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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6353 cluster # 6353       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6353#0 length = 775 sequences # 4  

consensusID : consensus_6353#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 775
fasta sequence
                              [TTCTTTTTTTTTTTTTTTTTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTAATCTACCTGTTGCCCGAGTAGAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTCGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAATGGTGGCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGGCGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCACTTCTACCGTATCTGTCCCCTTGTCT-CGTCCTCTCTCCTTCTGCTCCAGAATTCCCAGTGGCGTCATGACCCCTGCTTCCCTGATCTGAAGTTGTCTCATACCTGTCACCCCTCTCACCACCTGGCCTTCTTTGCTCCCGCTTCGTGCCACGGTTATTTGGTGGAGGTGGTGGGGGCATGAAGGGAGCCATACCAACGGGTCGATTTGGCCGTCCAGGCCCACCCATTCCCAAGCCTCCCATTAGCGGTCCACGACCAGGACCCATCATCATTTCTAGCCCCATAGGAAACATGCCCCCAGGTTGTGGGGGC]

[+] EMBL CA761006             [TTCTTTTTTTTTTTTTTTTTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTAATCTACCTGTTGCCCGAGTAGAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTCGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAATGGTGGCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGGCGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCACTTCTACCGTATCTGTCCCCTTGTCT CGTCCTCT                                                                                                                                                                                                                                                                                      ]
[-] EMBL C96907               [        TTTTTTGGAAGTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTCATCTACCTGTTGCCCGAGTAAAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTTGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAAT    GCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATC                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CA766951             [            TTTTTTTTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTAATCTACCTGTTGCCCGAGTAGAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTCGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAATGGTGGCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGGCGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCACTTCTACC                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB674877             [                                       TTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTCATCTACCTGTTGCCCGAGTAAAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTTGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAAT    GCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGGCGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCGCTTCTACCGTATCTGTCCCC AGACTGCGACCTGGCTCCTTCTGCTCCAGAATTCCCAGTGGCGTCATGACCCCTGCTTCCCTGATCTGAAGTTGTCTCATACCTGTCACCCCTCTCACCACCTGGCCTTCTTTGCTCCCGCTTCGTGCCACGGTTATTTGGTGGAGGTGGTGGGGGCATGAAGGGAGCCATACCAACGGGTCGATTTGGCCGTCCAGGCCCACCCATTCCCAAGCCTCCCATTAGCGGTCCACGACCAGGACCCATCATCATTTCTAGCCCCATAGGAAACATGCCCCCAGGTTGTGGGGGC]


>consensus_6353#0 TTCTTTTTTTTTTTTTTTTTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTA ACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACT ACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTAATCTA CCTGTTGCCCGAGTAGAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATA CAGATTCAGTAATTCGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAA CTTTCTAAACGTTTCAACTGCTCAGGTTTCAATGGTGGCGCTCTCAACAGAGAGCACACA ATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGG CGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCACTTCTACCGTATCTGTC CCCTTGTCTCGTCCTCTCTCCTTCTGCTCCAGAATTCCCAGTGGCGTCATGACCCCTGCT TCCCTGATCTGAAGTTGTCTCATACCTGTCACCCCTCTCACCACCTGGCCTTCTTTGCTC CCGCTTCGTGCCACGGTTATTTGGTGGAGGTGGTGGGGGCATGAAGGGAGCCATACCAAC GGGTCGATTTGGCCGTCCAGGCCCACCCATTCCCAAGCCTCCCATTAGCGGTCCACGACC AGGACCCATCATCATTTCTAGCCCCATAGGAAACATGCCCCCAGGTTGTGGGGGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)