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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 6444 cluster # 6444       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6444#0 length = 970 sequences # 4  

consensusID : consensus_6444#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 970
fasta sequence
                              [TTTGTAACCAACTCTTCCGCCGCCCCATCATTCCATTCAACAACCCAGAGCTCTGCTCCATTACCAAACTGAGTGTATCAACAAATTAATTACCAGTGCGCCTGCTTAAACATGATCAAACAAGAATACCTACCCACTCCCACTTCCAGCACACCTATGCCCAAAATTACTTCTACTACTTCCACCATAACAAATATAATATCCCTTCCCTAATTACACTTCAATGCAGTACCAAACTACACAACACACCCCCCCCCCCACCAAGAATTCCATTTAAGTGTCAAAAATAAAATGCCAAAACTACATCACAC-TATCACAATGAACAAATCCGATCTAATAACGATCAGTTACAAAAATGAATGAATAGGCAGGCAGCGCAGCACATGGAATGTTGACCAATTCCATGTGCTATATGCTATTCCGGACTCATCAAACTCTCAAGTCAATGTTGGAGTGGATTCAATGGGACAGCGCATCTCAGCTTCACCTCCTTTATGCCG-CATGCTATATGCTATTCCGGACTCTTCATCTCAAAGCTTTATTACAGCAAAGCAAATTAAAATATCATGTGTCCAGACTCCAGAGCCTGTGCCAATGCCTATGCCTATCCTGTCAGATCGCAACACAAATACCTGTACCATCTCATACTGTCTCCAAGCTGCCTTCCACGTTTCCAGTCACTAGTTAGTGAAGCAGAGTGAGCAATGTACAAATGCTACCAGGGGTTCTTATATTAGTCTACGTTGACGGAATCCTTTGGTGAAATGAGGTTGCATCAACTTGACATACAACCCATTCTTTTGCACCAGTGAATCATGCGTTCCCTGCTCAACTATCTTTCCGCCATTCAGAACAACAATGTTATCCACATGCTTCATCATTGCCGCCCTATGTGCAATGAGAATTGTCGTCTTATTCCCCATAATCAATGTGTCGAGGGCCTCCTGCACCACTCTACTGGACTCGNATT]

[-] EMBL AF522003             [TTTGTAACCAACTCTTCCGCCGCCCCATCATTCCATTCAACAACCCAGAGCTCTGCTCCATTACCAAACTGAGTGTATCAACAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF329325             [                                tttTTTAACAACCCAGAGCTTTGCTCCATTACCAAACTGAGTGTATCAACAAATTAATTACCAGTGCGCCTGCTTAAACATGATCAAACAAGAATACCTACCCACTCCCACTTCCAGCACACCTATGCCCAAAATTACTTCTACTACTTCCACCATAACAAATATAATATCCCTTCCCTAATTACACTTCAATGCAGTACCAAACTACACAACACACCCCCCCCCCCACCAAGAATTCCATTTAAGTGTCAAAAATAAAATGCCAAAACTACATCACAC TATCACAATGAACAAATCCGATCTAATAACGATCAGTTACAAAAATGAATGAATAGGCAGGCAGCGCAGCACATGGAATGTTGACCAATTCCATGTGCTATATGCTATTCCGGACTCATCAAACTCTCAAGTCAATGTTGGAGTGGATTCAATGGGACAGCGCATCTCAGCTTCACCTCCTTTATGCCG CATGCTATATGCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CF329324             [                                                                                                                                                                                                                                                                          ATTCCATTTAAGTGTCAAAAATAAAATGCCAAAACTACATCACACNTATCACAATGAACAAATCCGATCTAATAACGATCAGTTACAAAAATGAATGAATAGGCAGGCAGCGCAGCACATGGAATGTTGACCAATTCCATGTGCTATATGCTATTCCGGACTCATCAAACTCTCAAGTCAATGTTGGAGTGGATTCAATGGGACAGCGCATCTCAGCTTCACCTCCTTTATGCCG CATGCTATATGCTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA763029             [                                                                                                                                                                                                                                                                                               tttttTGCCAAAACTACATCACAC TATCACAATGAGCAAATCCGATCTAATAACGATCAGTTACAAAAATGAATGAATAGGCAGGCAGCGCAGCACATGGAATGTTGACCAATTCCATGTGCTATATGCTATTCCGGACTCATCAAACTCTCAAGTCAATGTTGGAGTGGATTCAATGAGACAGCGCATCTCAGCTTCACCTCCTTTATGCCGCCATGCTATATGCTATTCCGGACTCTTCATCTCAAAGCTTTATTACAGCAAAGCAAATTAAAATATCATGTGTCCAGACTCCAGAGCCTGTGCCAATGCCTATGCCTATCCTGTCAGATCGCAACACAAATACCTGTACCATCTCATACTGTCTCCAAGCTGCCTTCCACGTTTCCAGTCACTAGTTAGTGAAGCAGAGTGAGCAATGTACAAATGCTACCAGGGGTTCTTATATTAGTCTACGTTGACGGAATCCTTTGGTGAAATGAGGTTGCATCAACTTGACATACAACCCATTCTTTTGCACCAGTGAATCATGCGTTCCCTGCTCAACTATCTTTCCGCCATTCAGAACAACAATGTTATCCACATGCTTCATCATTGCCGCCCTATGTGCAATGAGAATTGTCGTCTTATTCCCCATAATCAATGTGTCGAGGGCCTCCTGCACCACTCTACTGGACTCGNATT]


>consensus_6444#0 TTTGTAACCAACTCTTCCGCCGCCCCATCATTCCATTCAACAACCCAGAGCTCTGCTCCA TTACCAAACTGAGTGTATCAACAAATTAATTACCAGTGCGCCTGCTTAAACATGATCAAA CAAGAATACCTACCCACTCCCACTTCCAGCACACCTATGCCCAAAATTACTTCTACTACT TCCACCATAACAAATATAATATCCCTTCCCTAATTACACTTCAATGCAGTACCAAACTAC ACAACACACCCCCCCCCCCACCAAGAATTCCATTTAAGTGTCAAAAATAAAATGCCAAAA CTACATCACACTATCACAATGAACAAATCCGATCTAATAACGATCAGTTACAAAAATGAA TGAATAGGCAGGCAGCGCAGCACATGGAATGTTGACCAATTCCATGTGCTATATGCTATT CCGGACTCATCAAACTCTCAAGTCAATGTTGGAGTGGATTCAATGGGACAGCGCATCTCA GCTTCACCTCCTTTATGCCGCATGCTATATGCTATTCCGGACTCTTCATCTCAAAGCTTT ATTACAGCAAAGCAAATTAAAATATCATGTGTCCAGACTCCAGAGCCTGTGCCAATGCCT ATGCCTATCCTGTCAGATCGCAACACAAATACCTGTACCATCTCATACTGTCTCCAAGCT GCCTTCCACGTTTCCAGTCACTAGTTAGTGAAGCAGAGTGAGCAATGTACAAATGCTACC AGGGGTTCTTATATTAGTCTACGTTGACGGAATCCTTTGGTGAAATGAGGTTGCATCAAC TTGACATACAACCCATTCTTTTGCACCAGTGAATCATGCGTTCCCTGCTCAACTATCTTT CCGCCATTCAGAACAACAATGTTATCCACATGCTTCATCATTGCCGCCCTATGTGCAATG AGAATTGTCGTCTTATTCCCCATAATCAATGTGTCGAGGGCCTCCTGCACCACTCTACTG GACTCGNATT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)