cluster # 6449

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Oryza sativa
cluster # 6449 cluster # 6449 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6449#0 length = 1232 sequences # 4
consensusID : consensus_6449#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1232
fasta sequence
                              [TGTCGTGTATCCGTCTTCCCCTCTGCGTCGAAGGAAATCTCCCGTCTCGTCGTCGCTCCTTGCGCCGATCTCCATCCCGCGAGTCGCGAGCAGAGAGCAGGGGAGGGGAGGGGAGGGGCGCAGTCACCCGTCCTGCTGCATCCTGACTATGCTCTTTCTAATAGAGGTAACATAGTTGGATGGATGATGTTTATGGAAGGATAGAGGTCTTCCCCCAGCACTTCTTACCATCACAACAATCCATGGAGACCCCTGCTGATGGTCTCTCCACAAGTAAGACTAACCTGGATTCTCCACCAAGTTCACGTAGACGTTCCTGGACTCCGAAACGAGTAATGGGAGCTGCATCACTTTTGCATTTATTGTCTCTTCCTCGCATAAGATGGTCTTCCAGCACTGA-GGATGATGACAAGATTGAGCTAACCAGAGCTGAAG-TAGAATCATTAAGAACCGAGATTGC-TGATGCTGAAGAGA-GGGAATCTCAGTTAAAAGCT-CGGTTGGAAAATATTGATGAAGTTTTGAGATATGCACGGCTCTCTGGGTATCTCTATATTAGAAGTAGATGGACTCAACTTCCTGGAGAGCCACCTATTCTAGATGATGCTGATGTCGATGATTGGCTTCCTCGGTTTGTTGTTCTGCAAGGGCAATGTGTATACTATTATCTTAAATCTACAGATCTAAGTCCACAAGAATCCACACTGCTGTGTGATATTGTGGAAGTGGGACAGCTTCCGAACTTTGTGCCAGAAGATGAGAAAACAAGATACGCATTCTACATAATGACCCAGTC-AGGTTTGAAGTTTGAATGCTCGAGCATGTCTGAGATACAGGTGGATTCATGGGTGAGAGCGATAAGAGGAGATTGCGGATTGTCTGACGGTGGTGAGAGTAGGAGCAAGACAAGCAGGCAAGAAGTTGGGTCATGGTAATCAATCCTTGTTCTTGAAGGGCGTACACATTAAGATGTATTATGCAGTGATGTACAGTAGATAAGTCGAGAAAATATATAGTGAAAAACTTGGAAACTAGCATAAGATGTAAAAAGATGTCCATTTTTTAATCTTACGATAGTTTTCAGGTTTTAAGTAGATAGGTGGTTTTTTTTTTCCCATAGAGAAGCGAATGCCTGTGCTGATAGCAACTATGTGTGGATACATGTAAATGGGCAAAGTGTAAGACATTGCATATGTATGTGGTGATACATGTAAATGGGCAAGTGTAAGACATTT]

[+] EMBL CB673922             [TGTCGTGTATCCGTCTTCCCCTCTGCGTCGAAGGAAATCTCCCGTCTCGTCGTCGCTCCTTGCGCCGATCTCCATCCCGCGAGTCGCGAGCAGAGAGCAGGGGAGGGGAGGGGAGGGGCGCAGTCACCCGTCCTGCTGCATCCTGACTATGCTCTTTCTAATAGAGGTAACATAGTTGGATGGATGATGTTTATGGAAGGATAGAGGTCTTCCCCCAGCACTTCTTACCATCACAACAATCCATGGAGACCCCTGCTGATGGTCTCTCCACAAGTAAGACTAACCTGGATTCTCCACCAAGTTCACGTAGACGTTCCTGGACTCCGAAACGAGTAATGGGAGCTGCATCACTTTTGCATTTATTGTCTCTTCCTCGCATAAGATGGTCTTCCAGCACTGA GGATGATGACAAGATTGAGCTAACCAGAGCTGAAG TAGAATCATTAAGAACCGAGATTGC TGATGCTGAAGAGA GGGAATCTCAGTTAAAAGCT CGGTTGGAAAATATTGATGAAGTTTTGAGATATGCACGGCTCTCTGGGTATCTCTATATTAGAAGTAGATGGACTCAACTTCCTGGAGAGCCACCTATTCTAGATGATGCTGATGTCGATGATTGGCTTCCTCGGTTTGTTGTTCTGCAAGGGCAATGTGTATACTATTATCTTAAATCTACAGATCTAAGTCCACAAGAATCCACACTGCTGTGTGATATTGTGGAAGTGGGACAGCTTCCGAACTTTGTGCCAGAAGATGAGAAAACAAGATACGCATTCTACATAATGACCCAGTC AGGTTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C26569               [                                                     CGCTCCTTGCGCCGATCTCCATCCCGCGAGTCGCGAGCAGAGAGCAGGGGAGGGGAGGGGAGGGGCGCAGTCACCCGTCCTGCTGCATCCTGACTATGCTCTTTCTAATAGAGGTAACATAGTTGGATGGATGATGTTTATGGAAGGATAGAGGTCTTCCCCCAGCACTTCTTACCATCACAACAATCCATGGAGACCCCTGCTGATGGTCTCTCCACAAGTAAGACTAACCTGGATTCTCCACCAAGTTCACGTAGACGTTCCTGGACTCCGAAACGAGTAATGGGAGCTGCATCACTTTTGCATTTATTGTCTCTTCCTCGCATAAGATGGTCTTCCAGCACTGAGGGATGATGACAAGATTGAGCTAACCAGAGCTGAAGTTGGGATCATTAAGNACCGAGATTTCTTGATCCTNAAGGGAGGGGATTTTCAGTTAAAAGCTCCGGTTNGGAAATATTtnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA763629             [                                                                                                                                                                                                                                                                                                                                           AGTAATGGGAGCTGCATCACTTTTGCATTTATTGTCTCTTCCTCGCATAAGATGGTCTTCCAGCACTGA GGATGATGACAAGATTGAGCTAACCAGAGCTGAAG TAGAATCATTAAGAACCGAGATTGC TGATGCTGAAGAGA GGGAATCTCAGTTAAAAGCT CGGTTGGAAAATATTGATGAAGTTTTGAGATATGCACGGCTCTCTGGGTATCTCTATATTAGAAGTAGATGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB673923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGC TGATGCTGAAGAGA GGGAATCTCAGTTAAAAGCT CGGTTGGAAAATATTGATGAAGTTNTGAGATATGCACGGCTCTCTGGGTATCTCTATATTAGAAGTAGATGGACTCAACTTCCTGGAGAGCCACCTATTCTAGATGATGCTGATGTCGATGATTGGCTTCCTCGGTTTGTTGTTCTGCAAGGGCAATGTGTATACTATTATCTTAAATCTACAGATCTAAGTCCACAAGAATCCACACTGCTGTGTGATATTGTGGAAGTGGGACAGCTTCCGAACTTTGTGCCAGAAGATGAGAAAACAAGATACGCATTCTACATAATGA CCAGTCAAGGTTTGAAGTTTGAATGCTCGAGCATGTCTGAGATACAGGTGGATTCATGGGTGAGAGCGATAAGAGGAGATTGCGGATTGTCTGACGGTGGTGAGAGTAGGAGCAAGACAAGCAGGCAAGAAGTTGGGTCATGGTAATCAATCCTTGTTCTTGAAGGGCGTACACATTAAGATGTATTATGCAGTGATGTACAGTAGATAAGTCGAGAAAATATATAGTGAAAAACTTGGAAACTAGCATAAGATGTAAAAAGATGTCCATTTTTTAATCTTACGATAGTTTTCAGGTTTTAAGTAGATAGGTGGTTTTTTTTTTCCCATAGAGAAGCGAATGCCTGTGCTGATAGCAACTATGTGTGGATACATGTAAATGGGCAAAGTGTAAGACATTGCATATGTATGTGGTGATACATGTAAATGGGCAAGTGTAAGACATTT]




>consensus_6449#0
TGTCGTGTATCCGTCTTCCCCTCTGCGTCGAAGGAAATCTCCCGTCTCGTCGTCGCTCCT
TGCGCCGATCTCCATCCCGCGAGTCGCGAGCAGAGAGCAGGGGAGGGGAGGGGAGGGGCG
CAGTCACCCGTCCTGCTGCATCCTGACTATGCTCTTTCTAATAGAGGTAACATAGTTGGA
TGGATGATGTTTATGGAAGGATAGAGGTCTTCCCCCAGCACTTCTTACCATCACAACAAT
CCATGGAGACCCCTGCTGATGGTCTCTCCACAAGTAAGACTAACCTGGATTCTCCACCAA
GTTCACGTAGACGTTCCTGGACTCCGAAACGAGTAATGGGAGCTGCATCACTTTTGCATT
TATTGTCTCTTCCTCGCATAAGATGGTCTTCCAGCACTGAGGATGATGACAAGATTGAGC
TAACCAGAGCTGAAGTAGAATCATTAAGAACCGAGATTGCTGATGCTGAAGAGAGGGAAT
CTCAGTTAAAAGCTCGGTTGGAAAATATTGATGAAGTTTTGAGATATGCACGGCTCTCTG
GGTATCTCTATATTAGAAGTAGATGGACTCAACTTCCTGGAGAGCCACCTATTCTAGATG
ATGCTGATGTCGATGATTGGCTTCCTCGGTTTGTTGTTCTGCAAGGGCAATGTGTATACT
ATTATCTTAAATCTACAGATCTAAGTCCACAAGAATCCACACTGCTGTGTGATATTGTGG
AAGTGGGACAGCTTCCGAACTTTGTGCCAGAAGATGAGAAAACAAGATACGCATTCTACA
TAATGACCCAGTCAGGTTTGAAGTTTGAATGCTCGAGCATGTCTGAGATACAGGTGGATT
CATGGGTGAGAGCGATAAGAGGAGATTGCGGATTGTCTGACGGTGGTGAGAGTAGGAGCA
AGACAAGCAGGCAAGAAGTTGGGTCATGGTAATCAATCCTTGTTCTTGAAGGGCGTACAC
ATTAAGATGTATTATGCAGTGATGTACAGTAGATAAGTCGAGAAAATATATAGTGAAAAA
CTTGGAAACTAGCATAAGATGTAAAAAGATGTCCATTTTTTAATCTTACGATAGTTTTCA
GGTTTTAAGTAGATAGGTGGTTTTTTTTTTCCCATAGAGAAGCGAATGCCTGTGCTGATA
GCAACTATGTGTGGATACATGTAAATGGGCAAAGTGTAAGACATTGCATATGTATGTGGT
GATACATGTAAATGGGCAAGTGTAAGACATTT
clustalw multiple alignements is not computed in this case