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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6388#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2100 fasta sequence
[TGCCTCCATCCTAGCTAGGTAGCTATATCGTCGTCATTAATTGGAGCTAGCTAGGGAGGCAGCAGGCAGAGCGCAGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAGGTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGGTGTCGTTCAAGAACGGCGGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGAAGTCGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGGGGAAGGCCGCCGGCAATGGCGCCAGCTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCGTGACGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGAACGACAAGCGCACGTCGGGCGCCCTGC-AGAACTGCAAGGAGCTGCTGGAGTATGCCGTGGACGACCTCAAGACGTCGTTCGAGAAGCTCGGGGGGTTCGAGATGACCAACTTCCACAAGGCCGTGGACGACCTCCGCACCTGGCTCAGCGCCGCCCTCACCTACCAGGGCACCTGCCTCGACGGCTTCCTCAACACCACCACCGACGCCGCCGACAAGATGAAAAGCGCCCTCAACAGCTCGCAGGAGCTCACGGAGGACATCCTCGCCGTCGTCGACCAGTTCTCCGCCACGCTCGGCAGCCTCAACATCGGCCGCCGCCGCCTGCTCGCCGACGACGGCATGCCGGTGTGGATGTCGGAGGGCGGGAGGCGGCAGCTGCTGGAGGCGGCGGGGCCCGAGGCCGGGCCCGTGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGGAGCGGCGACGTGAAGACGATCGGCGAGGCGGTGGCGAAGGTGCCCCCGAAGAACAAGGAGCGGTACACCATCTACGTGAAGGCCGGGACGTACAATGAGTACGTGTCGGTGGGGCGGCCGGCGACGAACGTGAACATGATAGGCGACGGCATCGGGAAGACCATCATCACGGGGAACAAGAACTTCAAGATGAACCTGACGACCAAGGACACGGCGACGATGGAGGCGATCGGGAACGGCTTCTTCATGAGGGGGATCACGGTGGAGAACACGGCGGGGCCGGAGAACCACCAGGCGGTGGCTCTCCGCGCGCAGAGCGACATGGCGGTGTTCTACCAGTGCGAGTTCGACGGGTACCAGGACACGCTGTACCCGCACGCGCAGCGCCAGTTCTTCCGCGACTGCACAGTGTCGGGGACAATCGACTTCATATTCGGGAACTCGCAGGTTGTTCTTCAGAACTGCTTGCTCCAGCCTCGTAAGCCGATGGACAACCAGGTGAACATCATAACGGCGCAGGGGCGGCGGGAGAAGAGGTCGGCGGGAGGGACGGTGATCCACAACTGCACGGTGGCGCCGCACCCGGACCTGGAGAAGTTCACGGACAAGGTGAAGACGTACCTGGCGCGGCCGTGGAAGGAGTACTCGCGGACCATCTTCGTGCAGAACGAGATCGGGGCGGTGGTGGATCCGGTGGGGTGGCTGGAGTGGAACGGCAACTTCGCCCTGGACACCCTCTACTACGCGGAGGTTGACAACCATGGCCCCGGCGCCGACATGAGCAAGCGCGCCAAGTGGAAGGGCGTCCAGTCCCTCACCTACCAGGACGTCCAGAAGGAGTTCACCGTGGAGGCCTTCATCCAGGGCCAGGAGTTCATCCCCAAGTTCGGCGTCCCTTACATCCCCGGCCTTCTCCCCCAGACGCAGCAGGGCAGGATGCACTAATTTTTCACTCCTGTACTATAACCATCATCGCCCCAGCCCCCAGCCCGGACCTACGTACTACACACTATATATGGATCTTCGATCTCTCACTCACCTGCATCAATTGCCGGCCCCCATTATTTATTTTCATATACATATACTTGTTGTTATATATATATATGCATCTCACACATTCCAACTGCAGTCGCCGCGGTTGATTAACTAAATTAGTAGCTCGATCATGGAACATGCATATGCATGGATCTCGATTGTTTTGGGACTGGATCCAAAATGTATATAATGTATATTCAATCTCTT]
[+] EMBL AK071728 [TGCCTCCATCCTAGCTAGGTAGCTATATCGTCGTCATTAATTGGAGCTAGCTAGGGAGGCAGCAGGCAGAGCGCAGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAGGTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGGTGTCGTTCAAGAACGGCGGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGAAGTCGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGGGGAAGGCCGCCGGCAATGGCGCCAGCTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCGTGACGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGAACGACAAGCGCACGTCGGGCGCCCTGC AGAACTGCAAGGAGCTGCTGGAGTATGCCGTGGACGACCTCAAGACGTCGTTCGAGAAGCTCGGGGGGTTCGAGATGACCAACTTCCACAAGGCCGTGGACGACCTCCGCACCTGGCTCAGCGCCGCCCTCACCTACCAGGGCACCTGCCTCGACGGCTTCCTCAACACCACCACCGACGCCGCCGACAAGATGAAAAGCGCCCTCAACAGCTCGCAGGAGCTCACGGAGGACATCCTCGCCGTCGTCGACCAGTTCTCCGCCACGCTCGGCAGCCTCAACATCGGCCGCCGCCGCCTGCTCGCCGACGACGGCATGCCGGTGTGGATGTCGGAGGGCGGGAGGCGGCAGCTGCTGGAGGCGGCGGGGCCCGAGGCCGGGCCCGTGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGGAGCGGCGACGTGAAGACGATCGGCGAGGCGGTGGCGAAGGTGCCCCCGAAGAACAAGGAGCGGTACACCATCTACGTGAAGGCCGGGACGTACAATGAGTACGTGTCGGTGGGGCGGCCGGCGACGAACGTGAACATGATAGGCGACGGCATCGGGAAGACCATCATCACGGGGAACAAGAACTTCAAGATGAACCTGACGACCAAGGACACGGCGACGATGGAGGCGATCGGGAACGGCTTCTTCATGAGGGGGATCACGGTGGAGAACACGGCGGGGCCGGAGAACCACCAGGCGGTGGCTCTCCGCGCGCAGAGCGACATGGCGGTGTTCTACCAGTGCGAGTTCGACGGGTACCAGGACACGCTGTACCCGCACGCGCAGCGCCAGTTCTTCCGCGACTGCACAGTGTCGGGGACAATCGACTTCATATTCGGGAACTCGCAGGTTGTTCTTCAGAACTGCTTGCTCCAGCCTCGTAAGCCGATGGACAACCAGGTGAACATCATAACGGCGCAGGGGCGGCGGGAGAAGAGGTCGGCGGGAGGGACGGTGATCCACAACTGCACGGTGGCGCCGCACCCGGACCTGGAGAAGTTCACGGACAAGGTGAAGACGTACCTGGCGCGGCCGTGGAAGGAGTACTCGCGGACCATCTTCGTGCAGAACGAGATCGGGGCGGTGGTGGATCCGGTGGGGTGGCTGGAGTGGAACGGCAACTTCGCCCTGGACACCCTCTACTACGCGGAGGTTGACAACCATGGCCCCGGCGCCGACATGAGCAAGCGCGCCAAGTGGAAGGGCGTCCAGTCCCTCACCTACCAGGACGTCCAGAAGGAGTTCACCGTGGAGGCCTTCATCCAGGGCCAGGAGTTCATCCCCAAGTTCGGCGTCCCTTACATCCCCGGCCTTCTCCCCCAGACGCAGCAGGGCAGGATGCACTAATTTTTCACTCCTGTACTATAACCATCATCGCCCCAGCCCCCAGCCCGGACCTACGTACTACACACTATATATGGATCTTCGATCTCTCACTCACCTGCATCAATTGCCGGCCCCCATTATTTATTTTCATATACATATACTTGTTGTTATATATATATATGCATCTCACACATTCCAACTGCAGTCGCCGCGGTTGATTAACTAAATTAGTAGCTCGATCATGGAACATGCATATGCATGGATCTCGATTGTTTTGGGACTGGATCCAAAATGTATATAATGTATATTCAATCTCTT]
[+] EMBL C73169 [ AGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAGGTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGGTGTCGTTCAAGAACGGCGGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGAAGTCGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGGGGAAGGCCGCCGGCAATGGCGCCA CTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCGTGACGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGAACGACAAGCGCACGTCGGGCGCCCTGCAAGAACTTCAAGGAANTTCTGGAATATGCCGTGGACGACCTCAAGA ]
consensusID : consensus_6388#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2080 fasta sequence
[GGGACGACGCATCGATCGATCCCGACGCCTTTGCGCGCGCGCGCAAAATCGATCATTTGATACATATCTCGCGTGAATCGTCGACTGGTGGTTGCATTGTGTTGCAATGAGCAAAGGCGCGATCATCGGCGCGTCGACCGTGCTGGTGGTGGCGGTGGTGGCGGCGGTGTGCGTGGTGTCGTTCAAGAACGGGTCGAGCAATGCCAAGGAGGACGGCGAGCTGTCGACGTCGGTGAAGTCGATCAAGTCGTTCTGCCAGCCGGTGGACTACCGGGAGACGTGCGAGACCACGCTGGAGCAGACGGCGGGCAACGCGACGAACCCGACGGACCTCGCCAAGGCCATCTTCAAGGCGACGTCGGAGCGGATCGAGAAGGCGGTGAGGGAGTCCGCCGTGCTCAACGACCTCAAGAACGACCCGCGCACGTCCGACGCGCTCAAGGACTGCGAGGAGCTGCTCGACTACGCCATCGACGACCTCAAGACGACGTTCGACAAGCTCGGCGGGTTCCAGACGAGCAACTTCAAGCGCGCCGTGGACGACGTCAAGACGTGGCTCAGCTCGGCGCTGACGTACCAGGAGACGTGCCTCGACGGGTTCGAGAACTCTACGTCGACGGAGGCGTCGGAGAAGATGCGCAAGGCGCTCAAGAGCTCGCAGGAGCTGACGGAGAACTTCCTCGCCATCGTGGACCAGTTCGCCGACACGCTGGCGAACCTGGACATCACCGGATTCAGCCGCCGGCTGCTCGGCGACGACGGCGTGCCCGTGTGGATGTCCAACGCGAAGCGCCGGCTGCTGGAGGCGACCCCGGGCTCCAAGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGCAGCGGCGACTTCAAGACCATCAATGAGGCGCTGGCCAAGGTGCCGGTCAAGAGCACGGGGACGTACGTGATGTACGTGAAGGCCGGGACGTACAAGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCGGCGACGGCGCCACCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCACCAAGGACACGGCCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCGTGGAGAACACGGCCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACCAGTCGGCGTTCTACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCAGCAGGCAGTACTACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACGCGCAGGTGGTGCTCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGAACATCGTGACGGCGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACAACTGCACCATCGAGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCCTCGGCCGCCCGTGGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGTTCATCGACCCGCAGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACTACGCCGAGGTGGAGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAAGTGGAGAGGGGTCAAGACGGTCACGTACCAGCAGGCGCAGCAGAAGTACACCGTCGAGAGGTTCATCCAGGGACAGACGTGGCTCCCAAAGTTCGGCGTGCCGTTCATCCCCGGCCTGTTGCCGCAGGAGCAGTCAGGGAGGATACACTGATCCATCGTGCGTCGTCTCGTCGGCCTATATATATGCTAGCGGGTAATTGTTTGCATCATGTTGCTGTCGTCGTCAACTCCTGTGATCTCTATAGCGTTCTCTGCTGTACTCTAATCCATAGAAATGCATTCTTTTCTCCATAGAATTTGCGTACGCGTAGTACATTGCATATACTAGTACTACTTAATTATATTTACGTGTTGTACGGGTTGTTACGAATCGATTATTGTTTTTACTGATCGACAAATGGTGAAACTAATAGATAAGGTTTGACAG]
[+] EMBL AK070513 [GGGACGACGCATCGATCGATCCCGACGCCTTTGCGCGCGCGCGCAAAATCGATCATTTGATACATATCTCGCGTGAATCGTCGACTGGTGGTTGCATTGTGTTGCAATGAGCAAAGGCGCGATCATCGGCGCGTCGACCGTGCTGGTGGTGGCGGTGGTGGCGGCGGTGTGCGTGGTGTCGTTCAAGAACGGGTCGAGCAATGCCAAGGAGGACGGCGAGCTGTCGACGTCGGTGAAGTCGATCAAGTCGTTCTGCCAGCCGGTGGACTACCGGGAGACGTGCGAGACCACGCTGGAGCAGACGGCGGGCAACGCGACGAACCCGACGGACCTCGCCAAGGCCATCTTCAAGGCGACGTCGGAGCGGATCGAGAAGGCGGTGAGGGAGTCCGCCGTGCTCAACGACCTCAAGAACGACCCGCGCACGTCCGACGCGCTCAAGGACTGCGAGGAGCTGCTCGACTACGCCATCGACGACCTCAAGACGACGTTCGACAAGCTCGGCGGGTTCCAGACGAGCAACTTCAAGCGCGCCGTGGACGACGTCAAGACGTGGCTCAGCTCGGCGCTGACGTACCAGGAGACGTGCCTCGACGGGTTCGAGAACTCTACGTCGACGGAGGCGTCGGAGAAGATGCGCAAGGCGCTCAAGAGCTCGCAGGAGCTGACGGAGAACTTCCTCGCCATCGTGGACCAGTTCGCCGACACGCTGGCGAACCTGGACATCACCGGATTCAGCCGCCGGCTGCTCGGCGACGACGGCGTGCCCGTGTGGATGTCCAACGCGAAGCGCCGGCTGCTGGAGGCGACCCCGGGCTCCAAGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGCAGCGGCGACTTCAAGACCATCAATGAGGCGCTGGCCAAGGTGCCGGTCAAGAGCACGGGGACGTACGTGATGTACGTGAAGGCCGGGACGTACAAGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCGGCGACGGCGCCACCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCACCAAGGACACGGCCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCGTGGAGAACACGGCCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACCAGTCGGCGTTCTACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCAGCAGGCAGTACTACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACGCGCAGGTGGTGCTCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGAACATCGTGACGGCGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACAACTGCACCATCGAGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCCTCGGCCGCCCGTGGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGTTCATCGACCCGCAGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACTACGCCGAGGTGGAGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAAGTGGAGAGGGGTCAAGACGGTCACGTACCAGCAGGCGCAGCAGAAGTACACCGTCGAGAGGTTCATCCAGGGACAGACGTGGCTCCCAAAGTTCGGCGTGCCGTTCATCCCCGGCCTGTTGCCGCAGGAGCAGTCAGGGAGGATACACTGATCCATCGTGCGTCGTCTCGTCGGCCTATATATATGCTAGCGGGTAATTGTTTGCATCATGTTGCTGTCGTCGTCAACTCCTGTGATCTCTATAGCGTTCTCTGCTGTACTCTAATCCATAGAAATGCATTCTTTTCTCCATAGAATTTGCGTACGCGTAGTACATTGCATATACTAGTACTACTTAATTATATTTACGTGTTGTACGGGTTGTTACGAATCGATTATTGTTTTTACTGATCGACAAATGGTGAAACTAATAGATAAGGTTTGACAG]
[+] EMBL CA766279 [ GATGTACGTGAAGGCCGGGACGTACAAGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCGGCGACGGCGCCACCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCACCAAGGACACGGCCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCGTGGAGAACACGGCCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACCAGTCGGCGTTCTACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCAGCAGGCAGTACTACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACGCGCAGGTGGTGCTCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGAACATCGTGACGGCGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACAACTGCACCATCGAGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCCTCGGCCGCCCGTGGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGTTCATCGACCCGCAGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACTACGCCGAGGTGGAGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAGGTGGAGAGGGGTCAAGACGGTCACGTAC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6388#0 -------TGCCTCCATCCTAGCTAGGTAGCTATATCGTCGT-CATTAATTGGAGCTAGCT 52
consensus_6388#1 GGGACGACGCATCGATCG-ATCCCGACGCCTTTGCGCGCGCGCGCAAAATCGATCATTTG 59
** ** *** * * * ** * ** * ** * ** *
consensus_6388#0 AGGGAGGCAGCAGGCAGAGCGCAGGGGGGCGGCCGGGCGGCGAGGGAACCATGAGCAAAG 112
consensus_6388#1 ATACATATCTCGCGTGAATCGTCGACTGGTGGTTGCATTGTGTTGCA---ATGAGCAAAG 116
* * * * * ** * ** ** * * * * * **********
consensus_6388#0 GTGCTATCATCGGCGCTTCCACCGTGCTGGTGGTGGCGGTGGTGGCAGCCGTGTGCGTGG 172
consensus_6388#1 GCGCGATCATCGGCGCGTCGACCGTGCTGGTGGTGGCGGTGGTGGCGGCGGTGTGCGTGG 176
* ** *********** ** ************************** ** **********
consensus_6388#0 TGTCGTTCAAGAACGGC---GGCGGCGGCAAGGAGGATGGCGAGCTGTCCACGTCGGTGA 229
consensus_6388#1 TGTCGTTCAAGAACGGGTCGAGCAATGCCAAGGAGGACGGCGAGCTGTCGACGTCGGTGA 236
**************** ** * ********* *********** **********
consensus_6388#0 AGTCGGTGAAGGCCTTCTGCCAGCCGACGGACTACCAGCAGACGTGCGAGGAGGAGCTGG 289
consensus_6388#1 AGTCGATCAAGTCGTTCTGCCAGCCGGTGGACTACCGGGAGACGTGCGAGACCACGCTGG 296
***** * *** * ************ ******** * *********** *****
consensus_6388#0 GGAAGGCCGCCGGCAATGGCGCCAGCTCGCCGACGGACCTGGCCAAGGCCATGTTCGCCG 349
consensus_6388#1 AGCAGACGGCGGGCAACGCGACGAAC---CCGACGGACCTCGCCAAGGCCATCTTCAAGG 353
* ** * ** ***** * * * * *********** *********** *** *
consensus_6388#0 TGACGTCGGAGAAGATCTCCAAGGCCATCAGCGAGTCGTCGACGCTGGAGGAGCTCAAGA 409
consensus_6388#1 CGACGTCGGAGCGGATCGAGAAGGCGGTGAGGGAGTCCGCCGTGCTCAACGACCTCAAGA 413
********** **** ***** * ** ***** * *** * ** *******
consensus_6388#0 ACGACAAGCGCACGTCGGGCGCCCTGCAGAACTGCAAGGAGCTGCTGGAGTATGCCGTGG 469
consensus_6388#1 ACGACCCGCGCACGTCCGACGCGCTCAAGGACTGCGAGGAGCTGCTCGACTACGCCATCG 473
***** ********* * *** ** ** ***** ********** ** ** *** * *
consensus_6388#0 ACGACCTCAAGACGTCGTTCGAGAAGCTCGGGGGGTTCGAGATGACCAACTTCCACAAGG 529
consensus_6388#1 ACGACCTCAAGACGACGTTCGACAAGCTCGGCGGGTTCCAGACGAGCAACTTCAAGCGCG 533
************** ******* ******** ****** *** ** ******* * *
consensus_6388#0 CCGTGGACGACCTCCGCACCTGGCTCAGCGCCGCCCTCACCTACCAGGGCACCTGCCTCG 589
consensus_6388#1 CCGTGGACGACGTCAAGACGTGGCTCAGCTCGGCGCTGACGTACCAGGAGACGTGCCTCG 593
*********** ** ** ********* * ** ** ** ******* ** *******
consensus_6388#0 ACGGCTTCCTCAACACCACC---ACCGACGCCGCCGACAAGATGAAAAGCGCCCTCAACA 646
consensus_6388#1 ACGGGTTCGAGAACTCTACGTCGACGGAGGCGTCGGAGAAGATGCGCAAGGCGCTCAAGA 653
**** *** *** * ** ** ** ** * ** ****** * ** ***** *
consensus_6388#0 GCTCGCAGGAGCTCACGGAGGACATCCTCGCCGTCGTCGACCAGTTCTCCGCCACGCTCG 706
consensus_6388#1 GCTCGCAGGAGCTGACGGAGAACTTCCTCGCCATCGTGGACCAGTTCGCCGACACGCTGG 713
************* ****** ** ******** **** ********* *** ****** *
consensus_6388#0 GCAGCCTCAACATCGGCCG------CCGCCGCCTGCTCGCCGACGACGGCATGCCGGTGT 760
consensus_6388#1 CGAACCTGGACATCACCGGATTCAGCCGCCGGCTGCTCGGCGACGACGGCGTGCCCGTGT 773
* *** ***** * * ****** ******* ********** **** ****
consensus_6388#0 GGATGTCGGAGGGCGGGAGGCGGCAGCTGCTGGAGGCGGCGGGGCCCGAGGCCGGGCCCG 820
consensus_6388#1 GGATGTCCAA---CGCGAAGCGCCGGCTGCTGGAGGCGAC----CCCG-----GGCTCCA 821
******* * ** ** *** * ************* * **** ** **
consensus_6388#0 TGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGGAGCGGCGACGTGAAGACGATCG 880
consensus_6388#1 AGGAGTTCAAGCCGGACGTGACGGTGGCGGCGGACGGCAGCGGCGACTTCAAGACCATCA 881
************************************ ********* * ***** ***
consensus_6388#0 GCGAGGCGGTGGCGAAGGTGCCCCCGAAGAACAAGGAGCGGTACACCATCTACGTGAAGG 940
consensus_6388#1 ATGAGGCGCTGGCCAAGGTGCCGGTCAAGAGCACGGGGACGTACGTGATGTACGTGAAGG 941
****** **** ******** **** ** ** * **** ** **********
consensus_6388#0 CCGGGACGTACAATGAGTACGTGTCGGTGGGGCGGCCGGCGACGAACGTGAACATGATAG 1000
consensus_6388#1 CCGGGACGTACAAGGAGTACGTGTCGGTGGCGCGCAACGTGACGAACCTGGTGATGATCG 1001
************* **************** *** * ******* ** ***** *
consensus_6388#0 GCGACGGCATCGGGAAGACCATCATCACGGGGAACAAGAACTTCAAGATGAACCTGACGA 1060
consensus_6388#1 GCGACGGCGCCACCAAGACCATCATCACGGGGAACAAGAGCTTCATGCTCAACATCACCA 1061
******** * ************************* ***** * * *** * ** *
consensus_6388#0 CCAAGGACACGGCGACGATGGAGGCGATCGGGAACGGCTTCTTCATGAGGGGGATCACGG 1120
consensus_6388#1 CCAAGGACACGGCCACCATGGAGGCGATCGGCAACGGGTTCTTCATGCGCGGCATCGGCG 1121
************* ** ************** ***** ********* * ** *** *
consensus_6388#0 TGGAGAACACGGCGGGGCCGGAGAACCACCAGGCGGTGGCTCTCCGCGCGCAGAGCGACA 1180
consensus_6388#1 TGGAGAACACGGCCGGGTCCAAGAACCACCAGGCGGTGGCGCTCCGCGTGCAGAGCGACC 1181
************* *** * ******************* ******* **********
consensus_6388#0 TGGCGGTGTTCTACCAGTGCGAGTTCGACGGGTACCAGGACACGCTGTACCCGCACGCGC 1240
consensus_6388#1 AGTCGGCGTTCTACGAGTGCCAGTTCGACGGGCACCAGGACACGCTCTACACCCACACCA 1241
* *** ******* ***** *********** ************* *** * *** *
consensus_6388#0 AGCGCCAGTTCTTCCGCGACTGCACAGTGTCGGGGACAATCGACTTCATATTCGGGAACT 1300
consensus_6388#1 GCAGGCAGTACTACCGCGACTGCACCATCACCGGCACCATCGACTTCATCTTCGGCAACG 1301
* **** ** ************ * * ** ** *********** ***** ***
consensus_6388#0 CGCAGGTTGTTCTTCAGAACTGCTTGCTCCAGCCTCGTAAGCCGATGGACAACCAGGTGA 1360
consensus_6388#1 CGCAGGTGGTGCTCCAGAACTGCCGGATCCAGGTGCGCCGGTGCATGGACAACCAGCAGA 1361
******* ** ** ********* * ***** ** * ************ **
consensus_6388#0 ACATCATAACGGCGCAGGGGCGGCGGGAGAAGAGGTCGGCGGGAGGGACGGTGATCCACA 1420
consensus_6388#1 ACATCGTGACGGCGCAGGGGCGCAAGGAGAAGCACTCCGCGGGCGGCACGGTGATCCACA 1421
***** * ************** ******* ** ***** ** *************
consensus_6388#0 ACTGCACGGTGGCGCCGCACCCGGACCTGGAGAAGTTCACGGACAAGGTGAAGACGTACC 1480
consensus_6388#1 ACTGCACCATCGAGCCGCACGAGGACTTCAAGGCCGACGCCGCCAAGTTCAAGACGTTCC 1481
******* * * ******* **** * ** * * * **** * ******* **
consensus_6388#0 TGGCGCGGCCGTGGAAGGAGTACTCGCGGACCATCTTCGTGCAGAACGAGATCGGGGCGG 1540
consensus_6388#1 TCGGCCGCCCGTGGAAGGAGTACTCGCGGACGCTCTACATCCAGTCCGACATCGGCGGGT 1541
* * ** *********************** *** * * *** *** ***** * *
consensus_6388#0 TGGTGGATCCGGTGGGGTGGCTGGAGTGGAACGGCAACTTCGCCCTGGACACCCTCTACT 1600
consensus_6388#1 TCATCGACCCGCAGGGGTGGCTGCCGTGGCTCGGCGACTTCGGCCTCAACACCTGCTACT 1601
* * ** *** ********** **** **** ****** *** ***** *****
consensus_6388#0 ACGCGGAGGTTGACAACCATGGCCCCGGCGCCGACATGAGCAAGCGCGCCAAGTGGAAGG 1660
consensus_6388#1 ACGCCGAGGTGGAGAACCGCGGCGACGGCGCCGACATGAGCAAGCGCGCCAAGTGGAGAG 1661
**** ***** ** **** *** ******************************** *
consensus_6388#0 GCGTCCAGTCCCTCACCTACCAGGACGTCCAGAAGGAGTTCACCGTGGAGGCCTTCATCC 1720
consensus_6388#1 GGGTCAAGACGGTCACGTACCAGCAGGCGCAGCAGAAGTACACCGTCGAGAGGTTCATCC 1721
* *** ** * **** ****** * * *** ** *** ****** *** *******
consensus_6388#0 AGGGCCAGGAGTTCATCCCCAAGTTCGGCGTCCCTTACATCCCCGGCCTTCTCCCCCAGA 1780
consensus_6388#1 AGGGACAGACGTGGCTCCCAAAGTTCGGCGTGCCGTTCATCCCCGGCCTGTTGCCGCAGG 1781
**** *** ** **** *********** ** * ************ * ** ***
consensus_6388#0 CGCAGCAGGGCAGGATGCACTAATTTTTCACTCCTGTACTATAACCATCATCGCCCCAGC 1840
consensus_6388#1 AGCAGTCAGGGAGGATACACTGATCCATCG----TGCGTCGTCTCGTCGGCCTATATATA 1837
**** ** ***** **** ** ** ** * * * *
consensus_6388#0 CCCCAGCCCGGACCTACGTACTACACACTATATATGGATCTTCGATCTCTCACTCACCTG 1900
consensus_6388#1 TGCTAGCGGGTAATTGTTTGCATCATGTTGC-TGTCG-TCGTCAACTCCTGTGATCTCTA 1895
* *** * * * * * ** * * * * ** ** * ** **
consensus_6388#0 CATCAATTGCCGGCCCCCATTATTTATTTTCATATACATATACTTGTTGTTATATATATA 1960
consensus_6388#1 TAGCGTTCTCTG-----CTGTACTCTAATCCATAGAAATGCATTCTTTTCTCCATAGA-A 1949
* * * * * * ** * * **** * ** * * ** * *** * *
consensus_6388#0 TATGCATCTCACACATTCCAACTGCAGTCGCCGCGGTTGATTAACTAAATTAGTAGCTCG 2020
consensus_6388#1 TTTGCGTA-CGCGTAGTACA-TTGCATATACTAGTACTACTTAATTATATTTACGTGTTG 2007
* *** * * * * * ** **** * * **** ** *** * *
consensus_6388#0 ATCATGGAACATGCATATGCATGGATCTCGATTGTTTTGGGACTGGATCCAAAATGTATA 2080
consensus_6388#1 --TACGGGTTGT---TACGAATCGATT---ATTGTTTTT--ACTG-ATCGACAAATGGTG 2056
* ** * ** * ** *** ******** **** *** * ** *
consensus_6388#0 TAATGTATATTCAATCTCTT---- 2100
consensus_6388#1 AAACTAATAGATAAGGTTTGACAG 2080
** *** ** * *
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||