cluster # 6346

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Oryza sativa
cluster # 6346 cluster # 6346 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6346#0 length = 1827 sequences # 4
consensusID : consensus_6346#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1827
fasta sequence
                              [TTCCCCCATCTCCGCGGGAAACAAACCGGAGCTCGCCTTGGCCTCGCCGCCGGCCTCCTCCTCCTCCTCCATCGCCGCACGCTCTCCCTCCGAACCCTAACCCTAGCTCGCTCGCTCCGGGGTCCCGGGCCATGCTCTCCACGGCGGCGCCATCCTCAACCTCCCTCGTCGCCTCGTTCCCGTCACGCGCGCGCCGGCGGGGGCTCCCGGGCCGACGCGGCGTGGTCGTCGCGGCCGCGGGGGCGGGGCCGGGGGCGGGGGCGGCGGAGAGGTTCGCGGCAAGCAGCAGCTCCATCACCGACTACCTGCG-GTACCGCCGCCCGGGGTCCGCCGGGG-GAG-GTGGGGGAACCGGGGTGTGCGGCGGGGAGCTGCAGACGGCGGTG-GTGCG-GTACGAGAAGCGGCTCCCGTGGTCGCTCATCCACCCCTTCCTCCATGTTGATTTGGTTTCTACTGTCCACATTGCTGACAAAGAATACTTCGATAGACTCCAGCAAGCACTTCAAGATTATGATTGTGTTCTTTATGAAATGGTTACAAGTCGGGAGAACTTAA-ACAA-TCGCAAGGACCCAACCTTTGCGAAGAAGCTGAAATCTTCACGTAGGGGATTCAGTATTCTTGGCTTCATACAGAAGCAAATGGCAAACATCCTTTCATTGGATTACCAGCTAGATTGCCTTGACTATGGCAGTGAAAAATGGCAACATGCTGACCTTGATTTTGAGACATTCAAGCAGCTTCAGAGTGAAAGAGGTGAAAGTCTTTTCACGTTTGCGGTAGACATGACACTGAAATCAACTAAAGCCTTGGTACAACCAACATTGCCTGATGGTCTTGACTTCTGGAGGTCTAAGCTGCTTTGGGCCTCACGTGTTCTACCAATGCCTCTTGTTGGACTGTTCCTTATCAGTGGGCTTTGCTTACCAATCGACGATCAAGGTGGATATCCTGAGCTTGAAGCATTGTCCAGGCTAGATTTTGGAGCTGCACTGAAGATTTTTCTGGCTAAGCAATTGACCTCCGATTTCACATCTATGACCTCACCCATTGAGGAAAAGTCAGTTATCATTGGGGAAAGGAATAGAGTTGCTACTGAGAAGATACAGGAAGCAATAAACCATGGGTACAAGAGAATAGCTGTCCTTTATGGAGGTGGGCATATGCCGGACCTGGGAAGACGTCTTCGTGAAGAGCTCAATATGGTCCCAGCTGACGTCCAGTGGGTGACAGCATGGTCAATTAGAA-GCCGGGAGCTAGACAGGGAATCTCTTCCATTCCTGAAGACCATGGCTGAAGTCTCAGGGTGGCCTTTGAATAGATACGAGACACTTGCTCTGCTTATCTTTTCTTCAGTTCTCGCAGTGGATCTTTGGTTCTGGGAGCTTCTTGTGGGTACTGCCGTGAACTGGGCATCTTTGGCTGGCTCATGGATTGAACAATTTAATGGTCCATTTTGACATCTAATGGGCAGAAGCAAAAGAAAAAGGAAACAAACAAAGAAAGAAAAGAAATAAAACAAAACAAAACACTTAACAACAGAATTGGCAGTGGAAAATAGATCATGTCCTTGTTGTTTAAATTCCAGTTATTTCTGGAATACTGCAACACGTTTGTATATAACCATTTGTTGGATCAAACTGGAATGAGTTTAAATGAAAATTGTCAAGCTACATGATGCAAAAAAAACGCTGGATTTTGCATCTGGAATTTTGGTCAGCAGATATAGTTGGTATGAACTTATGGTATTTATTTATTATCATGTGGTACCCCCTGATAAGGAGCTGGGATATATTACAAGTAAGCCCTGATGTTACAAGCGCAATCTTCACA]

[+] EMBL AK105106             [TTCCCCCATCTCCGCGGGAAACAAACCGGAGCTCGCCTTGGCCTCGCCGCCGGCCTCCTCCTCCTCCTCCATCGCCGCACGCTCTCCCTCCGAACCCTAACCCTAGCTCGCTCGCTCCGGGGTCCCGGGCCATGCTCTCCACGGCGGCGCCATCCTCAACCTCCCTCGTCGCCTCGTTCCCGTCACGCGCGCGCCGGCGGGGGCTCCCGGGCCGACGCGGCGTGGTCGTCGCGGCCGCGGGGGCGGGGCCGGGGGCGGGGGCGGCGGAGAGGTTCGCGGCAAGCAGCAGCTCCATCACCGACTACCTGCG GTACCGCCGCCCGGGGTCCGCCGGGG GAG GTGGGGGAACCGGGGTGTGCGGCGGGGAGCTGCAGACGGCGGTG GTGCG GTACGAGAAGCGGCTCCCGTGGTCGCTCATCCACCCCTTCCTCCATGTTGATTTGGTTTCTACTGTCCACATTGCTGACAAAGAATACTTCGATAGACTCCAGCAAGCACTTCAAGATTATGATTGTGTTCTTTATGAAATGGTTACAAGTCGGGAGAACTTAA ACAA TCGCAAGGACCCAACCTTTGCGAAGAAGCTGAAATCTTCACGTAGGGGATTCAGTATTCTTGGCTTCATACAGAAGCAAATGGCAAACATCCTTTCATTGGATTACCAGCTAGATTGCCTTGACTATGGCAGTGAAAAATGGCAACATGCTGACCTTGATTTTGAGACATTCAAGCAGCTTCAGAGTGAAAGAGGTGAAAGTCTTTTCACGTTTGCGGTAGACATGACACTGAAATCAACTAAAGCCTTGGTACAACCAACATTGCCTGATGGTCTTGACTTCTGGAGGTCTAAGCTGCTTTGGGCCTCACGTGTTCTACCAATGCCTCTTGTTGGACTGTTCCTTATCAGTGGGCTTTGCTTACCAATCGACGATCAAGGTGGATATCCTGAGCTTGAAGCATTGTCCAGGCTAGATTTTGGAGCTGCACTGAAGATTTTTCTGGCTAAGCAATTGACCTCCGATTTCACATCTATGACCTCACCCATTGAGGAAAAGTCAGTTATCATTGGGGAAAGGAATAGAGTTGCTACTGAGAAGATACAGGAAGCAATAAACCATGGGTACAAGAGAATAGCTGTCCTTTATGGAGGTGGGCATATGCCGGACCTGGGAAGACGTCTTCGTGAAGAGCTCAATATGGTCCCAGCTGACGTCCAGTGGGTGACAGCATGGTCAATTAGAA GCCGGGAGCTAGACAGGGAATCTCTTCCATTCCTGAAGACCATGGCTGAAGTCTCAGGGTGGCCTTTGAATAGATACGAGACACTTGCTCTGCTTATCTTTTCTTCAGTTCTCGCAGTGGATCTTTGGTTCTGGGAGCTTCTTGTGGGTACTGCCGTGAACTGGGCATCTTTGGCTGGCTCATGGATTGAACAATTTAATGGTCCATTTTGACATCTAATGGGCAGAAGCGAAAGAAAAA                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BU667241             [                                                                                                                                                                                                                                                                                  CGCGGC AGCAGCAGCTCCATCACCGACTACCTGCGTGTACCG CGCCCGGGGTCCGCCGGGGTGAGTGTGGGGGAACCGGGGTGTGCGGCGGGGAGCTGCAGACGGCGGTGTGTGCGTGTACGA AAGCGGCTCCCGTGGTCGCTCATCCACCCCTTCCTCCATGTTGATTTGGTTTCTACTGTCCACATTGCTGACAAAGAATACTTCGATAGACTCCAGCAAGCACTTCAAGATTATGATTGTGTTCTTTATGAAATGGTTACAAGTCGGGAGAACTTAACACAACTCGCAAGGACCCAACCTTTGCGAAGAAGCTGAAATCTTCACGTAGGGGATTCAGTATTCTTGGCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF325371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCGGACCTGGGAAGACGTCTTCGTGAAGAGCTCAATATGGTCCCAGCTGACGTCCAGTGGGTGACAGCATGGTCAATTAGAA GCCGGGAGCTAGACAGGGAATCTCTTCCATTCCTGAAGACCATGGCTGAAGTCTCAGGGTGGCCTTTGAATAGATACGAGACACTTGCTCTGCTTATCTTTTCTTCAGTTCTCGCAGTGGATCTTTGGTTCTGGGAGCTTCTTGTGGGTACTGCCGTGAACTGGGCATCTTTGGCTGGCTCATGGATTGAACAATTTAATGGTCCATTTTGACATCTAATGGGCAGAAGCAAAAGAAAAAGGAAACAAACAAAGAAAGAAAAGAAATAAAACAAAACAAAACACTTAACAACAGAATTGGCAGTGGAAAATAGATCATGTCCTTGTTGTTTAAATTCCAGTTATTTCTGGAATACTGCAACACGTTTGTATATAACCATTTGTTGGATCAAACTGGAATGAGTTTAAATGAAAATTGTCAAGCTACATGATGCAAAAAAAAC                                                                                                                                               ]
[-] EMBL CA762383             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ggGAAGAGCTCAATATGTTCCCAGCTGACGTCCAGTGGGTGACAGCATGGTCAATTAAAAGGCCGGGAGCTAGACAGGGAATCTCTTCCACTCCTGAAGACCATGGCTGAAGTCTCAGGGTGGCCTTTGAATAGATACGAGACACCTGCTCTGCTTATCTTTTCTTCAGTTCTCGCAGTGGATCTTTGGTTCTGGGAGCTTCTTGTGGGTACTGCCGTGAACTGGGCATCTTTGGCTGGCTCATGGATTGAACAATTTAATGGTCCATTTTGACATCTAATGGGCAGAAGCAAAAGAAAAAGGAACCAACCAAAGAAAGAAAAGAAATAAACCAAACCAAAACACTTAACAACAGAATTGGCAGTGGAAAATAGATCATGTCCTTGTTGTTTAAATTCCAGTTATTTCTGGAATACTGCAACACGTTTGTATATAACCATTTGTTGGATCAAACTGGAATGAGTTTAAATGAAAATTGTCAGGCTACATGATGCAATATTTGTGCTGGATTTTGCATCTGGAATTTTGGTCAGCAGATATAGTTGGTATGAACTTATGGTATTTATTTATTATCATGTGGTACCCCCTGATAAGGAGCTGGGATATATTACAAGTAAGCCCTGATGTTACAAGCGCAATCTTCACA]




>consensus_6346#0
TTCCCCCATCTCCGCGGGAAACAAACCGGAGCTCGCCTTGGCCTCGCCGCCGGCCTCCTC
CTCCTCCTCCATCGCCGCACGCTCTCCCTCCGAACCCTAACCCTAGCTCGCTCGCTCCGG
GGTCCCGGGCCATGCTCTCCACGGCGGCGCCATCCTCAACCTCCCTCGTCGCCTCGTTCC
CGTCACGCGCGCGCCGGCGGGGGCTCCCGGGCCGACGCGGCGTGGTCGTCGCGGCCGCGG
GGGCGGGGCCGGGGGCGGGGGCGGCGGAGAGGTTCGCGGCAAGCAGCAGCTCCATCACCG
ACTACCTGCGGTACCGCCGCCCGGGGTCCGCCGGGGGAGGTGGGGGAACCGGGGTGTGCG
GCGGGGAGCTGCAGACGGCGGTGGTGCGGTACGAGAAGCGGCTCCCGTGGTCGCTCATCC
ACCCCTTCCTCCATGTTGATTTGGTTTCTACTGTCCACATTGCTGACAAAGAATACTTCG
ATAGACTCCAGCAAGCACTTCAAGATTATGATTGTGTTCTTTATGAAATGGTTACAAGTC
GGGAGAACTTAAACAATCGCAAGGACCCAACCTTTGCGAAGAAGCTGAAATCTTCACGTA
GGGGATTCAGTATTCTTGGCTTCATACAGAAGCAAATGGCAAACATCCTTTCATTGGATT
ACCAGCTAGATTGCCTTGACTATGGCAGTGAAAAATGGCAACATGCTGACCTTGATTTTG
AGACATTCAAGCAGCTTCAGAGTGAAAGAGGTGAAAGTCTTTTCACGTTTGCGGTAGACA
TGACACTGAAATCAACTAAAGCCTTGGTACAACCAACATTGCCTGATGGTCTTGACTTCT
GGAGGTCTAAGCTGCTTTGGGCCTCACGTGTTCTACCAATGCCTCTTGTTGGACTGTTCC
TTATCAGTGGGCTTTGCTTACCAATCGACGATCAAGGTGGATATCCTGAGCTTGAAGCAT
TGTCCAGGCTAGATTTTGGAGCTGCACTGAAGATTTTTCTGGCTAAGCAATTGACCTCCG
ATTTCACATCTATGACCTCACCCATTGAGGAAAAGTCAGTTATCATTGGGGAAAGGAATA
GAGTTGCTACTGAGAAGATACAGGAAGCAATAAACCATGGGTACAAGAGAATAGCTGTCC
TTTATGGAGGTGGGCATATGCCGGACCTGGGAAGACGTCTTCGTGAAGAGCTCAATATGG
TCCCAGCTGACGTCCAGTGGGTGACAGCATGGTCAATTAGAAGCCGGGAGCTAGACAGGG
AATCTCTTCCATTCCTGAAGACCATGGCTGAAGTCTCAGGGTGGCCTTTGAATAGATACG
AGACACTTGCTCTGCTTATCTTTTCTTCAGTTCTCGCAGTGGATCTTTGGTTCTGGGAGC
TTCTTGTGGGTACTGCCGTGAACTGGGCATCTTTGGCTGGCTCATGGATTGAACAATTTA
ATGGTCCATTTTGACATCTAATGGGCAGAAGCAAAAGAAAAAGGAAACAAACAAAGAAAG
AAAAGAAATAAAACAAAACAAAACACTTAACAACAGAATTGGCAGTGGAAAATAGATCAT
GTCCTTGTTGTTTAAATTCCAGTTATTTCTGGAATACTGCAACACGTTTGTATATAACCA
TTTGTTGGATCAAACTGGAATGAGTTTAAATGAAAATTGTCAAGCTACATGATGCAAAAA
AAACGCTGGATTTTGCATCTGGAATTTTGGTCAGCAGATATAGTTGGTATGAACTTATGG
TATTTATTTATTATCATGTGGTACCCCCTGATAAGGAGCTGGGATATATTACAAGTAAGC
CCTGATGTTACAAGCGCAATCTTCACA
clustalw multiple alignements is not computed in this case