cluster # 6407

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Oryza sativa
cluster # 6407 cluster # 6407 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6407#0 length = 1895 sequences # 4
consensusID : consensus_6407#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1895
fasta sequence
                              [GCAGCAGCAGCTGATCCAGCTTCGTCGTCGTCGGCGATCGCCACCGGCAGCTAGGCAGTGACGGTGACAGTAGGAGGAGATCAGGATATGGACTGCTTCGCGGAGACGGAGGGGAAGAGGGCGCATGACCCGCTGTACCAGCGGCGCGCGGCGGCGGCGGCGACGCCGGCGACGGGGGTGCCGGTGGACGACGTGGACAAGGTGGTGGACGTGCCCGGGGCGGTGATCGTCGGCGCCGGGCCGGCGGGGGTGGCCGTGGGCGCCCTGCTGGGGCTGCGCGGCGTCGCCTACGTGGTGCTCGAGCGGTGCGGGTGCATCGCGTCGCTGTGGCGCCACCGCACGTACGACCGCCTCTGCCTCCACCTCCCCAAGCGCTTCTGCGAGCTCCCGCTCAGGCCGTTCCCGGCGAGCTTCCCGGAGTACCCGACGAGGGACCAGTTCCTCGGCTACCTCGACGCCTACGCGCGCGAGTTCGGCGTCGAGCCGGTGTTCCGGCGGGCGGTGATCAGCGCCGAGTACGACGGGGAGTCGTGGTGGGTGTACACCAGGGAGGTGGTCGCGGCGGCGGCCGGCGGCGAGCAGGCCGTCCTCGGGTGCACCATGACCGTGTACCGGAGCAGGTGGCTCGTCGTGGCCACCGGCGAGAACGCCGAGCCCGTCGTGCCGGAGATGGACGGCGCCGGGAGGTTCAAGGGCCAGATGATGCACTCCAGCGAGTACCGCAACGGCGACGGCTACGCCGGGAAGAAGGTCCTCGTCGTCGGCTGCGGCAACTCCGGCATGGAGGTGTCCCTCGACCTCTGCAACCACAATGCGCGCGCATCCATGGTGGTGCGCGACACGGTGCATGTCCTACCTAGAGAAATCCTGGGGTTCTCCACTTTCGGTCTGTCCATGTGGCTCCTCAGGTGGTTGTCTGTCCAAACGGTGGATTGGCTGGTACTCCTGTTGTCGTTCCTCGTGTTCGGTGATACGGCCCGCCTGGGCATCCCACGGCCCAGCCTTGGCCCCTTCGAGCTCAAGAGTGTGTCGGGTAAGACGCCGGTGCTCGACGTCGGAACCCTAGCCAAGATCAAGTCCGGGGACATCAAGGTGACCCCAGCAATACAATGTTTCCAAGAACATGGCGTGGAGTTTGTGGATGGCAGCACTGAAGAATTTGATGTTGTCATCCTGGCCACAGGATACAAAAGTAATGTGCCATA-TTGGTTAAAGGAGAAAGAATTCTTCTCAGAGAAAGATGGCTTCCCAAGAAAGGGAAATGCGTGGAAAGGGCAGAATGGCCTGTACGCTGTTGGTTTCTCAAGGCGTGGTCTCTCTGGAGTGTCCATGGACGCCAACAACATTGTGCAGGATATTGTGCAGCGTTTGCACGATATGGGCTATGAAAGAAGTGAGAACAACTGACATGGAATGGAACCCACTTGTTTTGATCAGAGCATTTTTCTTGTAGACACGTCATGTGCTGGTCTGGTTTACATTTCACCCTAATTAACAGGTAGATACAAGCCTGAAAAAAGCCATCAGGACAATCTACCAGTGCATATGCATGCATATACTTTGATCAGGCTAGTGCATCTCATTTTTTTCCCCAAACTCATAATGTATATAAGTCATGGTATAGGCAGTAATCATTTGTTGCATTTTTAGTGATATGATTTGGCCGGCCTAATTTTAACTGGAGGGAGTGAAAACTAGAGTATTGAGTTTGAGGGAGAATAGCATAATCAGTTTAGTTTTGGTCGCGCGTCTTTTTTGAGAAAGCTTTGATTTCATTTCCT-TTTTTTTTCATTTTGGCAATTGTTGTCATGTTATTTTGTAAGTGTCAATTGTAACAAACAACATTTGCAATAATCTATGCTCTGGTAGATTTTCTGTTCAAAAAAAAAAAAAAA]

[+] EMBL AK070386             [GCAGCAGCAGCTGATCCAGCTTCGTCGTCGTCGGCGATCGCCACCGGCAGCTAGGCAGTGACGGTGACAGTAGGAGGAGATCAGGATATGGACTGCTTCGCGGAGACGGAGGGGAAGAGGGCGCATGACCCGCTGTACCAGCGGCGCGCGGCGGCGGCGGCGACGCCGGCGACGGGGGTGCCGGTGGACGACGTGGACAAGGTGGTGGACGTGCCCGGGGCGGTGATCGTCGGCGCCGGGCCGGCGGGGGTGGCCGTGGGCGCCCTGCTGGGGCTGCGCGGCGTCGCCTACGTGGTGCTCGAGCGGTGCGGGTGCATCGCGTCGCTGTGGCGCCACCGCACGTACGACCGCCTCTGCCTCCACCTCCCCAAGCGCTTCTGCGAGCTCCCGCTCAGGCCGTTCCCGGCGAGCTTCCCGGAGTACCCGACGAGGGACCAGTTCCTCGGCTACCTCGACGCCTACGCGCGCGAGTTCGGCGTCGAGCCGGTGTTCCGGCGGGCGGTGATCAGCGCCGAGTACGACGGGGAGTCGTGGTGGGTGTACACCAGGGAGGTGGTCGCGGCGGCGGCCGGCGGCGAGCAGGCCGTCCTCGGGTGCACCATGACCGTGTACCGGAGCAGGTGGCTCGTCGTGGCCACCGGCGAGAACGCCGAGCCCGTCGTGCCGGAGATGGACGGCGCCGGGAGGTTCAAGGGCCAGATGATGCACTCCAGCGAGTACCGCAACGGCGACGGCTACGCCGGGAAGAAGGTCCTCGTCGTCGGCTGCGGCAACTCCGGCATGGAGGTGTCCCTCGACCTCTGCAACCACAATGCGCGCGCATCCATGGTGGTGCGCGACACGGTGCATGTCCTACCTAGAGAAATCCTGGGGTTCTCCACTTTCGGTCTGTCCATGTGGCTCCTCAGGTGGTTGTCTGTCCAAACGGTGGATTGGCTGGTACTCCTGTTGTCGTTCCTCGTGTTCGGTGATACGGCCCGCCTGGGCATCCCACGGCCCAGCCTTGGCCCCTTCGAGCTCAAGAGTGTGTCGGGTAAGACGCCGGTGCTCGACGTCGGAACCCTAGCCAAGATCAAGTCCGGGGACATCAAGGTGACCCCAGCAATACAATGTTTCCAAGAACATGGCGTGGAGTTTGTGGATGGCAGCACTGAAGAATTTGATGTTGTCATCCTGGCCACAGGATACAAAAGTAATGTGCCATA TTGGTTAAAGGAGAAAGAATTCTTCTCAGAGAAAGATGGCTTCCCAAGAAAGGGAAATGCGTGGAAAGGGCAGAATGGCCTGTACGCTGTTGGTTTCTCAAGGCGTGGTCTCTCTGGAGTGTCCATGGACGCCAACAACATTGTGCAGGATATTGTGCAGCGTTTGCACGATATGGGCTATGAAAGAAGTGAGAACAACTGACATGGAATGGAACCCACTTGTTTTGATCAGAGCATTTTTCTTGTAGACACGTCATGTGCTGGTCTGGTTTACATTTCACCCTAATTAACAGGTAGATACAAGCCTGAAAAAAGCCATCAGGACAATCTACCAGTGCATATGCATGCATATACTTTGATCAGGCTAGTGCATCTCATTTTTTTCCCCAAACTCATAATGTATATAAGTCATGGTATAGGCAGTAATCATTTGTTGCATTTTTAGTGATATGATTTGGCCGGCCTAATTTTAACTGGAGGGAGTGAAAACTAGAGTATTGAGTTTGAGGGAGAATAGCATAATCAGTTTAGTTTTGGTCGCGCGTCTTTTTTGAGAAAGCTTTGATTTCATTTCCT TTTTTTTTCATTTTGGCAATTGTTGTCATGTTATTTTGTAAGTGTCAATTGTAACAAACAACATTTGCAATAATCTATGCTCTGGTAGA                         ]
[+] EMBL C72123               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGTCCTACCTAGAGAAATCCTGGGGTTCTCCACTTTCGGTCTGTCCATGTGGCTCCTCAGGTGGTTGTCTGTCCAAACGGTGGATTGGCTGGTACTCCTGTTGTCGTTCCTCGTGTTCGGTGATACGGCCCGCCTGGGCATCCCACGGCCCAGCCTTGGCCCCTTCGAGCTCAAGAGTGTGTCGGGTAAGACGCCGGTGCTCGACGTCGGAACCCTAGCCAAGATCAAGTCCGGGGACATCAAGGTGACCCCAGCAATACAATGTTTCCAAGAACATGGCGTGGAGTTTGTGGATGGCAGCACTGAAGAATTTGATGTTGNCATCCTGGCCACANGATACAAAAGTAATGTGCCATATTTGGTTAAAGGAGAAAGAATTCTTCTCAGAGAAAGATGGCTTCCCAAGAAAGGG AATGCGTNGAAA GGCAG ATGGCCTGTACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CA759872             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CATA TTGGTTAAAGGAGAAAGAATTCTTCTCAGAGAAAGATGGCTTCCCAAGAAAGGGAAATGCGTGGAAAGGGCAGAATGGCCTGTACGCTGTTGGTTTCTCAAGGCGTGGTCTCTCTGGAGTGTCCATGGACGCCAACAACATTGTGCAGGATATTGTGCAGCGTTTGCACGATATGGGCTATGAAAGAAGTGAGAACAACTGACATGGAATGGAACCCACTTGTTTTGATCAGAGCATTTTTCTTGTAGGCACGTCATGTGCTGGTCTGGTTTACATTTCGCCCTAATTAACAGGTAGATACAAGCCTGAAAAAAGCCATCAGGACAATCTACCAGTGCATATGCATGCATATACTTTGATCAGGCTAGTGCATCTCA TTTTTTCCCCAAACTCATAATGTATATAAGTCATGGTATAGGCAGTAATCATTTGTTGCATTTTTAGTGATATGATTTGGCCGGCCTAATTTTAACTGGAGGGAGTGAAAACTAGAGTATTGAGTTTGAGGGAGAATAGCATAATCAGTTTAGTTTTGGTCGCGCGTCTTTTTTGAGAAAGCTTTGATTTCATTTCCT TTTTTTTTCATTTTGGCAATTGTTGTCATGTTATTTTGTAAGTGTCAATTGTAACAAACAACATTTGCAATAATCTATGCTTTGGTAGATTTTCTGTTCAAAAAAAAAAAAAAA]
[+] EMBL C73291               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGTCTGGTTTACATTTCACCCTAATTAACAGGTAGATACAAGCCTGAAAAAAGCCATCAGGACAATCTACCAGTGCATATGCATGCATATACTTTNATCAGGCTAGTGCATCTCATTTTTTTCCCCAAACTCATAATGTATATAAGTCATGGTATAGGCAGTAATCATTTGTNGCATTTTNAGTGATATGATTTGGCCGGCCTAATTTNAACTGGAGGGAGTGAAAACTAGAGTATTGAGTTTGAGGGAGAATAGCATAATCAGTTTAGTTTTGGTCGCGCGTCTTTTTTGAGAAAGCTTTGNTTTCATNTCCTGTTTTTTTTCATTTgn                                                                                                   ]




>consensus_6407#0
GCAGCAGCAGCTGATCCAGCTTCGTCGTCGTCGGCGATCGCCACCGGCAGCTAGGCAGTG
ACGGTGACAGTAGGAGGAGATCAGGATATGGACTGCTTCGCGGAGACGGAGGGGAAGAGG
GCGCATGACCCGCTGTACCAGCGGCGCGCGGCGGCGGCGGCGACGCCGGCGACGGGGGTG
CCGGTGGACGACGTGGACAAGGTGGTGGACGTGCCCGGGGCGGTGATCGTCGGCGCCGGG
CCGGCGGGGGTGGCCGTGGGCGCCCTGCTGGGGCTGCGCGGCGTCGCCTACGTGGTGCTC
GAGCGGTGCGGGTGCATCGCGTCGCTGTGGCGCCACCGCACGTACGACCGCCTCTGCCTC
CACCTCCCCAAGCGCTTCTGCGAGCTCCCGCTCAGGCCGTTCCCGGCGAGCTTCCCGGAG
TACCCGACGAGGGACCAGTTCCTCGGCTACCTCGACGCCTACGCGCGCGAGTTCGGCGTC
GAGCCGGTGTTCCGGCGGGCGGTGATCAGCGCCGAGTACGACGGGGAGTCGTGGTGGGTG
TACACCAGGGAGGTGGTCGCGGCGGCGGCCGGCGGCGAGCAGGCCGTCCTCGGGTGCACC
ATGACCGTGTACCGGAGCAGGTGGCTCGTCGTGGCCACCGGCGAGAACGCCGAGCCCGTC
GTGCCGGAGATGGACGGCGCCGGGAGGTTCAAGGGCCAGATGATGCACTCCAGCGAGTAC
CGCAACGGCGACGGCTACGCCGGGAAGAAGGTCCTCGTCGTCGGCTGCGGCAACTCCGGC
ATGGAGGTGTCCCTCGACCTCTGCAACCACAATGCGCGCGCATCCATGGTGGTGCGCGAC
ACGGTGCATGTCCTACCTAGAGAAATCCTGGGGTTCTCCACTTTCGGTCTGTCCATGTGG
CTCCTCAGGTGGTTGTCTGTCCAAACGGTGGATTGGCTGGTACTCCTGTTGTCGTTCCTC
GTGTTCGGTGATACGGCCCGCCTGGGCATCCCACGGCCCAGCCTTGGCCCCTTCGAGCTC
AAGAGTGTGTCGGGTAAGACGCCGGTGCTCGACGTCGGAACCCTAGCCAAGATCAAGTCC
GGGGACATCAAGGTGACCCCAGCAATACAATGTTTCCAAGAACATGGCGTGGAGTTTGTG
GATGGCAGCACTGAAGAATTTGATGTTGTCATCCTGGCCACAGGATACAAAAGTAATGTG
CCATATTGGTTAAAGGAGAAAGAATTCTTCTCAGAGAAAGATGGCTTCCCAAGAAAGGGA
AATGCGTGGAAAGGGCAGAATGGCCTGTACGCTGTTGGTTTCTCAAGGCGTGGTCTCTCT
GGAGTGTCCATGGACGCCAACAACATTGTGCAGGATATTGTGCAGCGTTTGCACGATATG
GGCTATGAAAGAAGTGAGAACAACTGACATGGAATGGAACCCACTTGTTTTGATCAGAGC
ATTTTTCTTGTAGACACGTCATGTGCTGGTCTGGTTTACATTTCACCCTAATTAACAGGT
AGATACAAGCCTGAAAAAAGCCATCAGGACAATCTACCAGTGCATATGCATGCATATACT
TTGATCAGGCTAGTGCATCTCATTTTTTTCCCCAAACTCATAATGTATATAAGTCATGGT
ATAGGCAGTAATCATTTGTTGCATTTTTAGTGATATGATTTGGCCGGCCTAATTTTAACT
GGAGGGAGTGAAAACTAGAGTATTGAGTTTGAGGGAGAATAGCATAATCAGTTTAGTTTT
GGTCGCGCGTCTTTTTTGAGAAAGCTTTGATTTCATTTCCTTTTTTTTTCATTTTGGCAA
TTGTTGTCATGTTATTTTGTAAGTGTCAATTGTAACAAACAACATTTGCAATAATCTATG
CTCTGGTAGATTTTCTGTTCAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case