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Oryza sativa
cluster # 6448 cluster # 6448       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6448#0 length = 1990 sequences # 2  
consensus_6448#1 length = 1621 sequences # 2  

consensusID : consensus_6448#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1990
fasta sequence
                              [CTCCCTTCCTACCCAACACGAGGCAGAGAGGAGAAGCTCCCCCCGCTCAACTCACCAAAACCCTCCTCCCCTCGAAATCCTTCCCAAGACGCCGCACGCTTCTCCATTTCATATAAGATTCCCGAGAGACGCCGCCGCCCGAGAGGCGTGGGCCGCGCGCGCCGAAACATATCCCGCCGGGGCGCCGCCATGGCCGGCGAGGTGGCCATCGACTCCGGCGAGAAGCGCCTCAACGAGCTCGGGTACAAGCAGGAGCTCCGCAGGGAGATGACTCTGTTCAAGACGCTGGCCATCTCCTTCTCGACGATGACGCTGTTCACCGGGATCACGCCGCTGTACGGGAGCAGCCTGCGGTACACGGGGCCGGCCAGCCTCGTCTGGGGCTGGGTCGTCGTCTCCTTCTTCACCTGGTTCGTCGGCTTCGCCATGGCCGAGATCTGCTCTTCCTTCCCCACCACTGGTTCTCTGTACTTTTGGGCTGCTCATCTGGCTGGCCCAGTCTGGGGCCCGTTGGCATCTTGGTGCTGTGCTTGGTTAGAGGCCATAGGTCTTATTGCCGGAATTGGTACACAGGCATTCGCGGGATCTCAAGTTCTGCAGAGCATAATCCTGCTATGCACCGGCACGAACAAAGGCGGCGGCTACCTGACCCCTCGCTGGCTGTTCCTCCTCATGTACATCGGCCTAACCTTCATCTGGGCCGTGCTCAACACCTTCGCGCTGGAAGTCATCGCCTTCCTCGACCTGATCTCGATGTGGTGGCAGGTGATCGGTGGCACGGTGATAGTGATCGTGCTGCCGCTGGTGGCGAAGACGACGCAGCCGGCGTCGTACGTGTTCACGCACTTCGAGACGGCGCCGGAGGCGACCGGGATACGGAGCAGCGCCTACGCCACCATCCTGTCCCTCCTGGTGAGCCAGTACTCCCTGTACGGCTACGACGCGGCGGCGCACCTCACCGAGGAGACCAAGGGCGCCGACAAGAACGGGCCCATCGCCATCCTCTCCAGCATCGGCATCATCACCGTCTTCGGCTGGGCCTACATCCTCGCCCTCACCTTCAGCATCCAGGACTTCAGCTACCTGTTCGACCCGAGCAACGAGACGGCCGGCACGTTCGTGCCGGCGCAGATCCTGTTCGACGCGTTCCACGGCCGGTACGGCTCCTCCGCGGGCGCCATCGCCCTCCTCTTCGTCATCTGGGGCTCCTTCTTCTTCGGCGGCCTCTCCATCACCACCAGCGCCGCGCGCGTCGTGTACGCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCGCCACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCTCCCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTGGGTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTCGCCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTGGATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAACTTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGTGCTCGACGCCAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGATGGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAAGTATGGTTTAGGTTGTTACTGGAGTACTTAGTTTGAGCAGATCATTAGCTCAAGCCAAATTGATCACATTCTCGATAGAGTTTTTTTTTTCCCTCTCTTGTGTTGTCTCCTACTTTGTTGTGTACGTGTACTATTCTGTGACACTATCAATGGGGTTAGTTTAGGATGTGGAGAAAACTTTGTGCCATATAGAATGACTTAAATTAGT]

[+] EMBL AK068521             [CTCCCTTCCTACCCAACACGAGGCAGAGAGGAGAAGCTCCCCCCGCTCAACTCACCAAAACCCTCCTCCCCTCGAAATCCTTCCCAAGACGCCGCACGCTTCTCCATTTCATATAAGATTCCCGAGAGACGCCGCCGCCCGAGAGGCGTGGGCCGCGCGCGCCGAAACATATCCCGCCGGGGCGCCGCCATGGCCGGCGAGGTGGCCATCGACTCCGGCGAGAAGCGCCTCAACGAGCTCGGGTACAAGCAGGAGCTCCGCAGGGAGATGACTCTGTTCAAGACGCTGGCCATCTCCTTCTCGACGATGACGCTGTTCACCGGGATCACGCCGCTGTACGGGAGCAGCCTGCGGTACACGGGGCCGGCCAGCCTCGTCTGGGGCTGGGTCGTCGTCTCCTTCTTCACCTGGTTCGTCGGCTTCGCCATGGCCGAGATCTGCTCTTCCTTCCCCACCACTGGTTCTCTGTACTTTTGGGCTGCTCATCTGGCTGGCCCAGTCTGGGGCCCGTTGGCATCTTGGTGCTGTGCTTGGTTAGAGGCCATAGGTCTTATTGCCGGAATTGGTACACAGGCATTCGCGGGATCTCAAGTTCTGCAGAGCATAATCCTGCTATGCACCGGCACGAACAAAGGCGGCGGCTACCTGACCCCTCGCTGGCTGTTCCTCCTCATGTACATCGGCCTAACCTTCATCTGGGCCGTGCTCAACACCTTCGCGCTGGAAGTCATCGCCTTCCTCGACCTGATCTCGATGTGGTGGCAGGTGATCGGTGGCACGGTGATAGTGATCGTGCTGCCGCTGGTGGCGAAGACGACGCAGCCGGCGTCGTACGTGTTCACGCACTTCGAGACGGCGCCGGAGGCGACCGGGATACGGAGCAGCGCCTACGCCACCATCCTGTCCCTCCTGGTGAGCCAGTACTCCCTGTACGGCTACGACGCGGCGGCGCACCTCACCGAGGAGACCAAGGGCGCCGACAAGAACGGGCCCATCGCCATCCTCTCCAGCATCGGCATCATCACCGTCTTCGGCTGGGCCTACATCCTCGCCCTCACCTTCAGCATCCAGGACTTCAGCTACCTGTTCGACCCGAGCAACGAGACGGCCGGCACGTTCGTGCCGGCGCAGATCCTGTTCGACGCGTTCCACGGCCGGTACGGCTCCTCCGCGGGCGCCATCGCCCTCCTCTTCGTCATCTGGGGCTCCTTCTTCTTCGGCGGCCTCTCCATCACCACCAGCGCCGCGCGCGTCGTGTACGCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCGCCACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCTCCCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTGGGTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTCGCCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTGGATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAACTTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGTGCTCGACGCCAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGATGGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAAGTATGGTTTAGGTTGTTACTGGAGTACTTAGTTTGAGCAGATCATTAGCTCAAGCCAAATTGATCACATTCTCGATAGAGTTTTTTTTTTCCCTCTCTTGTGTTGTCTCCTACTTTGTTGTGTACGTGTACTATTCTGTGACACTATCAATGGGGTTAGTTTAGGATGTGGAGAAAACTTTGTGCCATATAGAATGACTTAAATTAGT]
[+] EMBL CB677144             [                    AGGCACAGAGGAGAAGCTCCCCCCGCTCAACTCACCAAAACCCTCCTCCCCTCGAAATCCTTCCCAAGACGCCGCACGCTTCTCCATTTCATATAAGATTCCCGAGAGACGCCGCCGCCCGAGAGGCGTGGGCCGCGCGCGCCGAAACATATCCCGCCGGGGCGCCGCCATGGCCGGCGAGGTGGCCATCGACTCCGGCGAGAAGCGCCTCAACGAGCTCGGGTACAAGCAGGAGCTCCGCAGGGAGATGACTCTGTTCAAGACGCTGGCCATCTCCTTCTCGACGATGACGCTGTTCACCGGGATCACGCCGCTGTACGGGAGCAGCCTGCGGTACACGGGGCCGGCCAGCCTCGTCTGGGGCTGGGTCGTCGTCTCCTTCTTCACCTGGTTCGTCGGCTTCGCCATGGCCGAGATCTGCTCTTCCTTCCCCACCACTGGTTCTCTGTACTTTTGGGCTGCTCATCTGGCTGGCCCAGTCTGGGGCCCGTTGGCATCTTGGTGCTGTGCTTGGTTAGAGGCCATAGGTCTTATTGCCGGAATTGGTACACAGGCATTCGCGGGATCTCAAGTTCTGCAGAGCATAATCCTGCTATGCACCGGCACGAACAAAGGCGGCGGCTACCTGACCCCTCGCTGGCTGTTCCTCCTCATGTACATCGGCCTAACCTTCATCTGGGCCGTGCTCAACACCTTCGCGCTGGAAGTCATCGCCTTCCTCGACCTGATCTCGATGTGGTGGCAGGTGATCGGTGGCACGGTGATAGTGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_6448#0 CTCCCTTCCTACCCAACACGAGGCAGAGAGGAGAAGCTCCCCCCGCTCAACTCACCAAAA CCCTCCTCCCCTCGAAATCCTTCCCAAGACGCCGCACGCTTCTCCATTTCATATAAGATT CCCGAGAGACGCCGCCGCCCGAGAGGCGTGGGCCGCGCGCGCCGAAACATATCCCGCCGG GGCGCCGCCATGGCCGGCGAGGTGGCCATCGACTCCGGCGAGAAGCGCCTCAACGAGCTC GGGTACAAGCAGGAGCTCCGCAGGGAGATGACTCTGTTCAAGACGCTGGCCATCTCCTTC TCGACGATGACGCTGTTCACCGGGATCACGCCGCTGTACGGGAGCAGCCTGCGGTACACG GGGCCGGCCAGCCTCGTCTGGGGCTGGGTCGTCGTCTCCTTCTTCACCTGGTTCGTCGGC TTCGCCATGGCCGAGATCTGCTCTTCCTTCCCCACCACTGGTTCTCTGTACTTTTGGGCT GCTCATCTGGCTGGCCCAGTCTGGGGCCCGTTGGCATCTTGGTGCTGTGCTTGGTTAGAG GCCATAGGTCTTATTGCCGGAATTGGTACACAGGCATTCGCGGGATCTCAAGTTCTGCAG AGCATAATCCTGCTATGCACCGGCACGAACAAAGGCGGCGGCTACCTGACCCCTCGCTGG CTGTTCCTCCTCATGTACATCGGCCTAACCTTCATCTGGGCCGTGCTCAACACCTTCGCG CTGGAAGTCATCGCCTTCCTCGACCTGATCTCGATGTGGTGGCAGGTGATCGGTGGCACG GTGATAGTGATCGTGCTGCCGCTGGTGGCGAAGACGACGCAGCCGGCGTCGTACGTGTTC ACGCACTTCGAGACGGCGCCGGAGGCGACCGGGATACGGAGCAGCGCCTACGCCACCATC CTGTCCCTCCTGGTGAGCCAGTACTCCCTGTACGGCTACGACGCGGCGGCGCACCTCACC GAGGAGACCAAGGGCGCCGACAAGAACGGGCCCATCGCCATCCTCTCCAGCATCGGCATC ATCACCGTCTTCGGCTGGGCCTACATCCTCGCCCTCACCTTCAGCATCCAGGACTTCAGC TACCTGTTCGACCCGAGCAACGAGACGGCCGGCACGTTCGTGCCGGCGCAGATCCTGTTC GACGCGTTCCACGGCCGGTACGGCTCCTCCGCGGGCGCCATCGCCCTCCTCTTCGTCATC TGGGGCTCCTTCTTCTTCGGCGGCCTCTCCATCACCACCAGCGCCGCGCGCGTCGTGTAC GCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCGC CACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCTC CCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTGG GTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTCG CCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTGG ATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAAC TTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGTG CTCGACGCCAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGAT GGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAAGTATGGTTTAGGTTGTTA CTGGAGTACTTAGTTTGAGCAGATCATTAGCTCAAGCCAAATTGATCACATTCTCGATAG AGTTTTTTTTTTCCCTCTCTTGTGTTGTCTCCTACTTTGTTGTGTACGTGTACTATTCTG TGACACTATCAATGGGGTTAGTTTAGGATGTGGAGAAAACTTTGTGCCATATAGAATGAC TTAAATTAGT



consensusID : consensus_6448#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1621
fasta sequence
                              [ACATCCGACTGTAAATTATCCTAAAATATGTCGACATAAATTTAGCAATATCGATTTTTTTTTTTGTTGCCTGTGCGATCGCACATCTCGCACTTGCCCTAGGAATGGCCTGACATGAACTCTGTTCCTGTGTGTGCGCAGGACTTCAGCTACCTGTTCGACCCGAGCAACGAGACGGCCGGCACGTTCGTGCCGGCGCAGATCCTGTTCGACGCGTTCCACGGCCGGTACGGCTCCTCCGCGGGCGCCATCGCCCTCCTCTTCGTCATCTGGGGCTCCTTCTTCTTCGGCGGCCTCTCCATCACCACCAGCGCCGCGCGCGTCGTGTACGCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCGCCACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCTCCCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTGGGTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTCGCCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTGGATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAACTTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGTGCTCGACGCCAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGATGGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAAGTATGGTTTAGGTTGTTACTGGAGTACTTAGTTTGAGCAGATCATTAGCTCAAGCCAAATTGATCACATTCTCGATAGAGTTTTTTTTTCCCTCTCTTGTGTTGTCTCCTACTTTGTTGTGTACGTGTACTATTCTGTGACACTATCAATGGGGTTAGTTTAGGATGTGGAGAAAACTTTGTGCCATATAGAATGACTTAAATTAGTTACATGTATCACATACTTAGAACAGAGCACGCAAGCATTATGAAGACACAAACTAAATTAAATTGTATTAGCTTGGAGGAGGAGGAAGGAGCACCGAAGAACGATAGGCATGACAGGCATCGGGAAAACACCGAAACACATGCTTAAGTGCTTAACCCCTGAATTCAGAAGAGAGGCTGTGTTGGGGCTTTCCTCCACGGTCTCATGCCAACCGCTCTTGGACACACATTTCCCCCTCTTCCCCGGCTCACTTCCAATTTTCTCAAAGGCATCTATCATCGATCAAAATTTTGTGTGTGTTGTATGTTTGTTTACTGTGCTAAGAAAATTATATCAGCAAAAAAAAGGAAGAGGAAGGAAGTTCCAAGAACGATAGGAATGGGAGGCATCGAGAAAACATAAGAGCGAAATCTCCACCTGCAACATTCTAGCGAATGGGAGGGGATGGATAGATGGATAGAGCTCATGCTTTCTCATATGTTCCCAGTCCTACTACTCTTGGAGCCTCTCTTTCTTCCTCTTCCCAAGCTCACCAAAGGCCTGAGGCTACAACTACAAGAGT]

[-] EMBL AK107452             [ACATCCGACTGTAAATTATCCTAAAATATGTCGACATAAATTTAGCAATATCGATTTTTTTTTTTGTTGCCTGTGCGATCGCACATCTCGCACTTGCCCTAGGAATGGCCTGACATGAACTCTGTTCCTGTGTGTGCGCAGGACTTCAGCTACCTGTTCGACCCGAGCAACGAGACGGCCGGCACGTTCGTGCCGGCGCAGATCCTGTTCGACGCGTTCCACGGCCGGTACGGCTCCTCCGCGGGCGCCATCGCCCTCCTCTTCGTCATCTGGGGCTCCTTCTTCTTCGGCGGCCTCTCCATCACCACCAGCGCCGCGCGCGTCGTGTACGCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCGCCACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCTCCCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTGGGTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTCGCCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTGGATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAACTTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGTGCTCGACGCCAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGATGGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAAGTATGGTTTAGGTTGTTACTGGAGTACTTAGTTTGAGCAGATCATTAGCTCAAGCCAAATTGATCACATTCTCGATAGAGTTTTTTTTTCCCTCTCTTGTGTTGTCTCCTACTTTGTTGTGTACGTGTACTATTCTGTGACACTATCAATGGGGTTAGTTTAGGATGTGGAGAAAACTTTGTGCCATATAGAATGACTTAAATTAGTTACATGTATCACATACTTAGAACAGAGCACGCAAGCATTATGAAGACACAAACTAAATTAAATTGTATTAGCTTGGAGGAGGAGGAAGGAGCACCGAAGAACGATAGGCATGACAGGCATCGGGAAAACACCGAAACACATGCTTAAGTGCTTAACCCCTGAATTCAGAAGAGAGGCTGTGTTGGGGCTTTCCTCCACGGTCTCATGCCAACCGCTCTTGGACACACATTTCCCCCTCTTCCCCGGCTCACTTCCAATTTTCTCAAAGGCATCTATCATCGATCAAAATTTTGTGTGTGTTGTATGTTTGTTTACTGTGCTAAGAAAATTATATCAGCAAAAAAAAGGAAGAGGAAGGAAGTTCCAAGAACGATAGGAATGGGAGGCATCGAGAAAACATAAGAGCGAAATCTCCACCTGCAACATTCTAGCGAATGGGAGGGGATGGATAGATGGATAGAGCTCATGCTTTCTCATATGTTCCCAGTCCTACTACTCTTGGAGCCTCTCTTTCTTCCTCTTCCCAAGCTCACCAAAGGCCTGAGGCTACAACTACAAGAGT]
[-] EMBL CB677145             [                                                                                                                                                                                                                                                                                                                    CAGCGCCGCGCGCGTCGTGTACGCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCGCCACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCTCCCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTGGGTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTCGCCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTGGATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAACTTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGTGCTCGACGCTAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGATGGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAAGTATGGTTTAGGTTGTTACTGGAGTACTTAGTTTGAGCAGATCATTAGCTCAAGCCAAATTGATCACATTCTCGATAGAGTTTTTTTTTCCCTCTCTTGTGTTGTCTCCTACTTTGTTGTGTACGTGTACTATTCTGTGACACTATCAATGGGGTTAGTTTAGGATGTGGAGAAAACTTTGTGCCATATAGAATGACTTAAATTAGTTACATGTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_6448#1 ACATCCGACTGTAAATTATCCTAAAATATGTCGACATAAATTTAGCAATATCGATTTTTT TTTTTGTTGCCTGTGCGATCGCACATCTCGCACTTGCCCTAGGAATGGCCTGACATGAAC TCTGTTCCTGTGTGTGCGCAGGACTTCAGCTACCTGTTCGACCCGAGCAACGAGACGGCC GGCACGTTCGTGCCGGCGCAGATCCTGTTCGACGCGTTCCACGGCCGGTACGGCTCCTCC GCGGGCGCCATCGCCCTCCTCTTCGTCATCTGGGGCTCCTTCTTCTTCGGCGGCCTCTCC ATCACCACCAGCGCCGCGCGCGTCGTGTACGCGCTGTCCCGCGACCGCGGCGTCCCGCTC TCCTCCGTGTGGCGCCGCGTCCACCCGCGCCACCGCGTCCCCGCCAACGCCGTCTGGCTC TGCGCCGCCGCGTGCGCGCTGCTGGGCCTCCCCATCCTGTGGATCAACGTCGTCTTCACG GCCATCACGTCGATCGCAACCATCGGCTGGGTCGGCGGCTACGCCGTGCCCATCTTCGCC CGCATGGTGATGCGGGAGGAGGACTTCTCGCCGGGGCCCTTCTACCTCCGGCGCGCGTCG CGGCCGGTGTGCCTCGTCGCGTTCCTGTGGATCTGCTACACCTGCACCGTGTTCCTCCTC CCGACGGCGTACCCGATCAGCGCCGGCAACTTCAACTACGCCCCCGTCGCGCTCGGCGCC TGCCTCGGCCTCATCGGGCTCTGGTGGGTGCTCGACGCCAGGAGGTGGTTCAAGGGACCC GTCAGGAACATCGACGATCCTCTGAAAGATGGTGGTGGTGATGGCGTCCATAACAATGGC AACAAGGTCTAAGTATGGTTTAGGTTGTTACTGGAGTACTTAGTTTGAGCAGATCATTAG CTCAAGCCAAATTGATCACATTCTCGATAGAGTTTTTTTTTCCCTCTCTTGTGTTGTCTC CTACTTTGTTGTGTACGTGTACTATTCTGTGACACTATCAATGGGGTTAGTTTAGGATGT GGAGAAAACTTTGTGCCATATAGAATGACTTAAATTAGTTACATGTATCACATACTTAGA ACAGAGCACGCAAGCATTATGAAGACACAAACTAAATTAAATTGTATTAGCTTGGAGGAG GAGGAAGGAGCACCGAAGAACGATAGGCATGACAGGCATCGGGAAAACACCGAAACACAT GCTTAAGTGCTTAACCCCTGAATTCAGAAGAGAGGCTGTGTTGGGGCTTTCCTCCACGGT CTCATGCCAACCGCTCTTGGACACACATTTCCCCCTCTTCCCCGGCTCACTTCCAATTTT CTCAAAGGCATCTATCATCGATCAAAATTTTGTGTGTGTTGTATGTTTGTTTACTGTGCT AAGAAAATTATATCAGCAAAAAAAAGGAAGAGGAAGGAAGTTCCAAGAACGATAGGAATG GGAGGCATCGAGAAAACATAAGAGCGAAATCTCCACCTGCAACATTCTAGCGAATGGGAG GGGATGGATAGATGGATAGAGCTCATGCTTTCTCATATGTTCCCAGTCCTACTACTCTTG GAGCCTCTCTTTCTTCCTCTTCCCAAGCTCACCAAAGGCCTGAGGCTACAACTACAAGAG T



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6448#0      CTCCCTTCCTACCCAACACGAGGCAGAGAGGAGAAGCTCCCCCCGCTCAACTCACCAAAA 60
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      CCCTCCTCCCCTCGAAATCCTTCCCAAGACGCCGCACGCTTCTCCATTTCATATAAGATT 120
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      CCCGAGAGACGCCGCCGCCCGAGAGGCGTGGGCCGCGCGCGCCGAAACATATCCCGCCGG 180
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      GGCGCCGCCATGGCCGGCGAGGTGGCCATCGACTCCGGCGAGAAGCGCCTCAACGAGCTC 240
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      GGGTACAAGCAGGAGCTCCGCAGGGAGATGACTCTGTTCAAGACGCTGGCCATCTCCTTC 300
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      TCGACGATGACGCTGTTCACCGGGATCACGCCGCTGTACGGGAGCAGCCTGCGGTACACG 360
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      GGGCCGGCCAGCCTCGTCTGGGGCTGGGTCGTCGTCTCCTTCTTCACCTGGTTCGTCGGC 420
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      TTCGCCATGGCCGAGATCTGCTCTTCCTTCCCCACCACTGGTTCTCTGTACTTTTGGGCT 480
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      GCTCATCTGGCTGGCCCAGTCTGGGGCCCGTTGGCATCTTGGTGCTGTGCTTGGTTAGAG 540
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      GCCATAGGTCTTATTGCCGGAATTGGTACACAGGCATTCGCGGGATCTCAAGTTCTGCAG 600
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      AGCATAATCCTGCTATGCACCGGCACGAACAAAGGCGGCGGCTACCTGACCCCTCGCTGG 660
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      CTGTTCCTCCTCATGTACATCGGCCTAACCTTCATCTGGGCCGTGCTCAACACCTTCGCG 720
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      CTGGAAGTCATCGCCTTCCTCGACCTGATCTCGATGTGGTGGCAGGTGATCGGTGGCACG 780
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      GTGATAGTGATCGTGCTGCCGCTGGTGGCGAAGACGACGCAGCCGGCGTCGTACGTGTTC 840
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      ACGCACTTCGAGACGGCGCCGGAGGCGACCGGGATACGGAGCAGCGCCTACGCCACCATC 900
consensus_6448#1      ------------------------------------------------------------
                                                                                  

consensus_6448#0      CTGTCCCTCCTGGTGAGCCAGTACTCCCTGTACGGCTACGACGCGGCGGCGCACCTCACC 960
consensus_6448#1      ---------------------------ACATCCGACTGTAAATTATCCTAAAATATGTCG 33
                                                    * ** **   *     *     *  *  * 

consensus_6448#0      GAGGAGACCAAGGGCGCCGACAAGAACGGGCCCATCGCCATCCTCTCCAGCATCGGCATC 1020
consensus_6448#1      ACATAAATTTA--GCAATATC--GATTTTTTTTTTTGTTGCCTGTGCGATCGCACATCTC 89
                          * *   *  **     *  **         * *    *    * * *       **

consensus_6448#0      ATCACCGTCTTCGGCTGGGCCT-ACATCCTCGCCCTCACCTTCAGCATCCAGGACTTCAG 1079
consensus_6448#1      GCACTTGCCCTAGGAATGGCCTGACATGAACTCTGTTCCTGTGTGTGCGCAGGACTTCAG 149
                            * * * **   ***** ****   * *  *  *  *  *    ***********

consensus_6448#0      CTACCTGTTCGACCCGAGCAACGAGACGGCCGGCACGTTCGTGCCGGCGCAGATCCTGTT 1139
consensus_6448#1      CTACCTGTTCGACCCGAGCAACGAGACGGCCGGCACGTTCGTGCCGGCGCAGATCCTGTT 209
                      ************************************************************

consensus_6448#0      CGACGCGTTCCACGGCCGGTACGGCTCCTCCGCGGGCGCCATCGCCCTCCTCTTCGTCAT 1199
consensus_6448#1      CGACGCGTTCCACGGCCGGTACGGCTCCTCCGCGGGCGCCATCGCCCTCCTCTTCGTCAT 269
                      ************************************************************

consensus_6448#0      CTGGGGCTCCTTCTTCTTCGGCGGCCTCTCCATCACCACCAGCGCCGCGCGCGTCGTGTA 1259
consensus_6448#1      CTGGGGCTCCTTCTTCTTCGGCGGCCTCTCCATCACCACCAGCGCCGCGCGCGTCGTGTA 329
                      ************************************************************

consensus_6448#0      CGCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCG 1319
consensus_6448#1      CGCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCG 389
                      ************************************************************

consensus_6448#0      CCACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCT 1379
consensus_6448#1      CCACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCT 449
                      ************************************************************

consensus_6448#0      CCCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTG 1439
consensus_6448#1      CCCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTG 509
                      ************************************************************

consensus_6448#0      GGTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTC 1499
consensus_6448#1      GGTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTC 569
                      ************************************************************

consensus_6448#0      GCCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTG 1559
consensus_6448#1      GCCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTG 629
                      ************************************************************

consensus_6448#0      GATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAA 1619
consensus_6448#1      GATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAA 689
                      ************************************************************

consensus_6448#0      CTTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGT 1679
consensus_6448#1      CTTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGT 749
                      ************************************************************

consensus_6448#0      GCTCGACGCCAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGA 1739
consensus_6448#1      GCTCGACGCCAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGA 809
                      ************************************************************

consensus_6448#0      TGGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAAGTATGGTTTAGGTTGTT 1799
consensus_6448#1      TGGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAAGTATGGTTTAGGTTGTT 869
                      ************************************************************

consensus_6448#0      ACTGGAGTACTTAGTTTGAGCAGATCATTAGCTCAAGCCAAATTGATCACATTCTCGATA 1859
consensus_6448#1      ACTGGAGTACTTAGTTTGAGCAGATCATTAGCTCAAGCCAAATTGATCACATTCTCGATA 929
                      ************************************************************

consensus_6448#0      GAGTTTTTTTTTTCCCTCTCTTGTGTTGTCTCCTACTTTGTTGTGTACGTGTACTATTCT 1919
consensus_6448#1      GAGTTTTTTTTT-CCCTCTCTTGTGTTGTCTCCTACTTTGTTGTGTACGTGTACTATTCT 988
                      ************ ***********************************************

consensus_6448#0      GTGACACTATCAATGGGGTTAGTTTAGGATGTGGAGAAAACTTTGTGCCATATAGAATGA 1979
consensus_6448#1      GTGACACTATCAATGGGGTTAGTTTAGGATGTGGAGAAAACTTTGTGCCATATAGAATGA 1048
                      ************************************************************

consensus_6448#0      CTTAAATTAGT------------------------------------------------- 1990
consensus_6448#1      CTTAAATTAGTTACATGTATCACATACTTAGAACAGAGCACGCAAGCATTATGAAGACAC 1108
                      ***********                                                 

consensus_6448#0      ------------------------------------------------------------
consensus_6448#1      AAACTAAATTAAATTGTATTAGCTTGGAGGAGGAGGAAGGAGCACCGAAGAACGATAGGC 1168
                                                                                  

consensus_6448#0      ------------------------------------------------------------
consensus_6448#1      ATGACAGGCATCGGGAAAACACCGAAACACATGCTTAAGTGCTTAACCCCTGAATTCAGA 1228
                                                                                  

consensus_6448#0      ------------------------------------------------------------
consensus_6448#1      AGAGAGGCTGTGTTGGGGCTTTCCTCCACGGTCTCATGCCAACCGCTCTTGGACACACAT 1288
                                                                                  

consensus_6448#0      ------------------------------------------------------------
consensus_6448#1      TTCCCCCTCTTCCCCGGCTCACTTCCAATTTTCTCAAAGGCATCTATCATCGATCAAAAT 1348
                                                                                  

consensus_6448#0      ------------------------------------------------------------
consensus_6448#1      TTTGTGTGTGTTGTATGTTTGTTTACTGTGCTAAGAAAATTATATCAGCAAAAAAAAGGA 1408
                                                                                  

consensus_6448#0      ------------------------------------------------------------
consensus_6448#1      AGAGGAAGGAAGTTCCAAGAACGATAGGAATGGGAGGCATCGAGAAAACATAAGAGCGAA 1468
                                                                                  

consensus_6448#0      ------------------------------------------------------------
consensus_6448#1      ATCTCCACCTGCAACATTCTAGCGAATGGGAGGGGATGGATAGATGGATAGAGCTCATGC 1528
                                                                                  

consensus_6448#0      ------------------------------------------------------------
consensus_6448#1      TTTCTCATATGTTCCCAGTCCTACTACTCTTGGAGCCTCTCTTTCTTCCTCTTCCCAAGC 1588
                                                                                  

consensus_6448#0      ---------------------------------
consensus_6448#1      TCACCAAAGGCCTGAGGCTACAACTACAAGAGT 1621
                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)