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Oryza sativa
cluster # 6278 cluster # 6278       Sequences # 4       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6278#0 length = 1602 sequences # 1  
consensus_6278#1 length = 703 sequences # 1  
consensus_6278#2 length = 596 sequences # 1  
consensus_6278#3 length = 572 sequences # 1  

consensusID : consensus_6278#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1602
fasta sequence
                              [AGTCCAGCCGACCCGACCCAAACCTCACCGCCGCCGTCGCCGTTGCCGCCGCCGCCGCCGCGTGCGCCCCTGCGGAAATCTAGGGTCCTCGGCGGCGTCCCCCTCGCTCCGCCCCCGCGTTCTCTGCGGCGGCCTGAGCGACGCGCCGACCGGCCGAAGGCTCCGCGTTGAGCTGGCCATGCAGGTGGTGGGGACGGCCGCCGCGTTCTCGCCGGCGGTGACGCCGTCTCCGGCGAGGAGGCGGGCCGTGGATTCAGGGAGGAGGTTTTCTCGAAGCTGTCGGTCGGGGAGAGTTTCAGTCTCAGCAGTTGGGTACTCCCAATTGGAGGTCAGAAGAGTTAGCTATCGACCTCCAGGAACCGAACAAAACTTGTTGAATGAAATTAGCCTCAATCTTAAGGAGAAAAGTTTTGGATTACTTTTTGGACGAAGCGGGAGCGGAAAAACTACTCTTTTGCAGCTTTTGGCAGGTCTATCGGAACCTACCCATGGGACAATTTGCATACAGAAGTACAACGATAGTGGAAATCCTATGGGTCCACCAGAATTATTAACTGCTCAAAGAGTTGGTATCGTGTTTCAGTTTCCTGAGAGGTTTGAGTTGCCACTTTCACCATTAAGTAATATAAACTCAATAAGTTTGTATATGGTCAGTTGAAATGTTTAAACTGTTCCAGTAAACAATAAGATCGTTTACATATCTCATGTAGGTACTTCTTAGCAGATACTGTGCTTGAGGAAATTACTTTTGGATGGCCACGGCAAAATACAGACTTTCTTTTTAGGGAGAAGCTTGCTTTAAAACTTCAAAATGCCATTAACTCGGTTGGTCTGAATGGCATTTCATTGGAAGAAGATCCACAATCTCTAAGTGGTGGGTTTAAACGGCGACTTGCTTTGGCAATTCAACTGGTCCAAACTCCTGATCTATTATTGCTTGATGAGCCTCTTGCTGGTCTTGATTGGAAAGCTCGTGCTGACGTTGTGAATCTTCTCAAGGACCTAAAGAAGGATCATACTATACTGGCTGTAAGTCATGACCTAAGGGAATTGTACCCACTAGTTGACCGCTCATGGAGAATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCTGTTTGTACTGTCAATCAAGCTGGCACTGTATACTAGCTGTCTCCAGATCAGGAGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCCCCAAATTCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAGATGCCTGTCTGCCAGGTAGCTGAATTCCAACTCCAGAACTGCATAAGCCATTCCTCCGGGACAGGGTTCTGCAAAAAAATGCAGGGTTCGCATAAAAACCTGTATAATTTGGAATGCAGAGCAAAACAACACTGAACATCACACTGACATTTATGCTGAAGAGGAGCTAACTGATTGTGCTACTGTTAGGAAACATAAAAAACCTTGTTCTACTGCCTGACTATTCCATTCGCGTATGTACAACCCGTTCTCCTCCAGATTTCTTTGATCTGTTCTATATTGTACTAAATAATGCATGGA]

[+] EMBL AK106821             [AGTCCAGCCGACCCGACCCAAACCTCACCGCCGCCGTCGCCGTTGCCGCCGCCGCCGCCGCGTGCGCCCCTGCGGAAATCTAGGGTCCTCGGCGGCGTCCCCCTCGCTCCGCCCCCGCGTTCTCTGCGGCGGCCTGAGCGACGCGCCGACCGGCCGAAGGCTCCGCGTTGAGCTGGCCATGCAGGTGGTGGGGACGGCCGCCGCGTTCTCGCCGGCGGTGACGCCGTCTCCGGCGAGGAGGCGGGCCGTGGATTCAGGGAGGAGGTTTTCTCGAAGCTGTCGGTCGGGGAGAGTTTCAGTCTCAGCAGTTGGGTACTCCCAATTGGAGGTCAGAAGAGTTAGCTATCGACCTCCAGGAACCGAACAAAACTTGTTGAATGAAATTAGCCTCAATCTTAAGGAGAAAAGTTTTGGATTACTTTTTGGACGAAGCGGGAGCGGAAAAACTACTCTTTTGCAGCTTTTGGCAGGTCTATCGGAACCTACCCATGGGACAATTTGCATACAGAAGTACAACGATAGTGGAAATCCTATGGGTCCACCAGAATTATTAACTGCTCAAAGAGTTGGTATCGTGTTTCAGTTTCCTGAGAGGTTTGAGTTGCCACTTTCACCATTAAGTAATATAAACTCAATAAGTTTGTATATGGTCAGTTGAAATGTTTAAACTGTTCCAGTAAACAATAAGATCGTTTACATATCTCATGTAGGTACTTCTTAGCAGATACTGTGCTTGAGGAAATTACTTTTGGATGGCCACGGCAAAATACAGACTTTCTTTTTAGGGAGAAGCTTGCTTTAAAACTTCAAAATGCCATTAACTCGGTTGGTCTGAATGGCATTTCATTGGAAGAAGATCCACAATCTCTAAGTGGTGGGTTTAAACGGCGACTTGCTTTGGCAATTCAACTGGTCCAAACTCCTGATCTATTATTGCTTGATGAGCCTCTTGCTGGTCTTGATTGGAAAGCTCGTGCTGACGTTGTGAATCTTCTCAAGGACCTAAAGAAGGATCATACTATACTGGCTGTAAGTCATGACCTAAGGGAATTGTACCCACTAGTTGACCGCTCATGGAGAATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCTGTTTGTACTGTCAATCAAGCTGGCACTGTATACTAGCTGTCTCCAGATCAGGAGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCCCCAAATTCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAGATGCCTGTCTGCCAGGTAGCTGAATTCCAACTCCAGAACTGCATAAGCCATTCCTCCGGGACAGGGTTCTGCAAAAAAATGCAGGGTTCGCATAAAAACCTGTATAATTTGGAATGCAGAGCAAAACAACACTGAACATCACACTGACATTTATGCTGAAGAGGAGCTAACTGATTGTGCTACTGTTAGGAAACATAAAAAACCTTGTTCTACTGCCTGACTATTCCATTCGCGTATGTACAACCCGTTCTCCTCCAGATTTCTTTGATCTGTTCTATATTGTACTAAATAATGCATGGA]


>consensus_6278#0 AGTCCAGCCGACCCGACCCAAACCTCACCGCCGCCGTCGCCGTTGCCGCCGCCGCCGCCG CGTGCGCCCCTGCGGAAATCTAGGGTCCTCGGCGGCGTCCCCCTCGCTCCGCCCCCGCGT TCTCTGCGGCGGCCTGAGCGACGCGCCGACCGGCCGAAGGCTCCGCGTTGAGCTGGCCAT GCAGGTGGTGGGGACGGCCGCCGCGTTCTCGCCGGCGGTGACGCCGTCTCCGGCGAGGAG GCGGGCCGTGGATTCAGGGAGGAGGTTTTCTCGAAGCTGTCGGTCGGGGAGAGTTTCAGT CTCAGCAGTTGGGTACTCCCAATTGGAGGTCAGAAGAGTTAGCTATCGACCTCCAGGAAC CGAACAAAACTTGTTGAATGAAATTAGCCTCAATCTTAAGGAGAAAAGTTTTGGATTACT TTTTGGACGAAGCGGGAGCGGAAAAACTACTCTTTTGCAGCTTTTGGCAGGTCTATCGGA ACCTACCCATGGGACAATTTGCATACAGAAGTACAACGATAGTGGAAATCCTATGGGTCC ACCAGAATTATTAACTGCTCAAAGAGTTGGTATCGTGTTTCAGTTTCCTGAGAGGTTTGA GTTGCCACTTTCACCATTAAGTAATATAAACTCAATAAGTTTGTATATGGTCAGTTGAAA TGTTTAAACTGTTCCAGTAAACAATAAGATCGTTTACATATCTCATGTAGGTACTTCTTA GCAGATACTGTGCTTGAGGAAATTACTTTTGGATGGCCACGGCAAAATACAGACTTTCTT TTTAGGGAGAAGCTTGCTTTAAAACTTCAAAATGCCATTAACTCGGTTGGTCTGAATGGC ATTTCATTGGAAGAAGATCCACAATCTCTAAGTGGTGGGTTTAAACGGCGACTTGCTTTG GCAATTCAACTGGTCCAAACTCCTGATCTATTATTGCTTGATGAGCCTCTTGCTGGTCTT GATTGGAAAGCTCGTGCTGACGTTGTGAATCTTCTCAAGGACCTAAAGAAGGATCATACT ATACTGGCTGTAAGTCATGACCTAAGGGAATTGTACCCACTAGTTGACCGCTCATGGAGA ATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCTGTTTG TACTGTCAATCAAGCTGGCACTGTATACTAGCTGTCTCCAGATCAGGAGCAAGCAAATGC AAGCAGAACTTCAATGGAGAGATAATTGATTTTTCCCCAAATTCCCACCGCTGGAACGAA GAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAGATGCCTGTCTGCCAGGTA GCTGAATTCCAACTCCAGAACTGCATAAGCCATTCCTCCGGGACAGGGTTCTGCAAAAAA ATGCAGGGTTCGCATAAAAACCTGTATAATTTGGAATGCAGAGCAAAACAACACTGAACA TCACACTGACATTTATGCTGAAGAGGAGCTAACTGATTGTGCTACTGTTAGGAAACATAA AAAACCTTGTTCTACTGCCTGACTATTCCATTCGCGTATGTACAACCCGTTCTCCTCCAG ATTTCTTTGATCTGTTCTATATTGTACTAAATAATGCATGGA



consensusID : consensus_6278#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 703
fasta sequence
                              [CAAGGNCCTAAAGAAGGATCCTACTATACTGGCTGTAAGTCATGACCTAAGGGAATTGTACCCACTAGTTGACCGGTCATGGAGAATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCNGGNTGTACTGTCAATGCTGGCACTGTATACTAGCTGTCTCCAGATCAGGTTCGGTCAATTAGACAGCTGTATCTGTAGTCTTATGTTATATTGGTCTGTAATATTTTTTCACAGTTACAAATCAAGGATGGTCGTAACTAAATTATTTGGTCATAAGTATGACTTGNGCAGTTTGAGAATTTCAGGAGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCTCCAAATTCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAGATGCCTGTCTGCCAGGTAGCTGAATTCCAACACCAGAACTGCATAAGCCATTCCTTGGGGACAGGGTTCTGTAAAAGAATGCAGGGTTCCCATAAAAACCTGNATAATTTGGAATGCAGAACAAAACAACTCTGAACATCACACTGACGTTTATGCTGAAGAGGAGCTAACCCGATTGNGCCTACTGGGTAGGAAAACATAAAAAAAGCTNGGTCTACTGGCCTGNCTATTCCNTTTCNCGTATGTACCAACCCCNNTTCCC]

[+] EMBL CA767346             [CAAGGNCCTAAAGAAGGATCCTACTATACTGGCTGTAAGTCATGACCTAAGGGAATTGTACCCACTAGTTGACCGGTCATGGAGAATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCNGGNTGTACTGTCAATGCTGGCACTGTATACTAGCTGTCTCCAGATCAGGTTCGGTCAATTAGACAGCTGTATCTGTAGTCTTATGTTATATTGGTCTGTAATATTTTTTCACAGTTACAAATCAAGGATGGTCGTAACTAAATTATTTGGTCATAAGTATGACTTGNGCAGTTTGAGAATTTCAGGAGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCTCCAAATTCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAGATGCCTGTCTGCCAGGTAGCTGAATTCCAACACCAGAACTGCATAAGCCATTCCTTGGGGACAGGGTTCTGTAAAAGAATGCAGGGTTCCCATAAAAACCTGNATAATTTGGAATGCAGAACAAAACAACTCTGAACATCACACTGACGTTTATGCTGAAGAGGAGCTAACCCGATTGNGCCTACTGGGTAGGAAAACATAAAAAAAGCTNGGTCTACTGGCCTGNCTATTCCNTTTCNCGTATGTACCAACCCCNNTTCCC]


>consensus_6278#1 CAAGGNCCTAAAGAAGGATCCTACTATACTGGCTGTAAGTCATGACCTAAGGGAATTGTA CCCACTAGTTGACCGGTCATGGAGAATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTT ATCTGTGTAAGGATGCTTCNGGNTGTACTGTCAATGCTGGCACTGTATACTAGCTGTCTC CAGATCAGGTTCGGTCAATTAGACAGCTGTATCTGTAGTCTTATGTTATATTGGTCTGTA ATATTTTTTCACAGTTACAAATCAAGGATGGTCGTAACTAAATTATTTGGTCATAAGTAT GACTTGNGCAGTTTGAGAATTTCAGGAGCAAGCAAATGCAAGCAGAACTTCAATGGAGAG ATAATTGATTTTTCTCCAAATTCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGAT TTTTGCCTGGGTAAGGGTAAGATGCCTGTCTGCCAGGTAGCTGAATTCCAACACCAGAAC TGCATAAGCCATTCCTTGGGGACAGGGTTCTGTAAAAGAATGCAGGGTTCCCATAAAAAC CTGNATAATTTGGAATGCAGAACAAAACAACTCTGAACATCACACTGACGTTTATGCTGA AGAGGAGCTAACCCGATTGNGCCTACTGGGTAGGAAAACATAAAAAAAGCTNGGTCTACT GGCCTGNCTATTCCNTTTCNCGTATGTACCAACCCCNNTTCCC



consensusID : consensus_6278#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 596
fasta sequence
                              [CCCAAACCTCACCGCCGCCGTCGCCGTTGCCGCCGCCGCCGCCGCGTGCGCCCCTGCGGAAATCTAGGGTCCTCGGCGGCGTCCCCCTCGCTCCGCCCCCGCGTTCTCTGCGGCGGCCTGAGCGACGCGCCGACCGGCCGAAGGCTCCGCGTTGAGCTGGCCATGCAGGTGGGTGGGGACGGNCGCCGCGTTCTCGCCGGCGGTGACGCCGTCTCCGGCGAGGAGGCGGGCCGTGGATTCAGGGAGGAGGTTTTCTCGAAGCTGTCGGACGGGGATAGTTTCAGTCTCAACAGTTGGGTACTCCCAATTGGAAGGCATAAGAGTTAGCTATCGACCTCCAGGAACCGAAGAAAACTTGATCAATGAAATTAACGTCAATCTTAAGAAAAAAAGTTTTGGATTACTTTTTGCACTAACCGNTATCGTAGACACTACTCTTTTGCGAATTGTTGAGCCCTAAGCGTATCTTACTATGTGATAATTGTATTCCGTATACACGACCACACTGGTAATGTTATCCGGTATCTTGAACTTCGAGTGCTGGTATACTTTGGAGCGGNACTCTAGTGATTGGAGGTCATGGAGTTTGAGATGGA]

[+] EMBL CA753867             [CCCAAACCTCACCGCCGCCGTCGCCGTTGCCGCCGCCGCCGCCGCGTGCGCCCCTGCGGAAATCTAGGGTCCTCGGCGGCGTCCCCCTCGCTCCGCCCCCGCGTTCTCTGCGGCGGCCTGAGCGACGCGCCGACCGGCCGAAGGCTCCGCGTTGAGCTGGCCATGCAGGTGGGTGGGGACGGNCGCCGCGTTCTCGCCGGCGGTGACGCCGTCTCCGGCGAGGAGGCGGGCCGTGGATTCAGGGAGGAGGTTTTCTCGAAGCTGTCGGACGGGGATAGTTTCAGTCTCAACAGTTGGGTACTCCCAATTGGAAGGCATAAGAGTTAGCTATCGACCTCCAGGAACCGAAGAAAACTTGATCAATGAAATTAACGTCAATCTTAAGAAAAAAAGTTTTGGATTACTTTTTGCACTAACCGNTATCGTAGACACTACTCTTTTGCGAATTGTTGAGCCCTAAGCGTATCTTACTATGTGATAATTGTATTCCGTATACACGACCACACTGGTAATGTTATCCGGTATCTTGAACTTCGAGTGCTGGTATACTTTGGAGCGGNACTCTAGTGATTGGAGGTCATGGAGTTTGAGATGGA]


>consensus_6278#2 CCCAAACCTCACCGCCGCCGTCGCCGTTGCCGCCGCCGCCGCCGCGTGCGCCCCTGCGGA AATCTAGGGTCCTCGGCGGCGTCCCCCTCGCTCCGCCCCCGCGTTCTCTGCGGCGGCCTG AGCGACGCGCCGACCGGCCGAAGGCTCCGCGTTGAGCTGGCCATGCAGGTGGGTGGGGAC GGNCGCCGCGTTCTCGCCGGCGGTGACGCCGTCTCCGGCGAGGAGGCGGGCCGTGGATTC AGGGAGGAGGTTTTCTCGAAGCTGTCGGACGGGGATAGTTTCAGTCTCAACAGTTGGGTA CTCCCAATTGGAAGGCATAAGAGTTAGCTATCGACCTCCAGGAACCGAAGAAAACTTGAT CAATGAAATTAACGTCAATCTTAAGAAAAAAAGTTTTGGATTACTTTTTGCACTAACCGN TATCGTAGACACTACTCTTTTGCGAATTGTTGAGCCCTAAGCGTATCTTACTATGTGATA ATTGTATTCCGTATACACGACCACACTGGTAATGTTATCCGGTATCTTGAACTTCGAGTG CTGGTATACTTTGGAGCGGNACTCTAGTGATTGGAGGTCATGGAGTTTGAGATGGA



consensusID : consensus_6278#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 572
fasta sequence
                              [AGAGGACGAGACAAGGGGGAATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCTGTTTGTACTGTCAATGCTGGCACTGTGTACTAGCTGTCTCCAGATCAGGAGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCTCCAAATTCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAGATGCCTGTCTGCCAGGTAGCTGAATTCCAACACCAGAACTGCATAAGCCATTCCTTGGGGACAGGGTTCTGTAAAAGAATGCAGGGTTCGCATAAAAACCTGTATAATTTGGAATGCAGAACAAAACAACTCTGAACATCACACTGACATTTATGCTGAAGAGGAGCTAACCGATTGTGCTACTGTTAGGAAACATAAAAAAGCTTGTTTTACTGCCTGACTATTCCATTCGGGTATGTACAACCCGTATTCCTCCAGATTTCTTTGATCTGTTCTATATTGTACTGAATAATGCATGAATCCTTATTTTCGTGCTAAAAAAAAAAAAAAAAA]

[-] EMBL CA760574             [AGAGGACGAGACAAGGGGGAATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCTGTTTGTACTGTCAATGCTGGCACTGTGTACTAGCTGTCTCCAGATCAGGAGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCTCCAAATTCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAGATGCCTGTCTGCCAGGTAGCTGAATTCCAACACCAGAACTGCATAAGCCATTCCTTGGGGACAGGGTTCTGTAAAAGAATGCAGGGTTCGCATAAAAACCTGTATAATTTGGAATGCAGAACAAAACAACTCTGAACATCACACTGACATTTATGCTGAAGAGGAGCTAACCGATTGTGCTACTGTTAGGAAACATAAAAAAGCTTGTTTTACTGCCTGACTATTCCATTCGGGTATGTACAACCCGTATTCCTCCAGATTTCTTTGATCTGTTCTATATTGTACTGAATAATGCATGAATCCTTATTTTCGTGCTAAAAAAAAAAAAAAAAA]


>consensus_6278#3 AGAGGACGAGACAAGGGGGAATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTG TGTAAGGATGCTTCTGTTTGTACTGTCAATGCTGGCACTGTGTACTAGCTGTCTCCAGAT CAGGAGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCTCCAAATT CCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAGA TGCCTGTCTGCCAGGTAGCTGAATTCCAACACCAGAACTGCATAAGCCATTCCTTGGGGA CAGGGTTCTGTAAAAGAATGCAGGGTTCGCATAAAAACCTGTATAATTTGGAATGCAGAA CAAAACAACTCTGAACATCACACTGACATTTATGCTGAAGAGGAGCTAACCGATTGTGCT ACTGTTAGGAAACATAAAAAAGCTTGTTTTACTGCCTGACTATTCCATTCGGGTATGTAC AACCCGTATTCCTCCAGATTTCTTTGATCTGTTCTATATTGTACTGAATAATGCATGAAT CCTTATTTTCGTGCTAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      AGTCCAGCCGACCCGACCCAAACCTCACCGCCGCCGTCGCCGTTGCCGCCGCCGCCGCCG 60
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      CGTGCGCCCCTGCGGAAATCTAGGGTCCTCGGCGGCGTCCCCCTCGCTCCGCCCCCGCGT 120
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      TCTCTGCGGCGGCCTGAGCGACGCGCCGACCGGCCGAAGGCTCCGCGTTGAGCTGGCCAT 180
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      GCAGGTGGTGGGGACGGCCGCCGCGTTCTCGCCGGCGGTGACGCCGTCTCCGGCGAGGAG 240
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      GCGGGCCGTGGATTCAGGGAGGAGGTTTTCTCGAAGCTGTCGGTCGGGGAGAGTTTCAGT 300
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      CTCAGCAGTTGGGTACTCCCAATTGGAGGTCAGAAGAGTTAGCTATCGACCTCCAGGAAC 360
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      CGAACAAAACTTGTTGAATGAAATTAGCCTCAATCTTAAGGAGAAAAGTTTTGGATTACT 420
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      TTTTGGACGAAGCGGGAGCGGAAAAACTACTCTTTTGCAGCTTTTGGCAGGTCTATCGGA 480
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      ACCTACCCATGGGACAATTTGCATACAGAAGTACAACGATAGTGGAAATCCTATGGGTCC 540
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      ACCAGAATTATTAACTGCTCAAAGAGTTGGTATCGTGTTTCAGTTTCCTGAGAGGTTTGA 600
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      GTTGCCACTTTCACCATTAAGTAATATAAACTCAATAAGTTTGTATATGGTCAGTTGAAA 660
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      TGTTTAAACTGTTCCAGTAAACAATAAGATCGTTTACATATCTCATGTAGGTACTTCTTA 720
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      GCAGATACTGTGCTTGAGGAAATTACTTTTGGATGGCCACGGCAAAATACAGACTTTCTT 780
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      TTTAGGGAGAAGCTTGCTTTAAAACTTCAAAATGCCATTAACTCGGTTGGTCTGAATGGC 840
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      ATTTCATTGGAAGAAGATCCACAATCTCTAAGTGGTGGGTTTAAACGGCGACTTGCTTTG 900
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ------------------------------------------------------------
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      GCAATTCAACTGGTCCAAACTCCTGATCTATTATTGCTTGATGAGCCTCTTGCTGGTCTT 960
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      -----------------------------------CAAGGNCCTAAAGAAGGATCCTACT 25
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      GATTGGAAAGCTCGTGCTGACGTTGTGAATCTTCTCAAGGACCTAAAGAAGGATCATACT 1020
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      ATACTGGCTGTAAGTCATGACCTAAGGGAATTGTACCCACTAGTTGACCGGTCATGGAG- 84
consensus_6278#3      -----------------------------------------AGAGGACGAGACAAGGGGG 19
consensus_6278#0      ATACTGGCTGTAAGTCATGACCTAAGGGAATTGTACCCACTAGTTGACCGCTCATGGAG- 1079
consensus_6278#2      -------------CCCAAACCTCACCGCCGCCGTCGCCGTTGCCGCCGCCGCCGCCGCG- 46
                                                                          *   * * 

consensus_6278#1      AATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCNGGNT 144
consensus_6278#3      AATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCTGTTT 79
consensus_6278#0      AATGGAAATGGGGGGAGTTTTGAAGGAAGAAGCTTTATCTGTGTAAGGATGCTTCTGTTT 1139
consensus_6278#2      --TGCGCCCCTGCGGAAATCTAGGGTCCTCGGCGGCGTCCCCCTCGCTCCGCCCCCGCGT 104
                        **       * ***  * *   *      **    **    *      **  * *  *

consensus_6278#1      GTACTGTCAAT---GCTGGCACTGTATACTAGCTGTCTCCAGATCAGGTTCGGTCAATTA 201
consensus_6278#3      GTACTGTCAAT---GCTGGCACTGTGTACTAGCTGTCTCCAGATCAGG------------ 124
consensus_6278#0      GTACTGTCAATCAAGCTGGCACTGTATACTAGCTGTCTCCAGATCAGG------------ 1187
consensus_6278#2      TCTCTGCGGCG---GCCTGAGCGACGCGCCGACCGGCCGAAGGCTCCGCGTTGA------ 155
                         ***        **  *  *      *   * * *   **     *            

consensus_6278#1      GACAGCTGTATCTGTAGTCTTATGTTATATTGGTCTGTAATATTTTTTCACAGTTACAAA 261
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      ------------------------------------------------------------
consensus_6278#2      ------------------------------------------------------------
                                                                                  

consensus_6278#1      TCAAGGATGGTCGTAACTAAATTATTTGGTCATAAGTATGACTTGNGCAGTTTGAGAATT 321
consensus_6278#3      ------------------------------------------------------------
consensus_6278#0      ------------------------------------------------------------
consensus_6278#2      --------GCTGGCCATGCAGGTGGGTGGGGACGGNCGCCGCGTTCTCGCCGGCGGTGAC 207
                                                                                  

consensus_6278#1      TCAGGAGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCTCCAAAT 381
consensus_6278#3      -----AGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCTCCAAAT 179
consensus_6278#0      -----AGCAAGCAAATGCAAGCAGAACTTCAATGGAGAGATAATTGATTTTTCCCCAAAT 1242
consensus_6278#2      GCCGTCTCCGGCGA--GGAGGCGGGCCGTGGATTCAGGGAGGA---GGTTTTCTCGAAGC 262
                             *  ** *  * * ** *  * *  **  ** **  *     ***** * **  

consensus_6278#1      TCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAG 441
consensus_6278#3      TCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAG 239
consensus_6278#0      TCCCACCGCTGGAACGAAGAAACAATGTCTGATGCAGATTTTTGCCTGGGTAAGGGTAAG 1302
consensus_6278#2      TGTC-------GGACG--GGGATAGTTTCAGTCTCA-ACAGTTGGGTACTCCCAATTGGA 312
                      *  *       * ***  *  * * * ** *   ** *   ***  *         *   

consensus_6278#1      ATGCCTGTCTGCCAGGTAGCTGAATTCCAACACCAGAACTGCATAAGCCATTCCTTGGGG 501
consensus_6278#3      ATGCCTGTCTGCCAGGTAGCTGAATTCCAACACCAGAACTGCATAAGCCATTCCTTGGGG 299
consensus_6278#0      ATGCCTGTCTGCCAGGTAGCTGAATTCCAACTCCAGAACTGCATAAGCCATTCCTCCGGG 1362
consensus_6278#2      AGGCATAAGAGTTAGCTATC-GACCTCCAGGAACCGAA---GAAAACTTGATCAATGAAA 368
                      * ** *    *  ** ** * **  ****    * ***    * **     **       

consensus_6278#1      ACAGGGTTCTGTAAAAGAATGCAGGGTTCCCATAAAAACCTGNATAATTTGGAATGCAGA 561
consensus_6278#3      ACAGGGTTCTGTAAAAGAATGCAGGGTTCGCATAAAAACCTGTATAATTTGGAATGCAGA 359
consensus_6278#0      ACAGGGTTCTGCAAAAAAATGCAGGGTTCGCATAAAAACCTGTATAATTTGGAATGCAGA 1422
consensus_6278#2      TTAACGTCAATCTTAAGAAAAAAAGTTTTGGATTACTTTTTGCACTAACCGNTATCGTAG 428
                        *  **       ** **   * * **   ** *     ** *  *   *  **     

consensus_6278#1      ACAAAACAACTCTGAACATCACACTGACGTTTATGCTGAAGAGGAGCTAACCCGATTGNG 621
consensus_6278#3      ACAAAACAACTCTGAACATCACACTGACATTTATGCTGAAGAGGAGCTAACC-GATTGTG 418
consensus_6278#0      GCAAAACAACACTGAACATCACACTGACATTTATGCTGAAGAGGAGCTAACT-GATTGTG 1481
consensus_6278#2      ACACTACTCTTTTGCGAATTG--TTGAGCCCTAAGCGTATCTTACTATGTGATAATTGTA 486
                       **  **     **   **     ***    ** **  *        *      ****  

consensus_6278#1      CCTACTGGGTAGGAAAACATAAAAAAAGCTNGGTCTACTGGCCTGNCTATTCCNTTTCNC 681
consensus_6278#3      C-TACTG--TTAGGAAACATAAAAAA-GCTTGTTTTACTG-CCTGACTATTCCATT-CGG 472
consensus_6278#0      C-TACTG--TTAGGAAACATAAAAAA-CCTTGTTCTACTG-CCTGACTATTCCATT-CGC 1535
consensus_6278#2      TTCCGTATACACGACCACACTGGTAATGTTA--TCCGGTATCTTGAAC-TTCGAGTGCTG 543
                           *      *   ***     **   *   *    *  * **    ***   * *  

consensus_6278#1      GTATGTACC-AACCCCNNTTCCC------------------------------------- 703
consensus_6278#3      GTATGTAC--AACCCGTATTCCTCCAGATTTCTTTGATCTGTTCTATATTGTACTGAATA 530
consensus_6278#0      GTATGTAC--AACCCGTTCTCCTCCAGATTTCTTTGATCTGTTCTATATTGTACTAAATA 1593
consensus_6278#2      GTATACTTTGGAGCGGNACTCTAGTGATTGGAGGTCATGGAGTTTGAGATGGA------- 596
                      ****       * *     **                                       

consensus_6278#1      ------------------------------------------
consensus_6278#3      ATGCATGAATCCTTATTTTCGTGCTAAAAAAAAAAAAAAAAA 572
consensus_6278#0      ATGCATGGA--------------------------------- 1602
consensus_6278#2      ------------------------------------------
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)