cluster # 6260

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Oryza sativa
cluster # 6260 cluster # 6260 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6260#0 length = 1510 sequences # 4
consensusID : consensus_6260#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1510
fasta sequence
                              [CCCACAACATGACGCTAGGGCCACTAATTCACCCCGTGACCGTCCTAGAGCAATGCCATGTCTCGCCATCTCCGGCGCCGGCGGCCGGCCAGCCACGGTCGCTGCCGCTCACGTTCTTCGACCTCGTCTTCTTGGACTTCCCGCCCGTGCAGCGCCTCTTCTTCTACGACAACGCCGACCTCCGCGACGCCCATNACTTCCTCCTCCGCGAGCTTCCCCTCTTCAGGGAGTCCCTGGCCGCTGCCCTGCACCATTTCTACCCCTTGGTCGGGAAGCTGCCGTGCGGGATACGGGAGCGCATGTCGCCGCCGGAGGTCGCGTACTCGGATGGCTACTCCGTCTGCCTGACCGTCGCCGTCAGCAGCGACGACTTCCAGGACCTCGCCGGCGACCACCCGCGCGACACCGCGAGGCTACGCCCGCTGCTGCCTCCGCTGCCCAAGCATGGTAGCTCGCAGGACGTGCTCGCCGTCCAGGTCACCGTGTTCCCTCGCGCCGGCATCTGCGTCGGCACGACGCTGCACCACGCCGTGGCCGACGGTTCCAGCTACGTGCACTTCCTCAAGACGTGGGCCGCCATTCACCGCCTCGGCGACGAGCGCAGGAAAGCGGTGGTGGTGGACCACACGCCGCCGCTGTTCGACCGTGGCGTCGTGCAGGACGGCGACGGACTCCGGGAGGCGTTTATCCGCGACCACCGGGATCTCGTGGAGTCCGGTGACAAGCGGCTCGACGACTGGGACCTCAGCCGGAGGCCGGACACCGTGCTCGCGACGTTCAGGTTCACGGACGAGCTGCTCCGCAAGCTGGGGAGGCATGTCGAGGCGGAGACCTCGGCGCGGTGCTCGCCCTACGCGCTGGCGTGCGGCGCCGCGTGGGCCGGCATCGTGCGCGCGCGAGGCGTGGGCGGCGGCGACGTCGCGCGGTTCGGGTTCGTGACCGGGTGCAAG-CCCCGCGTGAGCCCGCCGATACCGTCGAGCTACTTCGGCAACTGCCTGGGGCTGTGCTTCGTGGAGGCCAAGCGGAGACACCTCACCGCGGCCAGCGCATCGGCGGCCATCTGGCGCGTGATCGCGGGGCTCGCCGAGCAGGGGCGGGCGCTCCGTGACGCCCACGGCTGGGTGCGCGGCGCGCGGGAGTACGCGGCGGCGCGCGCGGTGACGGTGGCGGGTTCACCGAAGCTGGGCGTGTACGCGGCGGCGGATCTCGGCGCGACGTGGGGGGGTCGGCCCCGGAAGGTGGAGATAGCGTCGGTGGAGCGGACGGGCGCGCTGGCGCTGGCGGAGAGCGGCCGCCGTGGCGACCGGGACGGCGGCGGCATCGAGGTCGGGGTGGCGCTGCCGCGCGCGGAGATGGAGGCGTTCCGCGCGTTCCACGTCGAGCTGGTCCGGCTGCTAGACGCCACTACCCACTAGTGCTGAGTGGTGACGCGGCCTCCCCCTTGCCGCCAGTGTAAAAAAATCGTGCCATTATTCCCTCTGCTTCGGTGTTTCTGGAACTGGGACCAGTC]

[+] EMBL AK060507             [CCCACAACATGACGCTAGGGCCACTAATTCACCCCGTGACCGTCCTAGAGCAATGCCATGTCTCGCCATCTCCGGCGCCGGCGGCCGGCCAGCCACGGTCGCTGCCGCTCACGTTCTTCGACCTCGTCTTCTTGGACTTCCCGCCCGTGCAGCGCCTCTTCTTCTACGACAACGCCGACCTCCGCGACGCCCATGACTTCCTCCTCCGCGAGCTTCCCCTCTTCAGGGAGTCCCTGGCCGCTGCCCTGCACCATTTCTACCCCTTGGTCGGGAAGCTGCCGTGCGGGATACGGGAGCGCATGTCGCCGCCGGAGGTCGCGTACTCGGATGGCTACTCCGTCTGCCTGACCGTCGCCGTCAGCAGCGACGACTTCCAGGACCTCGCCGGCGACCACCCGCGCGACACCGCGAGGCTACGCCCGCTGCTGCCTCCGCTGCCCAAGCATGGTAGCTCGCAGGACGTGCTCGCCGTCCAGGTCACCGTGTTCCCTCGCGCCGGCATCTGCGTCGGCACGACGCTGCACCACGCCGTGGCCGACGGTTCCAGCTACGTGCACTTCCTCAAGACGTGGGCCGCCATTCACCGCCTCGGCGACGAGCGCAGGAAAGCGGTGGTGGTGGACCACACGCCGCCGCTGTTCGACCGTGGCGTCGTGCAGGACGGCGACGGACTCCGGGAGGCGTTTATCCGCGACCACCGGGATCTCGTGGAGTCCGGTGACAAGCGGCTCGACGACTGGGACCTCAGCCGGAGGCCGGACACCGTGCTCGCGACGTTCAGGTTCACGGACGAGCTGCTCCGCAAGCTGGGGAGGCATGTCGAGGCGGAGACCTCGGCGCGGTGCTCGCCCTACGCGCTGGCGTGCGGCGCCGCGTGGGCCGGCATCGTGCGCGCGCGAGGCGTGGGCGGCGGCGACGTCGCGCGGTTCGGGTTCGTGACCGGGTGCAAG CCCCGCGTGAGCCCGCCGATACCGTCGAGCTACTTCGGCAACTGCCTGGGGCTGTGCTTCGTGGAGGCCAAGCGGAGACACCTCACCGCGGCCAGCGCATCGGCGGCCATCTGGCGCGTGATCGCGGGGCTCGCCGAGCAGGGGCGGGCGCTCCGTGACGCCCACGGCTGGGTGCGCGGCGCGCGGGAGTACGCGGCGGCGCGCGCGGTGACGGTGGCGGGTTCACCGAAGCTGGGCGTGTACGCGGCGGCGGATCTCGGCGCGACGTGGGGGGGTCGGCCCCGGAAGGTGGAGATAGCGTCGGTGGAGCGGACGGGCGCGCTGGCGCTGGCGGAGAGCGGCCGCCGTGGCGACCGGGACGGCGGCGGCATCGAGGTCGGGGTGGCGCTGCCGCGCGCGGAGATGGAGGCGTTCCGCGCGTTCCACGTCGAGCTGGTCCGGCTGCTAGACGCCACTACCCACTAGTGCTGAGTGGTGACGCGGCCTCCCCCTTGCCGCCAGTGTAAAAAAATCGTGCCATTATTCCCTCTGCTTCGGTGTTTCTGGAACTGGGACCAGTC]
[+] EMBL OSS1540A             [                                                                                                                           TCGTCTTCTTGGACTTCCCGCCCGTGCAGCGCCTCTTCTTCTACGACAACGCCGACCTCCGCGACGCCCATNACTTCCTCCTCCGCGAGCTTCCCCTCTTCAGGGAGTCCCTGGCCGCTGCCCTGCACCATTTCTACCCCTTGGTCGGGAAGCTGCCGTGCGGGATACGGGAGCGCATGTCGCCGCCGGAGGTCGCGTACTCGGATGGCTACTCCGTCTGCCTGACCGTCGNCGTCAGCAGCGACGACTTCCAGGANCTCGCCGGCGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS1526A             [                                                                                                                           TCGTCTTCTTGGACTTCCCGCCCGTGCAGCGCCTCTTCTTCTACGACAACGCCGACCTTCGCGACGCCCATNACTTCCTCCTCCGCGAGCTTCCCCTCTTCAGGGAGTCCCTGGCCGCTGCCCTGCACCATTTCTANCCCTTGGTCGGGAAGCTGCCGTNCGGGATANGGGAGCGCATGTCGCCGCCGGAGGTCGCGTANTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA754369             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACGAGCGCAGGAAAGCGGTGGTGGTGGACCACACGCCGCCGCTGTTCGACCGTGGCGTCGTGCAGGACGGCGACGGACTCCGGGAGGCGTTTATCCGCGACCACCGGGATCTCGTGGAGTCCGGTGACAAGCGGCTCGACGACTGGGACCTCAGCCGGAGGCCGGACACCGTGCTCGCGACGTTCAGGTTCACGGACGAGCTGCTCCGCAAGCTGGGGAGGCATGTCGAGGCGGAGACCTCGGCGCGGTGCTCGCCCTACGCGCTGGCGTGCGGCGCCGCGTGGGCCGGCATCGTGCGCGCGCGAGGCGTGGGCGGCGGCGACGTCGCGCGGTTCGGGTTCGTGACCGGGTGCAAGCCCCCGCGTGAGCCCGCCGATACCGTCGAGCTACTTCGGCAACTGCCTGGGGCTGTGCTTCGTGGAGGCCAAGCGGAGACACCTCACCGCGGCCAGCGCATCGGCGGGCATCTGGCGCGTGATCGCGGGGCTCGCCGAGCAGGGG TGGAGCTTCGTGACG CCACGGCTGGCTGCGCGGCGCGCGGTAGT CGCGGC GCGCGCGCGCTGA GGTGGCGGCTTC TCGAACTTGGGCCTGTA                                                                                                                                                                                                                                                                                                                              ]




>consensus_6260#0
CCCACAACATGACGCTAGGGCCACTAATTCACCCCGTGACCGTCCTAGAGCAATGCCATG
TCTCGCCATCTCCGGCGCCGGCGGCCGGCCAGCCACGGTCGCTGCCGCTCACGTTCTTCG
ACCTCGTCTTCTTGGACTTCCCGCCCGTGCAGCGCCTCTTCTTCTACGACAACGCCGACC
TCCGCGACGCCCATNACTTCCTCCTCCGCGAGCTTCCCCTCTTCAGGGAGTCCCTGGCCG
CTGCCCTGCACCATTTCTACCCCTTGGTCGGGAAGCTGCCGTGCGGGATACGGGAGCGCA
TGTCGCCGCCGGAGGTCGCGTACTCGGATGGCTACTCCGTCTGCCTGACCGTCGCCGTCA
GCAGCGACGACTTCCAGGACCTCGCCGGCGACCACCCGCGCGACACCGCGAGGCTACGCC
CGCTGCTGCCTCCGCTGCCCAAGCATGGTAGCTCGCAGGACGTGCTCGCCGTCCAGGTCA
CCGTGTTCCCTCGCGCCGGCATCTGCGTCGGCACGACGCTGCACCACGCCGTGGCCGACG
GTTCCAGCTACGTGCACTTCCTCAAGACGTGGGCCGCCATTCACCGCCTCGGCGACGAGC
GCAGGAAAGCGGTGGTGGTGGACCACACGCCGCCGCTGTTCGACCGTGGCGTCGTGCAGG
ACGGCGACGGACTCCGGGAGGCGTTTATCCGCGACCACCGGGATCTCGTGGAGTCCGGTG
ACAAGCGGCTCGACGACTGGGACCTCAGCCGGAGGCCGGACACCGTGCTCGCGACGTTCA
GGTTCACGGACGAGCTGCTCCGCAAGCTGGGGAGGCATGTCGAGGCGGAGACCTCGGCGC
GGTGCTCGCCCTACGCGCTGGCGTGCGGCGCCGCGTGGGCCGGCATCGTGCGCGCGCGAG
GCGTGGGCGGCGGCGACGTCGCGCGGTTCGGGTTCGTGACCGGGTGCAAGCCCCGCGTGA
GCCCGCCGATACCGTCGAGCTACTTCGGCAACTGCCTGGGGCTGTGCTTCGTGGAGGCCA
AGCGGAGACACCTCACCGCGGCCAGCGCATCGGCGGCCATCTGGCGCGTGATCGCGGGGC
TCGCCGAGCAGGGGCGGGCGCTCCGTGACGCCCACGGCTGGGTGCGCGGCGCGCGGGAGT
ACGCGGCGGCGCGCGCGGTGACGGTGGCGGGTTCACCGAAGCTGGGCGTGTACGCGGCGG
CGGATCTCGGCGCGACGTGGGGGGGTCGGCCCCGGAAGGTGGAGATAGCGTCGGTGGAGC
GGACGGGCGCGCTGGCGCTGGCGGAGAGCGGCCGCCGTGGCGACCGGGACGGCGGCGGCA
TCGAGGTCGGGGTGGCGCTGCCGCGCGCGGAGATGGAGGCGTTCCGCGCGTTCCACGTCG
AGCTGGTCCGGCTGCTAGACGCCACTACCCACTAGTGCTGAGTGGTGACGCGGCCTCCCC
CTTGCCGCCAGTGTAAAAAAATCGTGCCATTATTCCCTCTGCTTCGGTGTTTCTGGAACT
GGGACCAGTC
clustalw multiple alignements is not computed in this case