCCTAGATCATGAGATCTTCACAAATCCTCTTTCGTTCCACAAACATGGATTTGAATTCATCAGGCAGACCTTCATGGATAAGCAAAACGTCAAGCTTGATTGCAACCGATTCAAGCCTGTACTCTTGGAGGTTCTTGATCAATTGAATCAATAGAAACCACTAATATATTGCAAGCTGGGGCACTGTTTTTGTCCACAAATTTTTGGTTTCACCGTTCTTTATTTAGTAAAATTTGTTGGCCATCTTCTGATTACATGAGCAAGGCAGGAATTAATTTATTTGTCTAATGTGTAGAAAATTATGCTGCCACATGGATTTAAACTCAGATATCCATGATGTGTCATCTAGATCATATTTCTCGATTGGAAATAGAAAATAATTTATTTTTTACTTGTA                   ]
[+] EMBL C26695               [                                       GCCTCTCTCGGCCGGTCTCTCCTCGCGGGATAGGAGAAAGTCAGCGGCGGGCGCNAGGTCGGTCGAGTGGAGCGNCCGGCAAGAAGAGCGAGGAGATTTAGGAGGGGGAGATGAAGCCCGTCGAGCGCGCCAAGCTGGTGCGGA NCTCCGGCAGGAGTCCGCGGCGGCTGCGCCTGCTCGTCCTCGTCATCGGCTTCTTCCTCGTCACACTCACCTTCGTCGTCATCTCCAAGCCCGACGCCCTCCTCTTCAACCTGAACGGCCGGCTNTCGGTGGATCATGCGCCGGGTTCGTTCCTGATCCG CAACGGATTCACGNCGACTCCAGGNGATCCGCCGATAACTTTCCCGCCGCCGAGGATCCAAAGTTGGTTGACGAAGACGAA GNGCCGAAGGACG CACC NCAAAGGGACTAATTAGGAGGAGAAGAGGtnatta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF323054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AACATTAGGATTCATCCCAATGCAAGTTCTGTCATGTACATGGAACCTGCCAGTTCAAAGAGAGAGGAGATATGGAAAGTTAAGCCTTACCCTCGTAAAGGTGACGAGCTCTGCCTCGGCCATATTACAGAGATAACCGTGAAATCAAGCAAAGTGGCACCTGAGTGTAGCAAGTATCACAATGTGCCTGCAGTGGTCTTTGCTCTGACTGGATACACTGGAAATCTATTCCATGACTTCACCGACGTGCTTGTCCCTCTTTTCACAACCGCAAGCGAATTCAATGGCGAAGTTCAATTCCTAATCACAGACATGGCTATTTGGTGGACAAGGAAGTATAAGGTGGTGTTTGATAAGCTATCCAAGTACCCCTTGATTGACTTCAACAATGACGATCAAGTGCATTGCTTCAAGCATGCAATTGTTGGCCTTCATGCTTACATGGAGTTCACAATTGACTCATCAAAAGCTCCACATAACTACTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU082865             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGAGGCTCAATGGTGNCGCTCTGATCTCTNCCCCATTTTGGCCAAGGTTGTCAAACTCTGTTNGATGTGGATTGATCNGGTGTCCCATGGTGCTGGACCTCACCAACTGGTGTGTTCTTGCCACAANACGCTACCTTGATTCCAGATTGTGCCATGGGGTGGACNAGACTGGATATCCAAGAATTGATTTCGGCAACCCAGCGGAACAAATGGGCCTGCGTTACAAGCAGTATAGCATTGGTGTACATGAAAGCAGCCTTACTGATCAATATCCCCTAGATCATGAGATCTTCACAAATCCTCTTTCGTTCCACAAACATGGATTTGAATTCATCAGGCAGACCTTCATGGATAAGCANAACGTCAAGCTTGATTGCANCCGATTCAAGCCTGTACTCTTGGAGGTTCTTGATCAATTGAATCAATAGAAACCACTAATATATTGCAAGCTGGGGCACTGTTTTTGTCCACAAATTTTTGGTTTCACCGTTCTTTATTTAGTAAAATTTGTTGGCCATCTTCTGATTACATGAGCAAGGCAGGAATTAATTTATTTGTCTAATGTGTAGAAAATTATGCTGCCACATGGATTTAAACTCAGATATCCATGATGTGTCATCTAGATCATATTTCTCGATTGGAAATAGAAAATAATTTATTTTTTACTTGTAAATTTTTGTCAAAAAAAAA]




>consensus_6258#0
TCTTATTCTCGCAACCACGCTGATCCCAAACCCCATTCCGCCTCTCTCGGCCGGTCTCTC
CTCGCGGGATAGGAGAAAGTCAGCGGCGGGCGCGAGGTCGGTCGAGTGGAGCGGCCGGCA
AGAAGAGCGAGGAGATTTAGGAGGGGGAGATGAAGCCCGTCGAGCGCGCCAAGCTGGTGC
GGAGCCTCCGGCAGGAGTCGCGGCGGCTGCGCCTGCTCGTCCTCGTCATCGGCTTCTTCC
TCGTCACACTCACCTTCGTCGTCATCTCCAAGCCCGACGCCCTCCTCTTCAACCTGAACG
GCCGGCTGTCGGTGGATCATGCGCCGCGCTCGCTCCTGATCCGCCAGCGGATCCACGCCG
ACTCCAGGAGATCCGCCGATACCTTCCCCGCCGCCGAGGATCCCAAGGTGGTGGACGAAG
ACGAAGGCGCCGAGGACGCCACCGCCAAAGGGACTAGTGAGGAGGAGAAGAGGCTACTCA
GTAGTGAGCCCGAGCAAGGCAAGAACGAGGAGGCGGCCACTGCATCTGAGGTGTTAGGTG
GTGGAGGCGAAGAGGATAATAAGAACGGCGAGGAAGAGGGGCACACACAGCATAGCGAGG
TGACCCTCCCGACTGTTTCCAATTATACCATCCGTGATGCTGAAGACACTGACAATGGCA
AGCAAGAAGATGGCAAACCGAATGAAAAATATGAATTTGAGATGGACGCGGACAAGGGAG
ACAATGTGGAACCAGAAACTGATAATGAGGAGTGGAACAAGAAACCACTATGTGATTTCT
CAAACTTCAGAGCAAATGTCTGTGAGATGCGGGGCAACATTAGGATTCATCCCAATGCAA
GTTCTGTCATGTACATGGAACCTGCCAGTTCAAAGAGAGAGGAGATATGGAAAGTTAAGC
CTTACCCTCGTAAAGGTGACGAGCTCTGCCTCGGCCATATTACAGAGATAACCGTGAAAT
CAAGCAAAGTGGCACCTGAGTGTAGCAAGTATCACAATGTGCCTGCAGTGGTCTTTGCTC
TGACTGGATACACTGGAAATCTATTCCATGACTTCACCGACGTGCTTGTCCCTCTTTTCA
CAACCGCAAGCGAATTCAATGGCGAAGTTCAATTCCTAATCACAGACATGGCTATTTGGT
GGACAAGGAAGCATAAGGTGGTGTTTGATAAGCTATCCAAGTACCCCTTGATTGACTTCA
ACAATGACGATCAAGTGCATTGCTTCAAGCATGCAATTGTTGGCCTTCATGCTTACATGG
AGTTCACAATTGACTCATCAAAAGCTCCACATAACTACTCAATGGTGGATTTTAATAGGT
TCATGCGCAGGACCTACTCACTGCCTAGGGATTTTGTAACTGCGCTTGGTGAGATTCCCA
AAGCCAAGCCAAGACTGCTCATTATATCCAGGCAGAGGACAAGAATGTTTCTCAATCTTA
ACGAGATAGTGGCGATGGCTGAGGAGATAGGTTACGAGGTGGTGGTTGAAGAGGCCAATG
TGAGCTCTGATCTCTCCCATTTTGGCAAGGTTGTCAACTCTGTTGATGTGATGATGGGTG
TCCATGGTGCTGGACTCACCAACTGTGTGTTCTTGCCACAAAACGCTACATTGATTCAGA
TTGTGCCATGGGGTGGACTAGACTGGATATCAAGAATTGATTTCGGCAACCCAGCGGAAC
AAATGGGCCTGCGTTACAAGCAGTATAGCATTGGTGTACATGAAAGCAGCCTTACTGATC
AATATCCCCTAGATCATGAGATCTTCACAAATCCTCTTTCGTTCCACAAACATGGATTTG
AATTCATCAGGCAGACCTTCATGGATAAGCAAAACGTCAAGCTTGATTGCAACCGATTCA
AGCCTGTACTCTTGGAGGTTCTTGATCAATTGAATCAATAGAAACCACTAATATATTGCA
AGCTGGGGCACTGTTTTTGTCCACAAATTTTTGGTTTCACCGTTCTTTATTTAGTAAAAT
TTGTTGGCCATCTTCTGATTACATGAGCAAGGCAGGAATTAATTTATTTGTCTAATGTGT
AGAAAATTATGCTGCCACATGGATTTAAACTCAGATATCCATGATGTGTCATCTAGATCA
TATTTCTCGATTGGAAATAGAAAATAATTTATTTTTTACTTGTAAATTTTTGTCAAAAAA
AAA
clustalw multiple alignements is not computed in this case