cluster # 6390

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6390 cluster # 6390 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6390#0 length = 615 sequences # 4

consensusID : consensus_6390#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 615
fasta sequence

                              [TTTTTTTTGATTCGAAAATAAATTCAGATTTTTTTTCTCGGATACGAAAACGAATACAATAAGGGTGATATCC--GACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCA-AAAAAAAAAAACCCGAAACCCTAGCTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAGATCCACGCCGCCCACCGCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAGACTCCGCCGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCCACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAGATCCGGCGACGGCGCCGCCGGATCCGCCTGCCGTCGCCACCCACCGAAGCCGTCGCGGCAGTCGAGCCCGCTGCCTTCGCCCGTCGCAGCCCGCCGCGCGAGCCTGCCCGCCGCCGCCGCCCGTCGCCGCCCGCCGCGTGTTGCGCCGCTCTCGGCCGGCCGCCGGCTGCCGCGCGCCCCGCCCTGTGCCGCTGTGGATGAGGGAAG]

[-] EMBL CF326491             [TTTTTTTTGATTCGAAAATAAATTCAGATTTTTTTTCTCGGATACGAAAACGAATACAATAAGGGTGATATCC  GACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCAGAAAAAAAAAAACCCGAAACCCTAGCTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAGATCCACGCCGCCCACCGCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAGACTCCGCCGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCCACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAGATCCGGCGACGGCGCCGCCGGATCCGCCTGCCGT                                                                                                                                                                             ]
[+] EMBL CB662009             [                     ATTCAGATTTTTTTTCTCGGATACGAAAACGAATACAATAAGGGTGATATCC  GACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCA AAAAAAAAAAACCCGAAACCCTAGCTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAAATCCACGCCGCCCACCGCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAAACTCCGCCGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCCACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAAATCCGGCGACGGCGCCGCCGGATCCGCCTGCCGTCGCCACCCACCGAAGCCGTCGCGGCAGTCGAGCCCGCTGCCTTCGCCCGTCGCAGCCCGCCGCGCGAGCCTGCCCGCCGCCGCCGCCCGTCGCCGCCCGCCGCGTGTTGCGCCGCTCTCGGCCGGCCGCCGGCTGCCGCGCGCCCCGCCCTGTGCCGCTGTGGATGAGGGAAG]
[-] EMBL CB662008             [                      TTCAGATTTTTTTTCTCGGATACGAAAACGAATACAATAAGGGTGATATCC  GACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCA GAAAAAAAAAACCCGAAACCCTAGCTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAGATCCACGCCGCCCACCGCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAGACTCCGCCGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCCACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAGATCCGGCGACGGCGCCGCCGGATCCGCCTGCCGTCGCCACCCACCGAAGCCGTCGCGGCAGTCGAGCCCGCTGCCTTCGCCCGTCGCAGCCCGCCGCGCGAGCCTGCCCGCCGCCGCCGCCCGTCGCCGCCCGCCGCGTGTTGCGCCGCTCTCGGCCGGCCGCCGGCTGCCGCGCGCCCCGCCCTGTGCCGCTGTGGAT        ]
[+] EMBL D42664               [                                               AAACGAATATAATAAGGGTGATATCCGAGACGGAATAANCNGTTGAAAACTATCCGGACTTTTTTATCGGATATCCGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCA GAAAAAAAAAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_6390#0
TTTTTTTTGATTCGAAAATAAATTCAGATTTTTTTTCTCGGATACGAAAACGAATACAAT
AAGGGTGATATCCGACGGAATAAACGGTTGAAAACTATCCGGACTTTTTTATCGGATATC
CGGTAGTTTTCATGCTAGCAAAAAGGATATTTTTCAAAAAAAAAAAACCCGAAACCCTAG
CTGGCCGCGCCAGCTTCGCGCCGCCTACCGCCGGCCGGCGCCAGATCCACGCCGCCCACC
GCCGGCCTCCGCGCCGCCACGCGTGCACCGGCCGCCACCCACGCGCGCGCCAGACTCCGC
CGCCTTGCGCCGCAGCAGCCCTCTCCACCACCGACCGAGCCGCTCAACATGCGCCGCCCC
ACGGTGCCGCCGCCAGCACTCCGGCCGAAAGGCGGAGGGACTGGCTAGATCCGGCGACGG
CGCCGCCGGATCCGCCTGCCGTCGCCACCCACCGAAGCCGTCGCGGCAGTCGAGCCCGCT
GCCTTCGCCCGTCGCAGCCCGCCGCGCGAGCCTGCCCGCCGCCGCCGCCCGTCGCCGCCC
GCCGCGTGTTGCGCCGCTCTCGGCCGGCCGCCGGCTGCCGCGCGCCCCGCCCTGTGCCGC
TGTGGATGAGGGAAG

clustalw multiple alignements is not computed in this case