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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6302#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 984 fasta sequence
[AGGTTGGNNGTCATGTTTGGTCTCATTGCACAGCATGTCTTAGCAAGGAGTAAGCAAGATTTCTCAATAACTTGGCCACATGTAGGGCGTACGACCCACTAGCGTGGGGTACACTATACAAAAACAAGGAACCAAGCATGCCCAAAACTTCGTAGATCTAATTCACACAGCATACCTAGCAATCTGAAATATACAATTGAGCTAGCATTTCAGCAAACTGAAACCAGAACATGGAGAATTGCCAGCCTCATGATAATGACATCTGTAGAACACCCAAATTGCCGCTAAATTAACAAATGGCCTTCTTCCCTCTCCTTCAAAG-TTTTTTTTCCCAATTAAAAGGCATTTCACAGCTAGACTTTCCTGTACATAACGTGATATATATCCCCCGGAAATATGGGGGAAAGGAAGCCAATAAAACTTCTCTTG-CAAAATCACGTCGATACGAAATTACTTGCTAAGCATTGGCCTTACT-GCTGCATAGCTCGATAGCTGGAGCGGCTTGAAGGGAAAACCGGGGCAGCGCCAAAGTCACTGGGTCTTAGGCCAAACTGATGATGCCCATCCCCGGAGTGCCCATGGCCTCTCCTTGCTCTTGACTTCTCAACCCGGGTTCGGCGGAAGACTTCTTGAATTTGGCGGTCATTTTCCTTCAGCATCTGATCGACATTGCCTGAAGGGCAAATTAGAGGCCCAGAATGGTGGATCTTGTTACCCTTTGATCCATAGCCAATAGCTCCATCCACCCTGCTACTCCTGTCATCTTTCTGCTGAAATACTTGATCATACTTTCCACTACTACTGAAACGCTCATTTATAGATTCAGACAGCCTCCGTTCATGCGGAAAGGCTTCGGCTTGAGTAACCACTGTTCCATTGCCATTATCTGAACGAATATTTGATCTTGTTGATACAACCACACGGAAGTCCGATGCGTTTGCAACACCAGAAAGATGAATATCGCCATTTTCACTCCGTCCAGCC]
[-] EMBL C22410 [AGGTTGGNNGTCATGTTTGGTCTCATTGCACAGCATGTCTTAGCAAGGAGTAAGCAAGATTTCTCAATAACTTGGCCACATGTAGGGCGTACGACCCACTAGCGTGGGGTACACTATACAAAAACAAGGAACCAAGCATGCCCAAAACTTCGTAGATCTAATTCACACAGCATACCTAGCAATCTGAAATATACAATTGAGCTAGCATTTCAGCAAACTGAAACCAGAACATGGAGAATTGCCAGCCTCATGATAATGACATCTGTAGAACACCCAAATTGCCGCTAAATTAACAAATGGCCTTCTTCCCTCTCCTTCAAAG TTTTTTTTCCCAATTAAAAGGCATTTCACAGCTAGACTTTCCTGTACATAACGTGATATATATCCCCCGGAAATATGGGGGAAAGGAAGCCAATAAAACTTCTCTTGCCAAAATCACNTCNATACGAAATTACTTGCTAAGCATTGGCCTTACTGGCTGCATAACTC ]
[+] EMBL CB624160 [ GAAACCAGAACATGGAGAATTGCCAGCCTCATGATAATGACATCTGTAGAACACCCAAATTGCCGCTAAATTAACAAATGGCCTTCTTCCCTCTCCTTCAAAGTTTTTTTTTCCCAATTAAAAGGCATTTCACAGCTAGACTTTCCTGTACATAACGTGATATATATCCCCCGGAAATATGGGGGAAAGGAAGCCAATAAAACTTCTCTTG CAAAATCACGTCGATACGAAATTACTTGCTAAGCATTGGCCTTACT GCTGCATAGCTCGATAGCTGGAGCGGCTTGAAGGGAAAACCGGGGCAGCGCCAAAGTCACTGGGTCTTAGGCCAAACTGATGATGCCCATCCCCGGAGTGCCCATGGCCTCTCCTTGCTCTTGACTTCTCAACCCGGGTTCGGCGGAAGACTTCTTGAATTTGGCGGTCATTTTCCTTCAGCATCTGATCGACATTGCCTGAAGGGCAAATTAGAGGCCCAGAATGGTGGATCTTGTTACCCTTTGATCCATAGCCAATAGCTCCATCCACCCTGCTACTCCTGTCATCTTTCTGCTGAAATACTTGATCATACTTTCCACTACTACTGAAACGCTCATTTATAGATTCAGACAGCCTCCGTTCATGCGGAAAGGCTTCGGCTTGAGTAACCACTGTTCCATTGCCATTATCTGAACGAATATTTGATCTTGTTGATACAACCACACGGAAGTCCGATGCGTTTGCAACACCAGAAAGATGAATATCGCCATTTTCACTCCGTCCAGCC]
[+] EMBL CB625862 [ AAACCAGAACATGGAGACCTTCCAGCCTCATGATAATGACATCTGTAAAACACCCAAATTGCCGCTAAATTAACAAATGGCCTTCTTCCCTCTCCTTCAAAGTTTTTTTTTCCCAATTAAAAGGCATTTCACAGCTAGACTTTCCTGTACATAACGTGATATATATCCCCCGGAAATATGGGGGAAAGGAAGCCAATAAAACTTCTCTTG CAAAATCACGTCGATACGAAATTACTTGCTAAGCATTGGCCTTACT GCTGCATAGCTCGATAGCTGGAGCGGCTTGAAGGGAAAACCGGGGCAGCGCCAAAGTCACTGGGTCTTAGGCCAAACTGATGATGCCCATCCCCGGAGTGCCCATGGCCTCTCCTTGCTCTTGACTTCTCAACCCGGGTTCGGCGGAAAACTTCTTGAATTTGGCGGTCATTTTCCTTCAGCATCTGATCGACATTGCCTGAAGGGCAAATTAAAGGCCCAGAATGGTGGATCTTGTTACCCTTTGATCCATAGCCAATAGCTCCATCCACCCTGCTACTCCTGTCATCTTTCTGCTGAAATACTTGATCATACTTTCCACTACTACTGAAACGCTCATTTATAGATTCAGACAGCCTCCGTTCATGCGGAAAGGCTTCGGCTTGAGTAACCACTGTTCCATTGCCATTATCTGAACGAATATTTGATCTTGTTGATACAACCACACGGAAGTCCGATGCGTTTGCAACACCAGAAAGATGAA ]
[-] EMBL CF324411 [ AATTGCCAGCCTCATGATAATGACATCTGTAGAACACCCAAATTGCCGCTAAATTAACAAATGGCCTTCTTCCCTCTCCTTCAAAG TTTTTTTTCCCAATTAAAAGGCATTTCACAGCTAGACTTTCCTGTACATAACGTGATATATATCCCCCGGAAATATGGGGGAAAGGAAGCCAATAAAACTTCTCTTG CAAAATCACGTCGATACGAAATTACTTGCTAAGCATTGGCCTTACT GCTGCATAGCTCGATAGCTGGAGCGGCTTGAAGGGAAGACCGGGGCAGCGCCAAAGTCACTGGGTCTTAGGCCAAACTGATGATGCCCATCCCCGGAGTGCCCATGGCCTCTCCTTGCTCTTGACTTCTCAACCCGGGTTCGGCGGAAGACTTCTTGAATTTGGCGGTCATTTTCCTTCAGCATCTGATCGACATTGCCTGAAGGGCAAATTAGAGGCCCAGAATGGT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||