cluster # 6433

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Oryza sativa
cluster # 6433 cluster # 6433 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6433#0 length = 929 sequences # 4
consensusID : consensus_6433#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 929
fasta sequence
                              [TTTTTATGAAGCAAAAACTCCGTTTTATATAAAAAAAAAGACACCGTTTATCAGTTCGACAAATATCCGTGAAGAAAACGAGCGATGAAAAAGAACACCGAAGCCACCGATCGAAACAGCCATTTTCATTAGCCGCTCTGCGTACACATACATAATAGAGAAAAGTACAGTACA-GGGCAACCAGGAGATAATCGATACAGTTCGTTCGTACTGGCAGCCAATTTGACCACAACCTGCTCAAGAATGCTTCCTCTCCCATTTCCCTTCTCGACGCTCCCTGCGTTCTACTACAACCTGCCTTGAGCTTGAGGACGACGACTTGCTG-CCCCCCGTGGGCCATGCCTCGTGCCAGC-TTCCAAAGCCGCCGCTGATTCTGGATCTCCGACGCTGCTGGCGTCACCAC-TTCCCTCAGCATTCTCCTCATAATAATTTCCTCCTGTG-CTAGTACGCTCGTCACTCGTAGTACGCTCTCGAGGTTGCTGCAGTATTGTAGGGAAGGTTGCCTGAAAATGATCTTGTCGCAGACCCACC-GGCCTCAACCCCTCCCACTCGGCTCCTTCCTTCCTGCTGTCCCCTACCGTCATCCCTTTCACGGTATCTCTCCCTAGACCGGCTGTTAGTATTGGCTGAAAACTCCCGCCTTGATGACCGCCCCAACTCAACTTGATCCAATTCTCGTTGAAGCTCTCTCTGAGTTTGTTTTTCTCTTTCCATATCGAGGTTAAATTGCAGTTCCCTAGAATTAACGCGCTCAAGATCCAGTTGTCGCTGTCTTTCGATTTCACGTTCCATCTCATGAGCACTTTCCCTATACAGATAACACAACAAAGAAATAGGGATAGGAACATTTATATTGTTTCTGACATGCTAAATGACAAAGGCAACAACTCTAAACCTGTCAAGTTCTTGCAAAAGTTCCATTTTCCTTG]

[-] EMBL BI805786             [TTTTTATGAAGCAAAAACTCCGTTTTATATAAAAAAAAAGACACCGTTTATCAGTTCGACAAATATCCGTGAAGAAAACGAGCGATGAAAAAGAACACCGAAGCCACCGATCGAAACAGCCATTTTCATTAGCCGCTCTGCGTACACATACATAATAGAGAAAAGTACAGTACA GGGCAACCAGGAGATAATCGATACAGTTCGTTCGTACTGGCAGCCAATTTGACCACAACCTGCTCAAGAATGCTTCCTCTCCCATTTCCCTTCTCGACGCTCCCTGCGTTCTACTACAACCTGCCTTGAGCTTGAGGACGACGA TTGCTG CCCCCCGTGGGCCATGCCTCGTGCCAG  TTCCAAAGCCGCCGCTGATTCTGGATCTCCGACGCTGCTGGCGTCACCAC TTCCCTCAGCATTCTCCTCATAATAATTTCCTCCTGTGACTAGTACGCTCGTCACTCGTAGTACGCTCTCGAGGTTGCTGCAGTATTGT GGGAAGGTTGCCTGAAAATGATCTTGTCG AGA CCA C GG CTCA  CCCTCACA                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF328858             [ TTTTTTGAAGCAAAAACTCTGTTTTATAT  AAAAAAAGACACCGTTTATCAGTTCGACAAATATCCGTGAAGAAAACGAGCGATGAAAAAGAACACCGAAGCCACCGATCGAAACAGCCATTTTCATTAGCCGCTCTGCGTACACATACATAATAGAGAAAAGTACAGTACA GGGCAACCAGGAGATAATCGATACAGTTCGTTCATACTGGCAGCCAATTTGACCACAACCTGCTCAAGAATGCTTCCTCTCCCATTTCCCTTCTCGACGCTCCCTGCGTTCTACTACAACCTGCCTTGAGCTTGAGGACGACGACTTGCTGCCCCCCCGTGGGCCATGCCTCGTGCCAGC TTCCAAAGCCGCCGCTGATTCTGGATCTCCGACGCTGCTGGCGTCACCAC TTCCCTCAGCATTCTCCTCATAATAATTTCCTCCTGTG CTAGTACGCTCGTCACTCGTAGTACGCTCTCGAGGTTGCTGCAGTATTGTAGGGAAGGTTGCCTGAAAATGATCTTGTCGCAGACCCACC GGCCTCAACCCCTCCACCTCGGCTCCTTCCTTCCTGCTGTCCCCTACCGTCA                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BI801836             [                                                                                                    ttttttttGATCGAAACAG CATTTTCATTAGCCG TCTG GTACACATACATAATAGAGAAAAGTACAGTACAGGGGCAA CAGGAGATAATCGATACAGTTCGTTCGTACTGGCAGGCAATTTGACCACAACCTG TCAAGAATG TTCCTCTCCCATTTCCCTTCTCGACGCTCCCTGCGTTCTACTACAACCTG CTTGAGCTTGAGGACGACGACTTGCTG CCCCCCGTGGGCCATGCCTCGTGCCAGCGTTCCAAAGCCG CGCTGATTCTGGATCTCCGACGCTGCTGGGGTCACCA  TTCCCTCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CF328857             [                                                                                                                                                                                                                                                                                                                                                                                                             CGTCACCACTTTCCCTCAGCATTCTCCTCATAATAATTTCCTCCTGTG CTAGTACGCTCGTCACTCGTAGTACGCTCTCGAGGTTGCTGCAGTATTGTA GGAAGGTTGCCTGAAAATGATCTTGTCGCAGACCCACCGGGCCTCAACCCCCTCCACTCGGCTCCTTCCTTCCTGCTGTCCCCTACCGTCATCCCTTTCACGGTATCTCTCCCTAGACCGGCTGTTAGTATTGGCTGAAAACTCCCGCCTTGATGACCGCCCCAACTCAACTTGATCCAATTCTCGTTGAAGCTCTCTCTGAGTTTGTTTTTCTCTTTCCATATCGAGGTTAAATTGCAGTTCCCTAGAATTAACGCGCTCAAGATCCAGTTGTCGCTGTCTTTCGATTTCACGTTCCATCTCATGAGCACTTTCCCTATACAGATAACACAACAAAGAAATAGGGATAGGAACATTTATATTGTTTCTGACATGCTAAATGACAAAGGCAACAACTCTAAACCTGTCAAGTTCTTGCAAAAGTTCCATTTTCCTTG]




>consensus_6433#0
TTTTTATGAAGCAAAAACTCCGTTTTATATAAAAAAAAAGACACCGTTTATCAGTTCGAC
AAATATCCGTGAAGAAAACGAGCGATGAAAAAGAACACCGAAGCCACCGATCGAAACAGC
CATTTTCATTAGCCGCTCTGCGTACACATACATAATAGAGAAAAGTACAGTACAGGGCAA
CCAGGAGATAATCGATACAGTTCGTTCGTACTGGCAGCCAATTTGACCACAACCTGCTCA
AGAATGCTTCCTCTCCCATTTCCCTTCTCGACGCTCCCTGCGTTCTACTACAACCTGCCT
TGAGCTTGAGGACGACGACTTGCTGCCCCCCGTGGGCCATGCCTCGTGCCAGCTTCCAAA
GCCGCCGCTGATTCTGGATCTCCGACGCTGCTGGCGTCACCACTTCCCTCAGCATTCTCC
TCATAATAATTTCCTCCTGTGCTAGTACGCTCGTCACTCGTAGTACGCTCTCGAGGTTGC
TGCAGTATTGTAGGGAAGGTTGCCTGAAAATGATCTTGTCGCAGACCCACCGGCCTCAAC
CCCTCCCACTCGGCTCCTTCCTTCCTGCTGTCCCCTACCGTCATCCCTTTCACGGTATCT
CTCCCTAGACCGGCTGTTAGTATTGGCTGAAAACTCCCGCCTTGATGACCGCCCCAACTC
AACTTGATCCAATTCTCGTTGAAGCTCTCTCTGAGTTTGTTTTTCTCTTTCCATATCGAG
GTTAAATTGCAGTTCCCTAGAATTAACGCGCTCAAGATCCAGTTGTCGCTGTCTTTCGAT
TTCACGTTCCATCTCATGAGCACTTTCCCTATACAGATAACACAACAAAGAAATAGGGAT
AGGAACATTTATATTGTTTCTGACATGCTAAATGACAAAGGCAACAACTCTAAACCTGTC
AAGTTCTTGCAAAAGTTCCATTTTCCTTG
clustalw multiple alignements is not computed in this case