Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6334 cluster # 6334       Sequences # 4       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6334#0 length = 1131 sequences # 1  
consensus_6334#1 length = 818 sequences # 1  
consensus_6334#2 length = 609 sequences # 1  
consensus_6334#3 length = 583 sequences # 1  

consensusID : consensus_6334#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1131
fasta sequence
                              [CAGCCCACGGTTTCGTGACCGTGGACGGGGGCCCAATTGGAAACCCTTCGATGGAGTCGTCGTCGTCGGCGGCGGCGGCCGTCGACGGAGAGGACGGAGGGGGCAGCAAGCGCAGCTGGTACGCGGTGGGGGAGCGGGCGGTGCTGGTGCCGTACCTGCGGGAGCACGTGCCGCGGTACCACGGGTGGATGAAGGATCCGGCGCTTCTGGAGGCCACCGCGTCGGAGCCCCTCTCCCTCGACCAGGAGTTCGACGTCCACCGCTCCTGGACCCTCGACCCGCTCAAGCATACGTTCATGGTGCTGGACAAGGACCTGATCGAGGGAGGGTTCGCGGTTGGCGATCCACACACTGAAGCGATGGTTGGTGATGTAAACATCTATATGAATGATCCTGATGATTTGCAACTTGCAGAGATAGAGATTATGATTGCTGAACACAAGAGTACCTTTTGTTACAGCCGCGGAAAGGGACTTGGTCAAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATTCACACTTTCAGAGCAAAAGTTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAATTGGGCTTCAAGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCACTACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTTCCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACTTGTGTAGGCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGATGGTGTGATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAGATTTTCAACCACAAGGTGTGGAACAGGTTGCAGTAATCTCTAGAAAGTTTATGAAGGCGATGCATTGCTCACACTGTATACATATACATCGTTATCATGCATGGCACGAGAACACTTTTCAGTTAGCCAGAAATTTGTGTGCATTCGATTCGAGATCTGTAACTTGTACTGGTAGTAACTTGTAAGCCAGAAATGCC]

[+] EMBL AK103687             [CAGCCCACGGTTTCGTGACCGTGGACGGGGGCCCAATTGGAAACCCTTCGATGGAGTCGTCGTCGTCGGCGGCGGCGGCCGTCGACGGAGAGGACGGAGGGGGCAGCAAGCGCAGCTGGTACGCGGTGGGGGAGCGGGCGGTGCTGGTGCCGTACCTGCGGGAGCACGTGCCGCGGTACCACGGGTGGATGAAGGATCCGGCGCTTCTGGAGGCCACCGCGTCGGAGCCCCTCTCCCTCGACCAGGAGTTCGACGTCCACCGCTCCTGGACCCTCGACCCGCTCAAGCATACGTTCATGGTGCTGGACAAGGACCTGATCGAGGGAGGGTTCGCGGTTGGCGATCCACACACTGAAGCGATGGTTGGTGATGTAAACATCTATATGAATGATCCTGATGATTTGCAACTTGCAGAGATAGAGATTATGATTGCTGAACACAAGAGTACCTTTTGTTACAGCCGCGGAAAGGGACTTGGTCAAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATTCACACTTTCAGAGCAAAAGTTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAATTGGGCTTCAAGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCACTACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTTCCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACTTGTGTAGGCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGATGGTGTGATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAGATTTTCAACCACAAGGTGTGGAACAGGTTGCAGTAATCTCTAGAAAGTTTATGAAGGCGATGCATTGCTCACACTGTATACATATACATCGTTATCATGCATGGCACGAGAACACTTTTCAGTTAGCCAGAAATTTGTGTGCATTCGATTCGAGATCTGTAACTTGTACTGGTAGTAACTTGTAAGCCAGAAATGCC]


>consensus_6334#0 CAGCCCACGGTTTCGTGACCGTGGACGGGGGCCCAATTGGAAACCCTTCGATGGAGTCGT CGTCGTCGGCGGCGGCGGCCGTCGACGGAGAGGACGGAGGGGGCAGCAAGCGCAGCTGGT ACGCGGTGGGGGAGCGGGCGGTGCTGGTGCCGTACCTGCGGGAGCACGTGCCGCGGTACC ACGGGTGGATGAAGGATCCGGCGCTTCTGGAGGCCACCGCGTCGGAGCCCCTCTCCCTCG ACCAGGAGTTCGACGTCCACCGCTCCTGGACCCTCGACCCGCTCAAGCATACGTTCATGG TGCTGGACAAGGACCTGATCGAGGGAGGGTTCGCGGTTGGCGATCCACACACTGAAGCGA TGGTTGGTGATGTAAACATCTATATGAATGATCCTGATGATTTGCAACTTGCAGAGATAG AGATTATGATTGCTGAACACAAGAGTACCTTTTGTTACAGCCGCGGAAAGGGACTTGGTC AAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATTCACACTTTCA GAGCAAAAGTTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAATTGGGCTTCA AGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCAC TACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATT TCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTTCCATGCT AAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACTTGTGTAG GCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGATGGTGTGATGTTGTATA TGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAGATTTTCAACCACAAGGTGTGGAACAG GTTGCAGTAATCTCTAGAAAGTTTATGAAGGCGATGCATTGCTCACACTGTATACATATA CATCGTTATCATGCATGGCACGAGAACACTTTTCAGTTAGCCAGAAATTTGTGTGCATTC GATTCGAGATCTGTAACTTGTACTGGTAGTAACTTGTAAGCCAGAAATGCC



consensusID : consensus_6334#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 818
fasta sequence
                              [ACAAGGGACTTGGTCAAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATTCACACTTTCAGAGCAAAAATTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAATTGGGCTTCAAGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCACTACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTTCCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACTTGTGTAGGCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGATGGTGTGATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAAATTTTCAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNAAAAANAAAAANNNNNNNANNNNNNNNNNNNNAAAAAANAANNNNGGGCCCCCCCNCCGGGAAAAAANNAAGCACTCAGCACCCCTAAACGAAAAAAAAATGCGCTCTTAGANGCAATAATGATCCAAACTGCTTCCCGCATAAAAGAGAAAACCGGTTCCCCGGTTCACAACCGAAGCACCCAAAAGCTGTAAAGTGAAAGCTGTGAGTTGCCAAGGACTCTAGCCACTTCCCTACCCTTGGATTATTGATACGGCCAACTGCCCAGTAAAGAAACACAAAACCTTATTGGCTTT]

[+] EMBL CA765663             [ACAAGGGACTTGGTCAAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATTCACACTTTCAGAGCAAAAATTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAATTGGGCTTCAAGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCACTACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTTCCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACTTGTGTAGGCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGATGGTGTGATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAAATTTTCAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNAAAAANAAAAANNNNNNNANNNNNNNNNNNNNAAAAAANAANNNNGGGCCCCCCCNCCGGGAAAAAANNAAGCACTCAGCACCCCTAAACGAAAAAAAAATGCGCTCTTAGANGCAATAATGATCCAAACTGCTTCCCGCATAAAAGAGAAAACCGGTTCCCCGGTTCACAACCGAAGCACCCAAAAGCTGTAAAGTGAAAGCTGTGAGTTGCCAAGGACTCTAGCCACTTCCCTACCCTTGGATTATTGATACGGCCAACTGCCCAGTAAAGAAACACAAAACCTTATTGGCTTT]


>consensus_6334#1 ACAAGGGACTTGGTCAAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATG GAATTCACACTTTCAGAGCAAAAATTAACGAATCAAATACAGCATCCTTAAAGCTGTTCA GAAAATTGGGCTTCAAGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGG CACCCGCAACTGCACTACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGA GTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTA ACTGCGTTCCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAG AATAAACTTGTGTAGGCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGATG GTGTGATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAAATTTTCAACCA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNAAAAANAAAAANNNNNNN ANNNNNNNNNNNNNAAAAAANAANNNNGGGCCCCCCCNCCGGGAAAAAANNAAGCACTCA GCACCCCTAAACGAAAAAAAAATGCGCTCTTAGANGCAATAATGATCCAAACTGCTTCCC GCATAAAAGAGAAAACCGGTTCCCCGGTTCACAACCGAAGCACCCAAAAGCTGTAAAGTG AAAGCTGTGAGTTGCCAAGGACTCTAGCCACTTCCCTACCCTTGGATTATTGATACGGCC AACTGCCCAGTAAAGAAACACAAAACCTTATTGGCTTT



consensusID : consensus_6334#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 609
fasta sequence
                              [CCGNTGATTCCAACTCNCGNGNTNGGNGATTNTGATTGCTGACCCAAGTCCCCCGGAAAGGGCCTTGGTNCAGGATCCATTTTATCCATGGTTGGCCNTTGCNGTAGNGGANANTTTGNAATCCCACTTTCAGGGCAAAAATTACCCGAATCCAATTCCGGCATCCTTAAAGCTGTTCAGAAAATNGGGCTTTCAAGGATGCTTCGTATAGTTCAGTGTTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCACTACCATTGGTTTCCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTNCCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACTTGTGTAGGCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGATGGTGTGATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAGATTTTCAACCACAAGGTGTGGAACAGGTTGCAGTAATCTCTAGAAAGTTTATGAAGGCGATGCATTGCTCAAAAAAAA]

[+] EMBL C98370               [CCGNTGATTCCAACTCNCGNGNTNGGNGATTNTGATTGCTGACCCAAGTCCCCCGGAAAGGGCCTTGGTNCAGGATCCATTTTATCCATGGTTGGCCNTTGCNGTAGNGGANANTTTGNAATCCCACTTTCAGGGCAAAAATTACCCGAATCCAATTCCGGCATCCTTAAAGCTGTTCAGAAAATNGGGCTTTCAAGGATGCTTCGTATAGTTCAGTGTTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCACTACCATTGGTTTCCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTNCCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACTTGTGTAGGCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGATGGTGTGATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAGATTTTCAACCACAAGGTGTGGAACAGGTTGCAGTAATCTCTAGAAAGTTTATGAAGGCGATGCATTGCTCAAAAAAAA]


>consensus_6334#2 CCGNTGATTCCAACTCNCGNGNTNGGNGATTNTGATTGCTGACCCAAGTCCCCCGGAAAG GGCCTTGGTNCAGGATCCATTTTATCCATGGTTGGCCNTTGCNGTAGNGGANANTTTGNA ATCCCACTTTCAGGGCAAAAATTACCCGAATCCAATTCCGGCATCCTTAAAGCTGTTCAG AAAATNGGGCTTTCAAGGATGCTTCGTATAGTTCAGTGTTTTAAGGAGGTGACACTGGAG GCACCCGCAACTGCACTACCATTGGTTTCCTCCTCTGACCATAGGAAACTGGTGACATCT GAGTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAAC TAACTGCGTNCCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATT AGAATAAACTTGTGTAGGCTTCTCGACTGCAACGTGATGCTGAACGGTTTGAACTTTTGA TGGTGTGATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAGATTTTCAAC CACAAGGTGTGGAACAGGTTGCAGTAATCTCTAGAAAGTTTATGAAGGCGATGCATTGCT CAAAAAAAA



consensusID : consensus_6334#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 583
fasta sequence
                              [AACTTGCAGAGATAGAGATTATGATTGCTGAACACAAGAGCCGCGGAAAGGGACTTGGTCAAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATTCACACTTTCAGAGCAAAAATTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAATTGGGCTTCAAGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCACTACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTTCCATGCTAAACTGANTACTGTATTATCTGCCCAACAATTTGCTGGGATTAGAATAAACTTGTGTANGGCTTCTCGACTGCAACGTGATGCTGGAACGGTTTGGAACTTTTGATGGTGTGATGTGGNAATGTAGGGAGCTANCCGTGAGGTTTTNCAGGANGTTTTCCACCACAAGGGTGGAANANGGTNCAGTATCCCNNNAAAGTTATGAGGGGTGCATTGNCCAAAAA]

[+] EMBL C98369               [AACTTGCAGAGATAGAGATTATGATTGCTGAACACAAGAGCCGCGGAAAGGGACTTGGTCAAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATTCACACTTTCAGAGCAAAAATTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAATTGGGCTTCAAGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCACTACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTTCCATGCTAAACTGANTACTGTATTATCTGCCCAACAATTTGCTGGGATTAGAATAAACTTGTGTANGGCTTCTCGACTGCAACGTGATGCTGGAACGGTTTGGAACTTTTGATGGTGTGATGTGGNAATGTAGGGAGCTANCCGTGAGGTTTTNCAGGANGTTTTCCACCACAAGGGTGGAANANGGTNCAGTATCCCNNNAAAGTTATGAGGGGTGCATTGNCCAAAAA]


>consensus_6334#3 AACTTGCAGAGATAGAGATTATGATTGCTGAACACAAGAGCCGCGGAAAGGGACTTGGTC AAGAAGCAATATTAATCATGATGGCATTTGCAGTAGAGAAATATGGAATTCACACTTTCA GAGCAAAAATTAACGAATCAAATACAGCATCCTTAAAGCTGTTCAGAAAATTGGGCTTCA AGGATGCTTCGTATAGTTCAGTGTTTAAGGAGGTGACACTGGAGGCACCCGCAACTGCAC TACCATTGGTTTCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGACTAAATT TCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTTCCATGCT AAACTGANTACTGTATTATCTGCCCAACAATTTGCTGGGATTAGAATAAACTTGTGTANG GCTTCTCGACTGCAACGTGATGCTGGAACGGTTTGGAACTTTTGATGGTGTGATGTGGNA ATGTAGGGAGCTANCCGTGAGGTTTTNCAGGANGTTTTCCACCACAAGGGTGGAANANGG TNCAGTATCCCNNNAAAGTTATGAGGGGTGCATTGNCCAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6334#0      CAGCCCACGGTTTCGTGACCGTGGACGGGGGCCCAATTGGAAACCCTTCGATGGAGTCGT 60
consensus_6334#2      ------------------------------------------------------------
consensus_6334#3      ------------------------------------------------------------
consensus_6334#1      ------------------------------------------------------------
                                                                                  

consensus_6334#0      CGTCGTCGGCGGCGGCGGCCGTCGACGGAGAGGACGGAGGGGGCAGCAAGCGCAGCTGGT 120
consensus_6334#2      ------------------------------------------------------------
consensus_6334#3      ------------------------------------------------------------
consensus_6334#1      ------------------------------------------------------------
                                                                                  

consensus_6334#0      ACGCGGTGGGGGAGCGGGCGGTGCTGGTGCCGTACCTGCGGGAGCACGTGCCGCGGTACC 180
consensus_6334#2      ------------------------------------------------------------
consensus_6334#3      ------------------------------------------------------------
consensus_6334#1      ------------------------------------------------------------
                                                                                  

consensus_6334#0      ACGGGTGGATGAAGGATCCGGCGCTTCTGGAGGCCACCGCGTCGGAGCCCCTCTCCCTCG 240
consensus_6334#2      ------------------------------------------------------------
consensus_6334#3      ------------------------------------------------------------
consensus_6334#1      ------------------------------------------------------------
                                                                                  

consensus_6334#0      ACCAGGAGTTCGACGTCCACCGCTCCTGGACCCTCGACCCGCTCAAGCATACGTTCATGG 300
consensus_6334#2      ------------------------------------------------------------
consensus_6334#3      ------------------------------------------------------------
consensus_6334#1      ------------------------------------------------------------
                                                                                  

consensus_6334#0      TGCTGGACAAGGACCTGATCGAGGGAGGGTTCGCGGTTGGCGATCCACACACTGAAGCGA 360
consensus_6334#2      ------------------------------------------------------------
consensus_6334#3      ------------------------------------------------------------
consensus_6334#1      ------------------------------------------------------------
                                                                                  

consensus_6334#0      TGGTTGGTGATGTAAACATCTATATGAATGATCCTGATGATTTGCAACTTGCAGAGATAG 420
consensus_6334#2      ---------------------------------CCGNTGATTC-CAACTCNCGNGNTNGG 26
consensus_6334#3      ---------------------------------------------AACTTGCAGAGATAG 15
consensus_6334#1      ------------------------------------------------------------
                                                                                  

consensus_6334#0      AGATTATGATTGCTGAACACAAGAGTACCTTTTGTTACAGCCGCGGAAAGGGACTTGGTC 480
consensus_6334#2      NGATTNTGATTGCTGA-CCCAAG---------------TCCCCCGGAAAGGGCCTTGGTN 70
consensus_6334#3      AGATTATGATTGCTGAACACAAG---------------AGCCGCGGAAAGGGACTTGGTC 60
consensus_6334#1      ---------------------------------------------ACAAGGGACTTGGTC 15
                                                                     ***** ****** 

consensus_6334#0      AAGAAGCAATATTAATCATGAT-GGCATTTGCAGTAGAG-AAATATGGAATTCACACTTT 538
consensus_6334#2      CAGGATCCATTTTATCCATGGTTGGCCNTTGCNGTAGNGGANANTTTGNAATCCCACTTT 130
consensus_6334#3      AAGAAGCAATATTAATCATGAT-GGCATTTGCAGTAGAG-AAATATGGAATTCACACTTT 118
consensus_6334#1      AAGAAGCAATATTAATCATGAT-GGCATTTGCAGTAGAG-AAATATGGAATTCACACTTT 73
                       ** * * ** ***  **** * ***  **** **** * * *  * * * ** ******

consensus_6334#0      CAGAGCAAAAGTTAAC-GAATCAAATAC-AGCATCCTTAAAGCTGTTCAGAAAATTGGGC 596
consensus_6334#2      CAGGGCAAAAATTACCCGAATCCAATTCCGGCATCCTTAAAGCTGTTCAGAAAATNGGGC 190
consensus_6334#3      CAGAGCAAAAATTAAC-GAATCAAATAC-AGCATCCTTAAAGCTGTTCAGAAAATTGGGC 176
consensus_6334#1      CAGAGCAAAAATTAAC-GAATCAAATAC-AGCATCCTTAAAGCTGTTCAGAAAATTGGGC 131
                      *** ****** *** * ***** *** *  ************************* ****

consensus_6334#0      TT-CAAGGATGCTTCGTATAGTTCAGTGTTT-AAGGAGGTGACACTGGAGGCACCCGCAA 654
consensus_6334#2      TTTCAAGGATGCTTCGTATAGTTCAGTGTTTTAAGGAGGTGACACTGGAGGCACCCGCAA 250
consensus_6334#3      TT-CAAGGATGCTTCGTATAGTTCAGTGTTT-AAGGAGGTGACACTGGAGGCACCCGCAA 234
consensus_6334#1      TT-CAAGGATGCTTCGTATAGTTCAGTGTTT-AAGGAGGTGACACTGGAGGCACCCGCAA 189
                      ** **************************** ****************************

consensus_6334#0      CTGCACTACCATTGGTTTC-TCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGA 713
consensus_6334#2      CTGCACTACCATTGGTTTCCTCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGA 310
consensus_6334#3      CTGCACTACCATTGGTTTC-TCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGA 293
consensus_6334#1      CTGCACTACCATTGGTTTC-TCCTCTGACCATAGGAAACTGGTGACATCTGAGTATCTGA 248
                      ******************* ****************************************

consensus_6334#0      CTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTT 773
consensus_6334#2      CTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTN 370
consensus_6334#3      CTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTT 353
consensus_6334#1      CTAAATTTCCGAAGCAGTTATTGGTGTTCCTCAACTGGGAAACAGGAAACTAACTGCGTT 308
                      *********************************************************** 

consensus_6334#0      CCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACT 833
consensus_6334#2      CCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACT 430
consensus_6334#3      CCATGCTAAACTGANTACTGTATTATCTGCCCAACAATTTGCT-GGGATTAGAATAAACT 412
consensus_6334#1      CCATGCTAAACTGACTACTGTATTATCTGCCCAACAATTTGCTTGGGATTAGAATAAACT 368
                      ************** **************************** ****************

consensus_6334#0      TGTGTAGG-CTTCTCGACTGCAACGTGATGCTG-AACGGTTTG-AACTTTTGATGGTGTG 890
consensus_6334#2      TGTGTAGG-CTTCTCGACTGCAACGTGATGCTG-AACGGTTTG-AACTTTTGATGGTGTG 487
consensus_6334#3      TGTGTANGGCTTCTCGACTGCAACGTGATGCTGGAACGGTTTGGAACTTTTGATGGTGTG 472
consensus_6334#1      TGTGTAGG-CTTCTCGACTGCAACGTGATGCTG-AACGGTTTG-AACTTTTGATGGTGTG 425
                      ****** * ************************ ********* ****************

consensus_6334#0      ATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAGATTTTCAACCACAAGG 950
consensus_6334#2      ATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAGATTTTCAACCACAAGG 547
consensus_6334#3      ATGTGGNA-ATGTAGGGAGCTANCCGTGAGGTTTTNCAGGAN--GTTTTCCACCACAAGG 529
consensus_6334#1      ATGTTGTATATGTAGGGAGCTACCCGTGATGTTTTTCAAGAGAAATTTTCAACCAAAAAA 485
                      **** * * ************* ****** ***** ** **    ***** **** **  

consensus_6334#0      TGTGGAACAGGTTGCAGTAA----------TCTCTAGAAAGTTTATGAAGGCGATGCATT 1000
consensus_6334#2      TGTGGAACAGGTTGCAGTAA----------TCTCTAGAAAGTTTATGAAGGCGATGCATT 597
consensus_6334#3      -GTGGAANANGGTNCAGTA-----------TCCCNNNAAAGTT-ATGAGG--GGTGCATT 574
consensus_6334#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNAAAAANAAAAANNNNNNNANNNN 545
                           ** *      *  *                  ***    *  *            

consensus_6334#0      GCTCACACTGTATACATATACATCGTTATCATGCATGGCACGAGAACACTTTTCAGTTAG 1060
consensus_6334#2      GCTCAAAAAAAA------------------------------------------------ 609
consensus_6334#3      GNCCAAAAA--------------------------------------------------- 583
consensus_6334#1      NNNNNNNNNAAAAAANAANNNNGGGCCCCCCCNCCGGGAAAAAANNAAGCACTCAGCACC 605
                                                                                  

consensus_6334#0      CCAGAAATTTGTGTGCATTCGATTCGAGATCTGTAACTTGTACTGGTAGTAACTTGTAAG 1120
consensus_6334#2      ------------------------------------------------------------
consensus_6334#3      ------------------------------------------------------------
consensus_6334#1      CCTAAACGAAAAAAAAATGCGCTCTTAGANGCAATAATGATCCAAACTGCTTCCCGCATA 665
                                                                                  

consensus_6334#0      CCAGAAATGCC------------------------------------------------- 1131
consensus_6334#2      ------------------------------------------------------------
consensus_6334#3      ------------------------------------------------------------
consensus_6334#1      AAAGAGAAAACCGGTTCCCCGGTTCACAACCGAAGCACCCAAAAGCTGTAAAGTGAAAGC 725
                                                                                  

consensus_6334#0      ------------------------------------------------------------
consensus_6334#2      ------------------------------------------------------------
consensus_6334#3      ------------------------------------------------------------
consensus_6334#1      TGTGAGTTGCCAAGGACTCTAGCCACTTCCCTACCCTTGGATTATTGATACGGCCAACTG 785
                                                                                  

consensus_6334#0      ---------------------------------
consensus_6334#2      ---------------------------------
consensus_6334#3      ---------------------------------
consensus_6334#1      CCCAGTAAAGAAACACAAAACCTTATTGGCTTT 818
                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)