These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6444#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 970 fasta sequence [TTTGTAACCAACTCTTCCGCCGCCCCATCATTCCATTCAACAACCCAGAGCTCTGCTCCATTACCAAACTGAGTGTATCAACAAATTAATTACCAGTGCGCCTGCTTAAACATGATCAAACAAGAATACCTACCCACTCCCACTTCCAGCACACCTATGCCCAAAATTACTTCTACTACTTCCACCATAACAAATATAATATCCCTTCCCTAATTACACTTCAATGCAGTACCAAACTACACAACACACCCCCCCCCCCACCAAGAATTCCATTTAAGTGTCAAAAATAAAATGCCAAAACTACATCACAC-TATCACAATGAACAAATCCGATCTAATAACGATCAGTTACAAAAATGAATGAATAGGCAGGCAGCGCAGCACATGGAATGTTGACCAATTCCATGTGCTATATGCTATTCCGGACTCATCAAACTCTCAAGTCAATGTTGGAGTGGATTCAATGGGACAGCGCATCTCAGCTTCACCTCCTTTATGCCG-CATGCTATATGCTATTCCGGACTCTTCATCTCAAAGCTTTATTACAGCAAAGCAAATTAAAATATCATGTGTCCAGACTCCAGAGCCTGTGCCAATGCCTATGCCTATCCTGTCAGATCGCAACACAAATACCTGTACCATCTCATACTGTCTCCAAGCTGCCTTCCACGTTTCCAGTCACTAGTTAGTGAAGCAGAGTGAGCAATGTACAAATGCTACCAGGGGTTCTTATATTAGTCTACGTTGACGGAATCCTTTGGTGAAATGAGGTTGCATCAACTTGACATACAACCCATTCTTTTGCACCAGTGAATCATGCGTTCCCTGCTCAACTATCTTTCCGCCATTCAGAACAACAATGTTATCCACATGCTTCATCATTGCCGCCCTATGTGCAATGAGAATTGTCGTCTTATTCCCCATAATCAATGTGTCGAGGGCCTCCTGCACCACTCTACTGGACTCGNATT] [-] EMBL AF522003 [TTTGTAACCAACTCTTCCGCCGCCCCATCATTCCATTCAACAACCCAGAGCTCTGCTCCATTACCAAACTGAGTGTATCAACAAAT ] [+] EMBL CF329325 [ tttTTTAACAACCCAGAGCTTTGCTCCATTACCAAACTGAGTGTATCAACAAATTAATTACCAGTGCGCCTGCTTAAACATGATCAAACAAGAATACCTACCCACTCCCACTTCCAGCACACCTATGCCCAAAATTACTTCTACTACTTCCACCATAACAAATATAATATCCCTTCCCTAATTACACTTCAATGCAGTACCAAACTACACAACACACCCCCCCCCCCACCAAGAATTCCATTTAAGTGTCAAAAATAAAATGCCAAAACTACATCACAC TATCACAATGAACAAATCCGATCTAATAACGATCAGTTACAAAAATGAATGAATAGGCAGGCAGCGCAGCACATGGAATGTTGACCAATTCCATGTGCTATATGCTATTCCGGACTCATCAAACTCTCAAGTCAATGTTGGAGTGGATTCAATGGGACAGCGCATCTCAGCTTCACCTCCTTTATGCCG CATGCTATATGCTAT ] [-] EMBL CF329324 [ ATTCCATTTAAGTGTCAAAAATAAAATGCCAAAACTACATCACACNTATCACAATGAACAAATCCGATCTAATAACGATCAGTTACAAAAATGAATGAATAGGCAGGCAGCGCAGCACATGGAATGTTGACCAATTCCATGTGCTATATGCTATTCCGGACTCATCAAACTCTCAAGTCAATGTTGGAGTGGATTCAATGGGACAGCGCATCTCAGCTTCACCTCCTTTATGCCG CATGCTATATGCTATT ] [+] EMBL CA763029 [ tttttTGCCAAAACTACATCACAC TATCACAATGAGCAAATCCGATCTAATAACGATCAGTTACAAAAATGAATGAATAGGCAGGCAGCGCAGCACATGGAATGTTGACCAATTCCATGTGCTATATGCTATTCCGGACTCATCAAACTCTCAAGTCAATGTTGGAGTGGATTCAATGAGACAGCGCATCTCAGCTTCACCTCCTTTATGCCGCCATGCTATATGCTATTCCGGACTCTTCATCTCAAAGCTTTATTACAGCAAAGCAAATTAAAATATCATGTGTCCAGACTCCAGAGCCTGTGCCAATGCCTATGCCTATCCTGTCAGATCGCAACACAAATACCTGTACCATCTCATACTGTCTCCAAGCTGCCTTCCACGTTTCCAGTCACTAGTTAGTGAAGCAGAGTGAGCAATGTACAAATGCTACCAGGGGTTCTTATATTAGTCTACGTTGACGGAATCCTTTGGTGAAATGAGGTTGCATCAACTTGACATACAACCCATTCTTTTGCACCAGTGAATCATGCGTTCCCTGCTCAACTATCTTTCCGCCATTCAGAACAACAATGTTATCCACATGCTTCATCATTGCCGCCCTATGTGCAATGAGAATTGTCGTCTTATTCCCCATAATCAATGTGTCGAGGGCCTCCTGCACCACTCTACTGGACTCGNATT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||