cluster # 6347

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Oryza sativa
cluster # 6347 cluster # 6347 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6347#0 length = 586 sequences # 4

consensusID : consensus_6347#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 586
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGGCAATATGGTTACATATAATTTACATACAGATCTGTATAAAAGAACTGCAACAAAAGCTTACAGACGCAGCTAAAGGTTTGTGGATACACAGAATATAAACTGAGTAACTTAAATATACGAGTTTAATGAAAACAAGAATTTACACCTATTCTATACAAGAATGTAAGACATTGTTTATGTTTTAGAAGAACAGTGCAAGCATATACATTATA-TATGGAAAGAATAAATAAGATACATAAATAACAAT-GGGGATGGTAAAAATGCACAGAAGAATGTGGTTGGCCGAAATGGGGTAAATTTTCACATCACTCGCTTATATTCACTCGCCTTCGCAGAGGGCAAACAAATATTGCCTTCTTAGCTGTGGCTATCATGTGTCAATTTT-GGGGATGTTGAACTTGCAGGTAATATTAAATAATTGAAGTCATGGTCTAGACCTCGTATTGTCTCAATGAGGACTCCAGCAGCTGATGGCTGGGGCAGATCATCTCCATCACTCGTGTCCCATCCTTGTAAATTTT]

[-] EMBL CF311091             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGGCAATATGGTTACATATAATTTACATACAGATCTGTATAAAAGAACTGCAACAAAAGCTTACAGACGCAGCTAAAGGTTTGTGGATACACAGAATATAAACTGAGTAACTTAAATATAAGAGTTTAATGAAAACAAGAATTTACACCTATTCTATACAAGAATGTAAGACATTGTTTATGTTTTAGAAGAACAGTGCAAGCATATACATTA                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF325377             [                                     cgagTTTTTTTTTTTTTTTTTTTATGGGCAATATGGTTACATATAATTTACATACAGATCTGTATAAAAGAACTGCAACAAAAGCTTACAGACGCAGCTAAAGGTTTGTGGATACACAGAATATAAACTGAGTAACTTAAATATACGAGTTTAATGAAAACAAGAATTTACACCTATTCTATACAAGAATGTAAGACATTGTTTATGTTTTAGAAGAACAGTGCAAGCATATACATTATA TATGGAAAGAATAAATAAGATACATAAATAACAATGGGGGATGGTAAAAATGCACAGAAGAATGTGGTTGGCCGAAATGGGGTAAATTTTCACATCACTCGCTTATATTCACTCGCCTTCGCAGAGGGCAAACAAATATTGCCTTCTTAGCTGTGGCTATCATGTGTCAATTTTGGGGGATGTTGAACTTGCAGGTAATATTAAATAATTGAA                                                                                                  ]
[+] EMBL CB636596             [                                                                                                                                                                    CTGAGTTACTTAAATATACGAGTTTAATGAAAACAAGAATTTACACCTATTCTATACAAGAATGTAAGACATTGTTTATGTTTTAGAAGAACAGTGCAAGCATATACATTATA TATGGAAAGAATAAATAAGATACATAAATAACAAT GGGGATGGTTAAAATGCACAGAAGAATGTGGTTGGCCGAAATGGGGTAAATTTTCACATCACTCGCTTATATTCACTCGCCTTCGCAGAGGGCAAACAAATATTGCCTTCTTAGCTGTGGCTATCATGTGTCAATTTT GGGGATGTTGAACTTGCAGGTAATATTAAATAATTGAAGTCATGGTCTAGACCTCGTATTGTCTCAATGAGGACTCCAGCAGCTGATGGCTGGGGCAGATC                                   ]
[+] EMBL CB636941             [                                                                                                                                                                                                                           ACAAAAATGTAAGACATTGTTTATGTTTTAGAAGAACAGTGCAAGCATATACATTATATTATGGAAAGAATAAATAAGATACATAAATAACAAT GGGGATGGTAAAAATGCACAGAAGAATGTGGTTGGCCGAAATGGGGTAAATTTTCACATCACTCGCTTATATTCACTCGCCTTCGCAGAGGGCAAACAAATATTGCCTTCTTAGCTGTGGCTATCATGTGTCAATTTT GGGGATGTTGAACTTGCAGGTAATATTAAATAATTGAAGTCATGGTCTAGACCTCGTATTGTCTCAGTGAGGACTCCAGCAGCTGATGGCTGGGGCAGATCATCTCCATCACTCGTGTCCCATCCTTGTAAATTTT]




>consensus_6347#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
ATGGGCAATATGGTTACATATAATTTACATACAGATCTGTATAAAAGAACTGCAACAAAA
GCTTACAGACGCAGCTAAAGGTTTGTGGATACACAGAATATAAACTGAGTAACTTAAATA
TACGAGTTTAATGAAAACAAGAATTTACACCTATTCTATACAAGAATGTAAGACATTGTT
TATGTTTTAGAAGAACAGTGCAAGCATATACATTATATATGGAAAGAATAAATAAGATAC
ATAAATAACAATGGGGATGGTAAAAATGCACAGAAGAATGTGGTTGGCCGAAATGGGGTA
AATTTTCACATCACTCGCTTATATTCACTCGCCTTCGCAGAGGGCAAACAAATATTGCCT
TCTTAGCTGTGGCTATCATGTGTCAATTTTGGGGATGTTGAACTTGCAGGTAATATTAAA
TAATTGAAGTCATGGTCTAGACCTCGTATTGTCTCAATGAGGACTCCAGCAGCTGATGGC
TGGGGCAGATCATCTCCATCACTCGTGTCCCATCCTTGTAAATTTT

clustalw multiple alignements is not computed in this case