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Oryza sativa
cluster # 6331 cluster # 6331       Sequences # 4       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6331#0 length = 2930 sequences # 2  
 consensus_6331#1 length = 386 sequences # 1  
consensus_6331#2 length = 322 sequences # 1  
consensusID : consensus_6331#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2930
fasta sequence 
                              [GGCGAGCACACATGGCCATGGGGGATGACTACTCCAAGGCGAGGCAAGCCCTGGCGGTGAGCGCCCACGAGTGCTCGCTGGTGGACGCGGTCTCCTCCGCGGCCACGCCGCCGACCGCGGACGACGGGGAGGGGCACGCGGCGGGCTTCTTCGAGGGCTTCGTGCTGGGCGGGATCCGCGTGGACAGCGTCCGCCCGGGCCTCGTCGACTGCTCCTTCACCGTCCCCTCCAGGCTCACCGATCGGAGCGGGTGCCTGGCCGCGGGCGCGGTGGTGTCGCTGGTGGACGAGGTGGGGTCGGCGGCCTCCATCGCCGACGGGCGCCCCGTCAAGGTCTCCACCGACATGTCCGTCTCCTTCGTCTCCCTCGCGCAGGCCCGCCCCGGCGACCGCCTGCGGATCACGGCCAGGGCGCTCGGCCACAAGGGGGCGTACTCCGCCACCCACGTCCTCATCTCCAACGCCGCCACCGGCGAGGTCGTCGCCGAGGGCAGGCACTCCCTCTTCGGCAGGATGAAGGTCGTCTCCACCTCCACCGCCACCGCCACCAGCAAGCTGTGACCATGGATTCCACCCTGCTGCCATGGTTAATTAAAGTGTGAGTATTATGGCCCTTCTAAGTAGCGTAATAAGGAGGTTTTGATTTTGATCACAAATGTCTTCAGTATCTGATTGAGCATACGACACACCTGAACCTGATTATACCATTTTTCTTTTTTGCTTTACTAGCTGTAAATTCAGTTATCGAATTACCTGCCCCAGTACAGTGTTAATAACATTGTCAACTTTCATTATCTGGGTCGCCAAGTTTGGGCGTTCATTCATTTTATGTTCATTAGTTTCAGAGCAGTTGATAGAGTATATGAAAAATAAATGAAAAGAATTGTAACTATTTTTGTCTTTGAGATTTATGGATTGCAGCTCGAAATGCTGTTGAAAGCGTTAACTGGTAGTTTGGTAGAAAGGGAGTATGAGTATGAGCATGTTGCGCAGTTCAACACTAAGCTCAATTCCCACGCGAATTTCGTGAGGTCGAATTCTGTTTGCTAGGTGTGTTAGCGAAAAAACTGCTATTTGTTAGGAGATAAAGGATGATTCCTCCAATGTGCTATCATGAATTGAGAGTTGGATGGTTTCATGGTGTCATCTAATTGGTGTAGTTTTTCATTTTGACATTCACATTTGGTAGGATGTAAGGAGTGTTGATGAATCCTGGAAATTCTACCTTAAAGGAATGTCTGATTTAGCACTACTTACTGCTCCTCATAGGAGAATGTTGAACTTGTAGTCCATTAGGCATGGTTGTGCGTTGCAATTAATTTATAGGTAAAACTTTTATATATGCGTTATATGCAATTTAAAAGCCAATGTTGAAAAATAAACCACATTGAAAATATCTTAAAATCTTATTCAAAATTAAGTTTGAAAATTCGATTTTTGGCTGTCTTTAGCTTACTAGAGCAACCAATGGGACTCTAAAAATCTTGCTTACACTTAACCATCGTTTAATTTTGCCACCTGGCCATTGATTTGTCTGTTGTTGTTGTCGTCGTCGTTTTGTGAGTGCGTGGAAAGAGGGCGGGATTGCTAATTGGCGTGCACGCGCTAGCTAACGAAGTAACGCGCGTTTGGCCCACCAGGTTCATATTTCAGCCCAGTCCGAGAAGCGGCCCATGCGTGTACGGGAGATCACGCGGTGATGAACGCTGATCTGACTGATCTTTAATCGTGAATGCTGATTTGATTTTTTTCTATTTTTGGGAGACGCGCGCATCTACCGTAATAACTCTGTTTAGTTTTAGATACGTAATTAAGAGATACGTAATTAAGGTAAGTTTTTTTTCTCTCTTTTTAAGTGTTTTTATTAACAGATTGAAAGAAATCTACCCATGAAAAAAACTTTCAAATAAAATTGAAAACTTTCTATTAAAAAATTAAAAACATACCTAAAGTTTTAAAAATTCAACTTAAAATTTGAAACTCTAAACACAAAATTTAAAAAATTACAAGGGAGAATAGCCTATTTGGTCCCTAAAGTTTCGTCTTAAGGTCAATATGGTACTTAATATTTTATTTTGTCCAATCAGATGCTTAAACTTTATCATATGGTCCAATATGAATTTTAGGCCCACCAGAAACACCATGTAGACATGCCATGTCATCATCTTATTAAAAATGGATAGTGAAATATCTAATTTGTCTATTTGCATGTGATACAAAATACTAGAACTAATTAATCTTATATGATTAGTTAATTTAATCTAATCCCAGGAATTGATATAAACACAAAATGGATTATGTTACATCTATATACGAATCGATATATTTGATTATTTGCGAATGCAAGTGTGTATGACATTTTTTCTTTTTCTTTTTTCACTCTTATGTTGTATGTAAGGGTATATTAGGCATTTCATGACAGATTTGTATAAGATGATGAGATGGCATGCCTATGTGGTGTTTTTGGGTCCAAGGACCATAGTATACTGAAAAATAGACTTTGAGGACCAATTTGAACCAATTAAAATATCAAGGACCATATTGACCTCAGAGCGAAAGTTGAAGGGCCAAATAGGCTATTATCCCAAATTACAACTTGTAATTTGAAACTTTCAACTCAAAATTTGAAAAACTTTCAATTTAAATTGGAAAACTTTCAAGTCAAGATTTTAAAACTTTCAACTCAAAATTTGAAAACTTTCAATTTAACTTGGAAAACTTTCAAGTTAATATTTGAAAACTTTCAATTTAAATTTAAAAACTTTCAACTCAAATTTGAAAATTTTCAATTTGGATTGGAAAACTTTCAAGTCAAGATTTGAAAACTTTCAACTAAAAAAATTTGAAAGCATGTATGTTGCGGATTGAAAACAAATGGAAAGAACAAGTAAAAAAGTTAAAACGTGACGAGGAGAGGGTGCGCGAAAATAG]

[+] EMBL AK068649             [GGCGAGCACACATGGCCATGGGGGATGACTACTCCAAGGCGAGGCAAGCCCTGGCGGTGAGCGCCCACGAGTGCTCGCTGGTGGACGCGGTCTCCTCCGCGGCCACGCCGCCGACCGCGGACGACGGGGAGGGGCACGCGGCGGGCTTCTTCGAGGGCTTCGTGCTGGGCGGGATCCGCGTGGACAGCGTCCGCCCGGGCCTCGTCGACTGCTCCTTCACCGTCCCCTCCAGGCTCACCGATCGGAGCGGGTGCCTGGCCGCGGGCGCGGTGGTGTCGCTGGTGGACGAGGTGGGGTCGGCGGCCTCCATCGCCGACGGGCGCCCCGTCAAGGTCTCCACCGACATGTCCGTCTCCTTCGTCTCCCTCGCGCAGGCCCGCCCCGGCGACCGCCTGCGGATCACGGCCAGGGCGCTCGGCCACAAGGGGGCGTACTCCGCCACCCACGTCCTCATCTCCAACGCCGCCACCGGCGAGGTCGTCGCCGAGGGCAGGCACTCCCTCTTCGGCAGGATGAAGGTCGTCTCCACCTCCACCGCCACCGCCACCAGCAAGCTGTGACCATGGATTCCACCCTGCTGCCATGGTTAATTAAAGTGTGAGTATTATGGCCCTTCTAAGTAGCGTAATAAGGAGGTTTTGATTTTGATCACAAATGTCTTCAGTATCTGATTGAGCATACGACACACCTGAACCTGATTATACCATTTTTCTTTTTTGCTTTACTAGCTGTAAATTCAGTTATCGAATTACCTGCCCCAGTACAGTGTTAATAACATTGTCAACTTTCATTATCTGGGTCGCCAAGTTTGGGCGTTCATTCATTTTATGTTCATTAGTTTCAGAGCAGTTGATAGAGTATATGAAAAATAAATGAAAAGAATTGTAACTATTTTTGTCTTTGAGATTTATGGATTGCAGCTCGAAATGCTGTTGAAAGCGTTAACTGGTAGTTTGGTAGAAAGGGAGTATGAGTATGAGCATGTTGCGCAGTTCAACACTAAGCTCAATTCCCACGCGAATTTCGTGAGGTCGAATTCTGTTTGCTAGGTGTGTTAGCGAAAAAACTGCTATTTGTTAGGAGATAAAGGATGATTCCTCCAATGTGCTATCATGAATTGAGAGTTGGATGGTTTCATGGTGTCATCTAATTGGTGTAGTTTTTCATTTTGACATTCACATTTGGTAGGATGTAAGGAGTGTTGATGAATCCTGGAAATTCTACCTTAAAGGAATGTCTGATTTAGCACTACTTACTGCTCCTCATAGGAGAATGTTGAACTTGTAGTCCATTAGGCATGGTTGTGCGTTGCAATTAATTTATAGGTAAAACTTTTATATATGCGTTATATGCAATTTAAAAGCCAATGTTGAAAAATAAACCACATTGAAAATATCTTAAAATCTTATTCAAAATTAAGTTTGAAAATTCGATTTTTGGCTGTCTTTAGCTTACTAGAGCAACCAATGGGACTCTAAAAATCTTGCTTACACTTAACCATCGTTTAATTTTGCCACCTGGCCATTGATTTGTCTGTTGTTGTTGTCGTCGTCGTTTTGTGAGTGCGTGGAAAGAGGGCGGGATTGCTAATTGGCGTGCACGCGCTAGCTAACGAAGTAACGCGCGTTTGGCCCACCAGGTTCATATTTCAGCCCAGTCCGAGAAGCGGCCCATGCGTGTACGGGAGATCACGCGGTGATGAACGCTGATCTGACTGATCTTTAATCGTGAATGCTGATTTGATTTTTTTCTATTTTTGGGAGACGCGCGCATCTACCGTAATAACTCTGTTTAGTTTTAGATACGTAATTAAGAGATACGTAATTAAGGTAAGTTTTTTTTCTCTCTTTTTAAGTGTTTTTATTAACAGATTGAAAGAAATCTACCCATGAAAAAAACTTTCAAATAAAATTGAAAACTTTCTATTAAAAAATTAAAAACATACCTAAAGTTTTAAAAATTCAACTTAAAATTTGAAACTCTAAACACAAAATTTAAAAAATTACAAGGGAGAATAGCCTATTTGGTCCCTAAAGTTTCGTCTTAAGGTCAATATGGTACTTAATATTTTATTTTGTCCAATCAGATGCTTAAACTTTATCATATGGTCCAATATGAATTTTAGGCCCACCAGAAACACCATGTAGACATGCCATGTCATCATCTTATTAAAAATGGATAGTGAAATATCTAATTTGTCTATTTGCATGTGATACAAAATACTAGAACTAATTAATCTTATATGATTAGTTAATTTAATCTAATCCCAGGAATTGATATAAACACAAAATGGATTATGTTACATCTATATACGAATCGATATATTTGATTATTTGCGAATGCAAGTGTGTATGACATTTTTTCTTTTTCTTTTTTCACTCTTATGTTGTATGTAAGGGTATATTAGGCATTTCATGACAGATTTGTATAAGATGATGAGATGGCATGCCTATGTGGTGTTTTTGGGTCCAAGGACCATAGTATACTGAAAAATAGACTTTGAGGACCAATTTGAACCAATTAAAATATCAAGGACCATATTGACCTCAGAGCGAAAGTTGAAGGGCCAAATAGGCTATTATCCCAAATTACAACTTGTAATTTGAAACTTTCAACTCAAAATTTGAAAAACTTTCAATTTAAATTGGAAAACTTTCAAGTCAAGATTTTAAAACTTTCAACTCAAAATTTGAAAACTTTCAATTTAACTTGGAAAACTTTCAAGTTAATATTTGAAAACTTTCAATTTAAATTTAAAAACTTTCAACTCAAATTTGAAAATTTTCAATTTGGATTGGAAAACTTTCAAGTCAAGATTTGAAAACTTTCAACTAAAAAAATTTGAAAGCATGTATGTTGCGGATTGAAAACAAATGGAAAGAACAAGTAAAAAAGTTAAAACGTGACGAGGAGAGGGTGCGCGAAAATAG]
[+] EMBL AK063046             [  CGAGCACACATGGCCATGGGGGATGACTACTCCAAGGCGAGGCAAGCCCTGGCGGTGAGCGCCCACGAGTGCTCGCTGGTGGACGCGGTCTCCTCCGCGGCCACGCCGCCGACCGCGGACGACGGGGAGGGGCACGCGGCGGGCTTCTTCGAGGGCTTCGTGCTGGGCGGGATCCGCGTGGACAGCGTCCGCCCGGGCCTCGTCGACTGCTCCTTCACCGTCCCCTCCAGGCTCACCGATCGGAGCGGGTGCCTGGCCGCGGGCGCGGTGGTGTCGCTGGTGGACGAGGTGGGGTCGGCGGCCTCCATCGCCGACGGGCGCCCCGTCAAGGTCTCCACCGACATGTCCGTCTCCTTCGTCTCCCTCGCGCAGGCCCGCCCCGGCGACCGCCTGCGGATCACGGCCAGGGCGCTCGGCCACAAGGGGGCGTACTCCGCCACCCACGTCCTCATCTCCAACGCCGCCACCGGCGAGGTCGTCGCCGAGGGCAGGCACTCCCTCTTCGGCAGGATGAAGGTCGTCTCCACCTCCACCGCCACCGCCACCAGCAAGCTGTGACCATGGATTCCACCCTGCTGCCATGGTTAATTAAAGTGTGAGTATTATGGCCCTTCTAAGTAGCGTAATAAGGAGGTTTTGATTTTGATCACAAATGTCTTCAGTATCTGATTGAGCATACGACACACCTGAACCTGATTATACCATTTTTCTTTTTTGCTTTACTAGCTGTAAATTCAGTTATCGAATTACCTGCCCCAGTACAGTGTTAATAACATTGTCAACTTTCATTATCTGGGTCGCCAAGTTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]




>consensus_6331#0
GGCGAGCACACATGGCCATGGGGGATGACTACTCCAAGGCGAGGCAAGCCCTGGCGGTGA
GCGCCCACGAGTGCTCGCTGGTGGACGCGGTCTCCTCCGCGGCCACGCCGCCGACCGCGG
ACGACGGGGAGGGGCACGCGGCGGGCTTCTTCGAGGGCTTCGTGCTGGGCGGGATCCGCG
TGGACAGCGTCCGCCCGGGCCTCGTCGACTGCTCCTTCACCGTCCCCTCCAGGCTCACCG
ATCGGAGCGGGTGCCTGGCCGCGGGCGCGGTGGTGTCGCTGGTGGACGAGGTGGGGTCGG
CGGCCTCCATCGCCGACGGGCGCCCCGTCAAGGTCTCCACCGACATGTCCGTCTCCTTCG
TCTCCCTCGCGCAGGCCCGCCCCGGCGACCGCCTGCGGATCACGGCCAGGGCGCTCGGCC
ACAAGGGGGCGTACTCCGCCACCCACGTCCTCATCTCCAACGCCGCCACCGGCGAGGTCG
TCGCCGAGGGCAGGCACTCCCTCTTCGGCAGGATGAAGGTCGTCTCCACCTCCACCGCCA
CCGCCACCAGCAAGCTGTGACCATGGATTCCACCCTGCTGCCATGGTTAATTAAAGTGTG
AGTATTATGGCCCTTCTAAGTAGCGTAATAAGGAGGTTTTGATTTTGATCACAAATGTCT
TCAGTATCTGATTGAGCATACGACACACCTGAACCTGATTATACCATTTTTCTTTTTTGC
TTTACTAGCTGTAAATTCAGTTATCGAATTACCTGCCCCAGTACAGTGTTAATAACATTG
TCAACTTTCATTATCTGGGTCGCCAAGTTTGGGCGTTCATTCATTTTATGTTCATTAGTT
TCAGAGCAGTTGATAGAGTATATGAAAAATAAATGAAAAGAATTGTAACTATTTTTGTCT
TTGAGATTTATGGATTGCAGCTCGAAATGCTGTTGAAAGCGTTAACTGGTAGTTTGGTAG
AAAGGGAGTATGAGTATGAGCATGTTGCGCAGTTCAACACTAAGCTCAATTCCCACGCGA
ATTTCGTGAGGTCGAATTCTGTTTGCTAGGTGTGTTAGCGAAAAAACTGCTATTTGTTAG
GAGATAAAGGATGATTCCTCCAATGTGCTATCATGAATTGAGAGTTGGATGGTTTCATGG
TGTCATCTAATTGGTGTAGTTTTTCATTTTGACATTCACATTTGGTAGGATGTAAGGAGT
GTTGATGAATCCTGGAAATTCTACCTTAAAGGAATGTCTGATTTAGCACTACTTACTGCT
CCTCATAGGAGAATGTTGAACTTGTAGTCCATTAGGCATGGTTGTGCGTTGCAATTAATT
TATAGGTAAAACTTTTATATATGCGTTATATGCAATTTAAAAGCCAATGTTGAAAAATAA
ACCACATTGAAAATATCTTAAAATCTTATTCAAAATTAAGTTTGAAAATTCGATTTTTGG
CTGTCTTTAGCTTACTAGAGCAACCAATGGGACTCTAAAAATCTTGCTTACACTTAACCA
TCGTTTAATTTTGCCACCTGGCCATTGATTTGTCTGTTGTTGTTGTCGTCGTCGTTTTGT
GAGTGCGTGGAAAGAGGGCGGGATTGCTAATTGGCGTGCACGCGCTAGCTAACGAAGTAA
CGCGCGTTTGGCCCACCAGGTTCATATTTCAGCCCAGTCCGAGAAGCGGCCCATGCGTGT
ACGGGAGATCACGCGGTGATGAACGCTGATCTGACTGATCTTTAATCGTGAATGCTGATT
TGATTTTTTTCTATTTTTGGGAGACGCGCGCATCTACCGTAATAACTCTGTTTAGTTTTA
GATACGTAATTAAGAGATACGTAATTAAGGTAAGTTTTTTTTCTCTCTTTTTAAGTGTTT
TTATTAACAGATTGAAAGAAATCTACCCATGAAAAAAACTTTCAAATAAAATTGAAAACT
TTCTATTAAAAAATTAAAAACATACCTAAAGTTTTAAAAATTCAACTTAAAATTTGAAAC
TCTAAACACAAAATTTAAAAAATTACAAGGGAGAATAGCCTATTTGGTCCCTAAAGTTTC
GTCTTAAGGTCAATATGGTACTTAATATTTTATTTTGTCCAATCAGATGCTTAAACTTTA
TCATATGGTCCAATATGAATTTTAGGCCCACCAGAAACACCATGTAGACATGCCATGTCA
TCATCTTATTAAAAATGGATAGTGAAATATCTAATTTGTCTATTTGCATGTGATACAAAA
TACTAGAACTAATTAATCTTATATGATTAGTTAATTTAATCTAATCCCAGGAATTGATAT
AAACACAAAATGGATTATGTTACATCTATATACGAATCGATATATTTGATTATTTGCGAA
TGCAAGTGTGTATGACATTTTTTCTTTTTCTTTTTTCACTCTTATGTTGTATGTAAGGGT
ATATTAGGCATTTCATGACAGATTTGTATAAGATGATGAGATGGCATGCCTATGTGGTGT
TTTTGGGTCCAAGGACCATAGTATACTGAAAAATAGACTTTGAGGACCAATTTGAACCAA
TTAAAATATCAAGGACCATATTGACCTCAGAGCGAAAGTTGAAGGGCCAAATAGGCTATT
ATCCCAAATTACAACTTGTAATTTGAAACTTTCAACTCAAAATTTGAAAAACTTTCAATT
TAAATTGGAAAACTTTCAAGTCAAGATTTTAAAACTTTCAACTCAAAATTTGAAAACTTT
CAATTTAACTTGGAAAACTTTCAAGTTAATATTTGAAAACTTTCAATTTAAATTTAAAAA
CTTTCAACTCAAATTTGAAAATTTTCAATTTGGATTGGAAAACTTTCAAGTCAAGATTTG
AAAACTTTCAACTAAAAAAATTTGAAAGCATGTATGTTGCGGATTGAAAACAAATGGAAA
GAACAAGTAAAAAAGTTAAAACGTGACGAGGAGAGGGTGCGCGAAAATAG

consensusID : consensus_6331#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 386
fasta sequence 
                              [CTTTGACNGCTCCCTTCTTCTACCTCCTCTACTGTATCCAGTGCTGCTGAAGGCGAGGCGAGCACACATGGCCATGGGGGATGACTACTCCAAGGCGAGGCAAGCCCTGGCGGTGAGCGCCCACGAGTGCTCGCTGGTGGACGCGGTCTCCTCCGCGGCCACGCCGCCGACCGCGGACGACGGGGAGGGGCACGCGGCGGGCTTCTTCGAGGGCTTCGTGCTGGGCGGGATCCGCGTGGACAGCGTCCGCCCGGGCCTCGTCGATAAATCCTTTCAACGTCCCCTTCCAAGCTCAACGTGAGTAGCCGCCGGCCTATTCTTCCCCTGATCTAACGATTTTTGGATTCGAGATAAGTAAATCCGAATTTGGGCGANGATCNGAACGG]

[+] EMBL C98788               [CTTTGACNGCTCCCTTCTTCTACCTCCTCTACTGTATCCAGTGCTGCTGAAGGCGAGGCGAGCACACATGGCCATGGGGGATGACTACTCCAAGGCGAGGCAAGCCCTGGCGGTGAGCGCCCACGAGTGCTCGCTGGTGGACGCGGTCTCCTCCGCGGCCACGCCGCCGACCGCGGACGACGGGGAGGGGCACGCGGCGGGCTTCTTCGAGGGCTTCGTGCTGGGCGGGATCCGCGTGGACAGCGTCCGCCCGGGCCTCGTCGATAAATCCTTTCAACGTCCCCTTCCAAGCTCAACGTGAGTAGCCGCCGGCCTATTCTTCCCCTGATCTAACGATTTTTGGATTCGAGATAAGTAAATCCGAATTTGGGCGANGATCNGAACGG]




>consensus_6331#1
CTTTGACNGCTCCCTTCTTCTACCTCCTCTACTGTATCCAGTGCTGCTGAAGGCGAGGCG
AGCACACATGGCCATGGGGGATGACTACTCCAAGGCGAGGCAAGCCCTGGCGGTGAGCGC
CCACGAGTGCTCGCTGGTGGACGCGGTCTCCTCCGCGGCCACGCCGCCGACCGCGGACGA
CGGGGAGGGGCACGCGGCGGGCTTCTTCGAGGGCTTCGTGCTGGGCGGGATCCGCGTGGA
CAGCGTCCGCCCGGGCCTCGTCGATAAATCCTTTCAACGTCCCCTTCCAAGCTCAACGTG
AGTAGCCGCCGGCCTATTCTTCCCCTGATCTAACGATTTTTGGATTCGAGATAAGTAAAT
CCGAATTTGGGCGANGATCNGAACGG

consensusID : consensus_6331#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 322
fasta sequence 
                              [CCTGCTGCCATGGTTNATTAAAGTGTGAGTATTATGGCCCTTCTAAGTAGCGTAATAAGGNGGTTTTGATTTTGATCACAAATGTCTTCAGTATCTGATTGAGCATACGACACACCTGAACCTGATTATACCATTTTTCTTTTTTGCTTTACTAGCTGTAAATTCNGTTATCGAATTACCTGCCCCAGTACAGTGTTAATAACATTGTCAACTTTCATTATCTGGGTCGCCAAGTTTGGGCGTTCATTCATTTTATGTTCATTAGTTTCAGAGCAGTTGATAGNGTATATGAAAAATAAATGAAAAGNNTTNTGNNTAAAAA]

[+] EMBL C98789               [CCTGCTGCCATGGTTNATTAAAGTGTGAGTATTATGGCCCTTCTAAGTAGCGTAATAAGGNGGTTTTGATTTTGATCACAAATGTCTTCAGTATCTGATTGAGCATACGACACACCTGAACCTGATTATACCATTTTTCTTTTTTGCTTTACTAGCTGTAAATTCNGTTATCGAATTACCTGCCCCAGTACAGTGTTAATAACATTGTCAACTTTCATTATCTGGGTCGCCAAGTTTGGGCGTTCATTCATTTTATGTTCATTAGTTTCAGAGCAGTTGATAGNGTATATGAAAAATAAATGAAAAGNNTTNTGNNTAAAAA]




>consensus_6331#2
CCTGCTGCCATGGTTNATTAAAGTGTGAGTATTATGGCCCTTCTAAGTAGCGTAATAAGG
NGGTTTTGATTTTGATCACAAATGTCTTCAGTATCTGATTGAGCATACGACACACCTGAA
CCTGATTATACCATTTTTCTTTTTTGCTTTACTAGCTGTAAATTCNGTTATCGAATTACC
TGCCCCAGTACAGTGTTAATAACATTGTCAACTTTCATTATCTGGGTCGCCAAGTTTGGG
CGTTCATTCATTTTATGTTCATTAGTTTCAGAGCAGTTGATAGNGTATATGAAAAATAAA
TGAAAAGNNTTNTGNNTAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6331#0      GGCGAGCACACATGGCCATGGGGGATGACTACTCCAAGGCGAGGCAAGCCCTGGCGGTGA 60
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      GCGCCCACGAGTGCTCGCTGGTGGACGCGGTCTCCTCCGCGGCCACGCCGCCGACCGCGG 120
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      ACGACGGGGAGGGGCACGCGGCGGGCTTCTTCGAGGGCTTCGTGCTGGGCGGGATCCGCG 180
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TGGACAGCGTCCGCCCGGGCCTCGTCGACTGCTCCTTCACCGTCCCCTCCAGGCTCACCG 240
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      ATCGGAGCGGGTGCCTGGCCGCGGGCGCGGTGGTGTCGCTGGTGGACGAGGTGGGGTCGG 300
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      CGGCCTCCATCGCCGACGGGCGCCCCGTCAAGGTCTCCACCGACATGTCCGTCTCCTTCG 360
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TCTCCCTCGCGCAGGCCCGCCCCGGCGACCGCCTGCGGATCACGGCCAGGGCGCTCGGCC 420
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      ACAAGGGGGCGTACTCCGCCACCCACGTCCTCATCTCCAACGCCGCCACCGGCGAGGTCG 480
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TCGCCGAGGGCAGGCACTCCCTCTTCGGCAGGATGAAGGTCGTCTCCACCTCCACCGCCA 540
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      -----------------------------CTTTGACNGCTCCCTTCTTCTACCTCCTCTA 31
                                                                                  

consensus_6331#0      CCGCCACCAGCAAGCTGTGACCATGGATTCCACCCTGCTGCCATGGTTAATTAAAGTGTG 600
consensus_6331#2      ---------------------------------CCTGCTGCCATGGTTNATTAAAGTGTG 27
consensus_6331#1      CTGTATCCAGTGCTGCTGAAGGCGAGGCGAGCACACATGGCCATGGGGGATGACTACTCC 91
                                                       *     *******   ** *       

consensus_6331#0      AGTATTATG---GCCCTTCTAAGTAGCGTAATAAGGAGGTTTTGATTTTGATCACAAATG 657
consensus_6331#2      AGTATTATG---GCCCTTCTAAGTAGCGTAATAAGGNGGTTTTGATTTTGATCACAAATG 84
consensus_6331#1      AAGGCGAGGCAAGCCCTGGCGGTGAGCGC--CCACGAGTGCTCGCTGGTGGACGCGGTCT 149
                      *     * *   *****       ****     * * *   * * *  **  * *     

consensus_6331#0      TCTTCAGTATCTGATTGAGCAT-ACGACACACCTGAACCTGATTATACCATTTTTCTTTT 716
consensus_6331#2      TCTTCAGTATCTGATTGAGCAT-ACGACACACCTGAACCTGATTATACCATTTTTCTTTT 143
consensus_6331#1      CCTCCGCGGCCACGCCGCCGACCGCGGACGACGGGGAGGGGCACGCGGCGGGCTTCTTCG 209
                       ** *     *     *   *   **    **  * *   *       *    *****  

consensus_6331#0      TTGCTTTACTAGCTGTAAATTCAGTTATCGAATTACCTGCCCCAGTACAGTGTTAATAA- 775
consensus_6331#2      TTGCTTTACTAGCTGTAAATTCNGTTATCGAATTACCTGCCCCAGTACAGTGTTAATAA- 202
consensus_6331#1      AGGGCTTCGT-GCTGGGCGGGATCCGCGTGGACAGCGTCCGCCCGGGCCTCGTCGATAAA 268
                        *  **  * ****              * *   * * * ** *  *   **  **** 

consensus_6331#0      CATTGTCAACTTTCATTATCTGGGTCGCCAAGTTTGGGCGTTCATTCATTTTATGTTCAT 835
consensus_6331#2      CATTGTCAACTTTCATTATCTGGGTCGCCAAGTTTGGGCGTTCATTCATTTTATGTTCAT 262
consensus_6331#1      TCCTTTCAACGTCCCCTTCCAAGCTCAACGTGAGTAGCCGCCGGCCTATTCT---TCCCC 325
                         * ***** * *  *  *  * **  *  *  * * **       *** *   * *  

consensus_6331#0      TAGTTTCAGAGCAGTTGATAGAGTATATGAAAAATAAATGAAAA---GAATTGTAACTAT 892
consensus_6331#2      TAGTTTCAGAGCAGTTGATAGNGTATATGAAAAATAAATGAAAA---GNNTTNTGNNTAA 319
consensus_6331#1      TGATCT---AACGATTTTTGGA-TTCGAGATAAGTAAATCCGAATTTGGGCGANGATCNG 381
                      *  * *   * *  **  * *  *    ** ** *****   **   *            

consensus_6331#0      TTTTGTCTTTGAGATTTATGGATTGCAGCTCGAAATGCTGTTGAAAGCGTTAACTGGTAG 952
consensus_6331#2      AAA--------------------------------------------------------- 322
consensus_6331#1      AACGG------------------------------------------------------- 386
                                                                                  

consensus_6331#0      TTTGGTAGAAAGGGAGTATGAGTATGAGCATGTTGCGCAGTTCAACACTAAGCTCAATTC 1012
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      CCACGCGAATTTCGTGAGGTCGAATTCTGTTTGCTAGGTGTGTTAGCGAAAAAACTGCTA 1072
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TTTGTTAGGAGATAAAGGATGATTCCTCCAATGTGCTATCATGAATTGAGAGTTGGATGG 1132
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TTTCATGGTGTCATCTAATTGGTGTAGTTTTTCATTTTGACATTCACATTTGGTAGGATG 1192
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TAAGGAGTGTTGATGAATCCTGGAAATTCTACCTTAAAGGAATGTCTGATTTAGCACTAC 1252
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TTACTGCTCCTCATAGGAGAATGTTGAACTTGTAGTCCATTAGGCATGGTTGTGCGTTGC 1312
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      AATTAATTTATAGGTAAAACTTTTATATATGCGTTATATGCAATTTAAAAGCCAATGTTG 1372
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      AAAAATAAACCACATTGAAAATATCTTAAAATCTTATTCAAAATTAAGTTTGAAAATTCG 1432
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      ATTTTTGGCTGTCTTTAGCTTACTAGAGCAACCAATGGGACTCTAAAAATCTTGCTTACA 1492
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      CTTAACCATCGTTTAATTTTGCCACCTGGCCATTGATTTGTCTGTTGTTGTTGTCGTCGT 1552
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      CGTTTTGTGAGTGCGTGGAAAGAGGGCGGGATTGCTAATTGGCGTGCACGCGCTAGCTAA 1612
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      CGAAGTAACGCGCGTTTGGCCCACCAGGTTCATATTTCAGCCCAGTCCGAGAAGCGGCCC 1672
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      ATGCGTGTACGGGAGATCACGCGGTGATGAACGCTGATCTGACTGATCTTTAATCGTGAA 1732
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TGCTGATTTGATTTTTTTCTATTTTTGGGAGACGCGCGCATCTACCGTAATAACTCTGTT 1792
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TAGTTTTAGATACGTAATTAAGAGATACGTAATTAAGGTAAGTTTTTTTTCTCTCTTTTT 1852
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      AAGTGTTTTTATTAACAGATTGAAAGAAATCTACCCATGAAAAAAACTTTCAAATAAAAT 1912
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TGAAAACTTTCTATTAAAAAATTAAAAACATACCTAAAGTTTTAAAAATTCAACTTAAAA 1972
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TTTGAAACTCTAAACACAAAATTTAAAAAATTACAAGGGAGAATAGCCTATTTGGTCCCT 2032
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      AAAGTTTCGTCTTAAGGTCAATATGGTACTTAATATTTTATTTTGTCCAATCAGATGCTT 2092
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      AAACTTTATCATATGGTCCAATATGAATTTTAGGCCCACCAGAAACACCATGTAGACATG 2152
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      CCATGTCATCATCTTATTAAAAATGGATAGTGAAATATCTAATTTGTCTATTTGCATGTG 2212
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      ATACAAAATACTAGAACTAATTAATCTTATATGATTAGTTAATTTAATCTAATCCCAGGA 2272
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      ATTGATATAAACACAAAATGGATTATGTTACATCTATATACGAATCGATATATTTGATTA 2332
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TTTGCGAATGCAAGTGTGTATGACATTTTTTCTTTTTCTTTTTTCACTCTTATGTTGTAT 2392
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      GTAAGGGTATATTAGGCATTTCATGACAGATTTGTATAAGATGATGAGATGGCATGCCTA 2452
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TGTGGTGTTTTTGGGTCCAAGGACCATAGTATACTGAAAAATAGACTTTGAGGACCAATT 2512
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TGAACCAATTAAAATATCAAGGACCATATTGACCTCAGAGCGAAAGTTGAAGGGCCAAAT 2572
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      AGGCTATTATCCCAAATTACAACTTGTAATTTGAAACTTTCAACTCAAAATTTGAAAAAC 2632
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TTTCAATTTAAATTGGAAAACTTTCAAGTCAAGATTTTAAAACTTTCAACTCAAAATTTG 2692
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      AAAACTTTCAATTTAACTTGGAAAACTTTCAAGTTAATATTTGAAAACTTTCAATTTAAA 2752
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      TTTAAAAACTTTCAACTCAAATTTGAAAATTTTCAATTTGGATTGGAAAACTTTCAAGTC 2812
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      AAGATTTGAAAACTTTCAACTAAAAAAATTTGAAAGCATGTATGTTGCGGATTGAAAACA 2872
consensus_6331#2      ------------------------------------------------------------
consensus_6331#1      ------------------------------------------------------------
                                                                                  

consensus_6331#0      AATGGAAAGAACAAGTAAAAAAGTTAAAACGTGACGAGGAGAGGGTGCGCGAAAATAG 2930
consensus_6331#2      ----------------------------------------------------------
consensus_6331#1      ----------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)