cluster # 6461

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Oryza sativa
cluster # 6461 cluster # 6461 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6461#0 length = 2026 sequences # 4
consensusID : consensus_6461#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2026
fasta sequence
                              [CACAAGCTTACACTGGAAGCGGGGTCACTGCTCATTCAGATAGGTTCAAAGATTTCCAGAGAAGCTTGACCAAAACTTTTCCCGGAGTATGGGCGCCGCTCCCACCGGCCACCACGCATGGCGCGCCACGGAAGCCCCGCTCGAGCGGACCATCCCCACGCGGCGCCCATGCGCCTCACCCGCGCGTCGTCGCGGCGTCACGTAGCGCAGGCAAGCCAGTTCGCCGCGGATTGTCGTGAGGGCTTCTTTTTGACCTCGTTCCCTACCTCCATCCATCCACGCACGCCGCCCCCCACATTGGGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAGGGAAGGTAAAACAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTCACGCATCCTAGACCTTGCTTGGC-AGTTACGACATCAACTGACACGATTAATAGAACATGTGTTTGGGTATATTGATTGGATCCCAGAACATCATGGATTCCAGTTCTCTCCTTGTTATAAAAGATCATTACCTGCCACCGAAAGATACATCCGTGGAGAGGCTCCCTTGCTGTCTGTCAGTAATTCTACAGAAGACCAGACCCCAAATGGACTATCTGAAGCCATTGTTGTCAGAAAAGGCTTGTCCAGTATTTGTCAAAGGTTTCCCAGTTTTTTGCATGACTTCAGATTGGGACAACAGTTGGCATTCCATTTGCGAGAACTGTGCAGTGCTGTTGCAAGTGAAATTCATGCTAAACTAGCTAGGTTCTTACATCGTTTCTGGACAACATTACAGGGATCTTCTAAAGATATAGGATGGCTAAAAAGAACAAAAACATTGCCTTGTTCAGTTGATGGTACAGATCGTTTCAAGGAGCTTTTGTATGGCATCAGAAATGGCATGCATCATCTTCCTAACACACTGGTTTACTTATTCATCCCTGGACTTTTTAGTAATCACAGTCCACTTTACTTCGTCAATACGAAAAGAATCTTTTCGAAGATGGGGCTTACTTGCCATATTGCAAGGATTCATAGTGAGGCATCAGTGGAGAAAAATGCACGGGAACTGAAATTATACATTGAAGAGCTGTACTGGGGTTCTGGTAAACAGGTGTTGCTCCTGGGCCATAGCAAAGGTGGAGTTGATGCGGCTGCGGCGCTTTCGTTGTACTGGTCTGAACTCAAGGGCAAGGTTGCCGGACTGGCATTGGTTCAGAGCCCATATGGTGGCACCCCAATAGCTTCCGACATCCTTCGCAAAGGCCAGATTGCTGATAAGGAGACAAGGAGGATCATGGAACTGATAATATGCAAACTCATCAAGGGTGATATAAGGGCCTTGGAGGATCTCACATATGACAAGAGAAGGGACTTCATCTCCAAGCACAAGCT-CCCCGTGGACGAACTGCCGATCATCTCCTTCCACACCGAGGCCAGCACCG-CCCCGACGATGCTCGTGACATTG-TCG-CGCGTCG-CCCAAGCCGAGCTCCTCCCATGGCTCCCATTGCCGCGGTTCCTGTCGTCAT-CGGAGTACGCCGAATCGTTGCTCGCCTCTCTGAAGCTCCCCGTGGTCGTGCCGG-CCTCGGCGGCCATGGCCGTCAGCGCGCTCCACCTGAGGCTGCGCTACGGCGAGAGGAGCGACGGCCTGGTGACGCGGCGGGACGCCGAGGTGCCC-GGGTCGGTGGTGGTGAGGCCGGAGAGGAGGCTGGACCATGCGTGGATGGTGCACTCCACGCTGAGAAAGGATCATGCCGAGGCTGATGCCACTCAGATGTGTGAAGCCCTGATGGCCATGCTCGTTGAGATTGGGAGGAAGAAATGCTGCTGATCATAATCTTACAGTTTCTTGGTTAAATTCAAGTTTGAACTTGAGTTTAAACCAAACTTAGGATCCAATGCCATAATCATAGATGATGTTACAAGGCAGTTTACAAATACAGAATGATTTCCACTTTGAAGGACCAATATAAAATGCTCTTTATTTCCCCCGAAAAAAAAAAAA]

[+] EMBL CB656395             [CACAAGCTTACACTGGAAGCGGGGTCACTGCTCATTCAGATAGGTTCAAAGATTTCCAGAGAAGCTTGACCAAAACTTTTCCCGGAGTATGGGCGCCGCTCCCACCGGCCACCACGCATGGCGCGCCACGGAAGCCCCGCTCGAGCGGACCATCCCCACGCGGCGCCCATGCGCCTCACCCGCGCGTCGTCGCGGCGTCACGTAGCGCAGGCAAGCCAGTTCGCCGCGGATTGTCGTGAGGGCTTCTTTTTGACCTCGTTCCCTACCTCCATCCATCCACGCACGCCGCCCCCCACATTGGGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAG    GGTAAAACAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTCACGCATCCTAGACCTTGCTTGGC AGTTACGACATCAACTGACACGATTAATAGAACATGTGTTTGGGTATATTGATTGGATCCCAGAACATCATGGATTCCAGTTCTCTCCTTGTTATAAAAGATCATTACCTGCCACCGAAAGATACATCCGTGGAGAGGCTCCCTTGCTGTCTGTCAGTAATTCTACAGAAGACCAGACCCCAAATGGACTATCTGAAGCCATTGTTGTCAGAAAAGGCTTGTCCAGTATTTGTCAAAGGTTTCCCAGTTTTTTGCATGACTTCAGATTGGGACAACAGTTGGCATTCCATTTGCGAGAACTGTGCAGTGCTGTTGCAAGTGAAATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSS14879A            [                                                         AGAGAAGCTTGACCAAAACTTTTCCCGGAGTATGGGCGCCGCTCCCACCGGCCACCACGCATGGCGCGCCACGGAAGCCCCGCTCGAGCGGACCATCCCCACGCGGCGCCCATGCG CTCACCCGCGCGTCGTCGCGGCGTCACGTAGCGCAGGCAAGCCAGTTCGCCGCGGATTGTCGTGAGGGCTTCTTTTTGACCTCGTTCCCTACCTCCATCCATCCACGCACGCNGCCCCCCACATTGGGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAGGGAAGGTAAAACAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTCACGNATCCTAGACCTTGCTTGGCAATTTACGACATCAACTGACACGATTAATAGAACATGTGTTTGGGTATATTGATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK103170             [                                                                                                                                                                                                                                                GGCTTCTTTTTGACCTCGTTCCCTACCCCCATCCATCCACGCACGCCGCCCCCCACATTGGGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAGGGAAGGTAAAACAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTCACGCATCCTAGACCTTGCTTGGC AGTTACGACATCAACTGACACGATTAATAGAACATGTGTTTGGGTATATTGATTGGATCCCAGAACATCATGGATTCCAGTTCTCTCCTTGTTATAAAAGATCATTACCTGCCACCGAAAGATACATCCGTGGAGAGGCTCCCTTGCTGTCTGTCAGTAATTCTACAGAAGACCAGACCCCAAATGGACTATCTGAAGCCATTGTTGTCAGAAAAGGCTTGTCCAGTATTTGTCAAAGGTTTCCCAGTTTTTTGCATGACTTCAGATTGGGACAACAGTTGGCATTCCATTTGCGAGAACTGTGCAGTGCTGTTGCAAGTGAAATTCATGCTAAACTAGCTAGGTTCTTACATCGTTTCTGGACAACATTACAGGGATCTTCTAAAGATATAGGATGGCTAAAAAGAACAAAAACATTGCCTTGTTCAGTTGATGGTACAGATCGTTTCAAGGAGCTTTTGTATGGCATCAGAAATGGCATGCATCATCTTCCTAACACACTGGTTTACTTATTCATCCCTGGACTTTTTAGTAATCACAGTCCACTTTACTTCGTCAATACGAAAAGAATCTTTTCGAAGATGGGGCTTACTTGCCATATTGCAAGGATTCATAGTGAGGCATCAGTGGAGAAAAATGCACGGGAACTGAAATTATACATTGAAGAGCTGTACTGGGGTTCTGGTAAACAGGTGTTGCTCCTGGGCCATAGCAAAGGTGGAGTTGATGCGGCTGCGGCGCTTTCGTTGTACTGGTCTGAACTCAAGGGCAAGGTTGCCGGACTGGCATTGGTTCAGAGCCCATATGGTGGCACCCCAATAGCTTCCGACATCCTTCGCAAAGGCCAGATTGCTGATAAGGAGACAAGGAGGATCATGGAACTGATAATATGCAAACTCATCAAGGGTGATATAAGGGCCTTGGAGGATCTCACATATGACAAGAGAAGGGACTTCATCTCCAAGCACAAGCT CCCCGTGGACGAACTGCCGATCATCTCCTTCCACACCGAGGCCAGCACCG CCCCGACGATGCTCGTGACATTG TCG CGCGTCG CCCAAGCCGAGCTCCTCCCATGGCTCCCATTGCCGCGGTTCCTGTCGTCAT CGGAGTACGCCGAATCGTTGCTCGCCTCTCTGAAGCTCCCCGTGGTCGTGCCGG CCTCGGCGGCCATGGCCGTCAGCGCGCTCCACCTGAGGCTGCGCTACGGCGAGAGGAGCGACGGCCTGGTGACGCGGCGGGACGCCGAGGTGCCC GGGTCGGTGGTGGTGAGGCCGGAGAGGAGGCTGGACCATGCGTGGATGGTGCACTCCACGCTGAGAAAGGATCATGCCGAGGCTGATGCCACTCAGATGTGTGAAGCCCTGATGGCCATGCTCGTTGAGATTGGGAGGAAGAAATGCTGCTGATCATAATCTTACAGTTTCTTGGTTAAATTCAAGTTTGAACTTGAGTTTAAACCAAACTTAGGATCCAATGCCATAATCATAGATGATGTTACAAGGCAGTTTACAAATACAGAATGATTTCCACTTTGAAGGACCAATATAAAATGCTCTTT                      ]
[+] EMBL AU089766             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGNTCCCCCGTGGACGAA TGCCGATCATCTCCTTCCACACCGAGGCCAGCACCGCCCCCGACGATGCTCGTGACATTGTTCGCCGCGTCGCCCCAAGCCGAGCTCCTCCCATGGCTCCCATTGCCGCGGTTCCTGTCGTCATCCGGAGTACGCCGAATCGTTGCTCGCCTCTCTGAAGCTCCCCGTGGTCGTGCCGGCCCTCGGCGGCCATGGCCGTCAGCGCGCTCCACCTGAAGGTGCGCTACGGCGAGAGGAGCGACGGCCTGGTGACGCGGCGGGACGCCGA GTGCCCGGGGTCGGTGGTGGTGAGGCCGGAGAGGAGGCTGGACCATGCGTGGATGGTGCACTCCACGCTGAGAAAGGATCATGCCGAGGCTGATGCCACTCAGATGTGTGAAGCCCTGATGGCCATGCTCGTTGAGATTGGGAGGAAGAAATGCTGCTGATCATAATCTTACAGTTTCTTGGTTAAATTCAAGTTTGAACTTGAGTTTAAACCAAACTTAGGATCCAATGCCATAATCATAGATGATGTTACAAGGCAGTTTACAAATACAGAATGATTTCCACTTTGAAGGACCAATATAAAATGCTCTTTATTTCCCCCGAAAAAAAAAAAA]




>consensus_6461#0
CACAAGCTTACACTGGAAGCGGGGTCACTGCTCATTCAGATAGGTTCAAAGATTTCCAGA
GAAGCTTGACCAAAACTTTTCCCGGAGTATGGGCGCCGCTCCCACCGGCCACCACGCATG
GCGCGCCACGGAAGCCCCGCTCGAGCGGACCATCCCCACGCGGCGCCCATGCGCCTCACC
CGCGCGTCGTCGCGGCGTCACGTAGCGCAGGCAAGCCAGTTCGCCGCGGATTGTCGTGAG
GGCTTCTTTTTGACCTCGTTCCCTACCTCCATCCATCCACGCACGCCGCCCCCCACATTG
GGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAGGGAAGGTAAAA
CAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTC
ACGCATCCTAGACCTTGCTTGGCAGTTACGACATCAACTGACACGATTAATAGAACATGT
GTTTGGGTATATTGATTGGATCCCAGAACATCATGGATTCCAGTTCTCTCCTTGTTATAA
AAGATCATTACCTGCCACCGAAAGATACATCCGTGGAGAGGCTCCCTTGCTGTCTGTCAG
TAATTCTACAGAAGACCAGACCCCAAATGGACTATCTGAAGCCATTGTTGTCAGAAAAGG
CTTGTCCAGTATTTGTCAAAGGTTTCCCAGTTTTTTGCATGACTTCAGATTGGGACAACA
GTTGGCATTCCATTTGCGAGAACTGTGCAGTGCTGTTGCAAGTGAAATTCATGCTAAACT
AGCTAGGTTCTTACATCGTTTCTGGACAACATTACAGGGATCTTCTAAAGATATAGGATG
GCTAAAAAGAACAAAAACATTGCCTTGTTCAGTTGATGGTACAGATCGTTTCAAGGAGCT
TTTGTATGGCATCAGAAATGGCATGCATCATCTTCCTAACACACTGGTTTACTTATTCAT
CCCTGGACTTTTTAGTAATCACAGTCCACTTTACTTCGTCAATACGAAAAGAATCTTTTC
GAAGATGGGGCTTACTTGCCATATTGCAAGGATTCATAGTGAGGCATCAGTGGAGAAAAA
TGCACGGGAACTGAAATTATACATTGAAGAGCTGTACTGGGGTTCTGGTAAACAGGTGTT
GCTCCTGGGCCATAGCAAAGGTGGAGTTGATGCGGCTGCGGCGCTTTCGTTGTACTGGTC
TGAACTCAAGGGCAAGGTTGCCGGACTGGCATTGGTTCAGAGCCCATATGGTGGCACCCC
AATAGCTTCCGACATCCTTCGCAAAGGCCAGATTGCTGATAAGGAGACAAGGAGGATCAT
GGAACTGATAATATGCAAACTCATCAAGGGTGATATAAGGGCCTTGGAGGATCTCACATA
TGACAAGAGAAGGGACTTCATCTCCAAGCACAAGCTCCCCGTGGACGAACTGCCGATCAT
CTCCTTCCACACCGAGGCCAGCACCGCCCCGACGATGCTCGTGACATTGTCGCGCGTCGC
CCAAGCCGAGCTCCTCCCATGGCTCCCATTGCCGCGGTTCCTGTCGTCATCGGAGTACGC
CGAATCGTTGCTCGCCTCTCTGAAGCTCCCCGTGGTCGTGCCGGCCTCGGCGGCCATGGC
CGTCAGCGCGCTCCACCTGAGGCTGCGCTACGGCGAGAGGAGCGACGGCCTGGTGACGCG
GCGGGACGCCGAGGTGCCCGGGTCGGTGGTGGTGAGGCCGGAGAGGAGGCTGGACCATGC
GTGGATGGTGCACTCCACGCTGAGAAAGGATCATGCCGAGGCTGATGCCACTCAGATGTG
TGAAGCCCTGATGGCCATGCTCGTTGAGATTGGGAGGAAGAAATGCTGCTGATCATAATC
TTACAGTTTCTTGGTTAAATTCAAGTTTGAACTTGAGTTTAAACCAAACTTAGGATCCAA
TGCCATAATCATAGATGATGTTACAAGGCAGTTTACAAATACAGAATGATTTCCACTTTG
AAGGACCAATATAAAATGCTCTTTATTTCCCCCGAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case