cluster # 6486

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Oryza sativa
cluster # 6486 cluster # 6486 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6486#0 length = 1704 sequences # 4
consensusID : consensus_6486#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1704
fasta sequence
                              [TGCTTTAATTTATTTACCTTACATTTTGCTACTCACATAAACTTTGTTCCAGAAACATTGTTTGAAAATATGGTGATTTTTTTAACTATTGTTGATAAAAACTTGGTGCTGTTATGGACCTGGCCTGATCTGTGGTGGCGAATGAGTGAGGGGATGGCATCACTCTATATATGCGAAAAGCCGAAAACAGCCATGTGTTCTGCTCTTTGTTCCTTTTTGTTTAAGTTTTGTTGCTGGGATAACACTTTGTAGCCTGCCTCTCATGAATCATGATGGAAATGGAAGGGGTCTCCCTCTTCTGGCTATAATACATTTGCTTCTCAAATATTACAGTACATTTCTAAAGGAAAGAAAAAAAAAGATATGGTAAATTGAAACTTCCATGCCTTTTTCCATATCTATTTATAGGTTTTGCACGTGTTGTCCAAATGTGATCCTTTATAGAGGTCACACCTTTATCCAGGTTTCTTATCCGAGCTAATCGAAATCCAAGAACAAAAATACTACTGTGGCAAAAAAGAATAAGGAAGAACATAAGGAACTCCCACATGTCCAAAAATGGAAGCAATTAGTTTGGTTTCAATACAGGCCACAAAAGAAATGGTCAGCTCAACTCCTACGGTTGAGGCTCACACCTCATTCACCCTGTCCTGAGCAATCCTTTTTAGGCTCCTTCCTGCAAGGCTGCAACTATATAGGCCGATGAGGACAGAAGGGGGAAAAAACACAGGCGCATTCTACCGAGAGGCACAGGGGTTGCAAGAAGTCGCCTAATTCTCCTATTGAATTAGGCACATCTTCGCCCCCACATTGCCTCTCATTGTAAAATAGTATCAACTGATAATCCACAGGAACTAAACAACAATTAAATCCAATTATGGACGGATTGGTAGGCCTCTTGAAAATACGGGTGGTGCGTGGGATTAACCTTGCCTACCGCGACACAAGAGGCAGTGATCCATATGTCGTCCTTCGCCTCGGCAAGCAAAAAGTGAAGACTAGTGTAAAGAAGAAATCTGTGAATCCTATTTGGCATGAAGAGCTAACTTTGTCGATCATGAACCCTATTGCACCGATTAAGCTTGGGGTGTTTGACAAAGACACTTTCAGTAGAGACGACCCAATGGGAGATGCAGAAATAGACCTGGAGCCCTTCATGGAAGTTCTGAACATGGACCCGGAGAACATTCGGAATGGTTCCATCATAAAAACAATTCGACCATCCAACCAGAACTGCCTTGCTGATGAGAGTCACCTATTCTGGAGGAATGGTAAATTTGTCCAGGACATTATTCTCCGACTTAGAAACGTCGAGAGTGGTGAGCTGCAAGTGCAACTGCAATGGGTGAAAATTCCTGGCAGGCACTAAGTGTCTCATGGCCATTGGGAGATCTTGGCTACTGAGATATCATTGACA-TTTCCGAATGCCAAAACATATATTGTGCGAAATGGATCATGTCAACCATTGGGGCTGTAAATACTGTGCAAAAAATGAATCATGTCAAGCACGTTTTGATGTGGAGGTTGTGACCAGC-AAAGGGTTCATCAGGTTAGTCAATGTCTGTAGGAAAGGAAAATGATGTTAAAATGTTGTTG-CCGAAATGTATTGGGAGCATGATCAGTAAAGCTTGGGATGACATAATCAAATAGTACAAACGATAGGACCATGTTTGCCTGTGCTTTTGCAACAAATCAATCACAAAT]

[+] EMBL AK059356             [TGCTTTAATTTATTTACCTTACATTTTGCTACTCACATAAACTTTGTTCCAGAAACATTGTTTGAAAATATGGTGATTTTTTTAACTATTGTTGATAAAAACTTGGTGCTGTTATGGACCTGGCCTGATCTGTGGTGGCGAATGAGTGAGGGGATGGCATCACTCTATATATGCGAAAAGCCGAAAACAGCCATGTGTTCTGCTCTTTGTTCCTTTTTGTTTAAGTTTTGTTGCTGGGATAACACTTTGTAGCCTGCCTCTCATGAATCATGATGGAAATGGAAGGGGTCTCCCTCTTCTGGCTATAATACATTTGCTTCTCAAATATTACAGTACATTTCTAAAGGAAAGAAAAAAAAAGATATGGTAAATTGAAACTTCCATGCCTTTTTCCATATCTATTTATAGGTTTTGCACGTGTTGTCCAAATGTGATCCTTTATAGAGGTCACACCTTTATCCAGGTTTCTTATCCGAGCTAATCGAAATCCAAGAACAAAAATACTACTGTGGCAAAAAAGAATAAGGAAGAACATAAGGAACTCCCACATGTCCAAAAATGGAAGCAATTAGTTTGGTTTCAATACAGGCCACAAAAGAAATGGTCAGCTCAACTCCTACGGTTGAGGCTCACACCTCATTCACCCTGTCCTGAGCAATCCTTTTTAGGCTCCTTCCTGCAAGGCTGCAACTATATAGGCCGATGAGGACAGAAGGGGGAAAAAACACAGGCGCATTCTACCGAGAGGCACAGGGGTTGCAAGAAGTCGCCTAATTCTCCTATTGAATTAGGCACATCTTCGCCCCCACATTGCCTCTCATTGTAAAATAGTATCAACTGATAATCCACAGGAACTAAACAACAATTAAATCCAATTATGGACGGATTGGTAGGCCTCTTGAAAATACGGGTGGTGCGTGGGATTAACCTTGCCTACCGCGACACAAGAGGCAGTGATCCATATGTCGTCCTTCGCCTCGGCGAGCAAAAAGTGAAGACTAGTGTAAAGAAGAAATCTGTGAATCCTATTTGGCATGAAGAGCTAACTTTGTCGATCATGAACCCTATTGCACCGATTAAGCTTGGGGTGTTTGACAAAGACACTTTCAGTAGAGACGACCCAATGGGAGATGCAGAAATAGACCTGGAGCCCTTCATGGAAGTTCTGAACATGGACCCGGAGAACATTCGGAATGGTTCCATCATAAAAACAATTCGACCATCCAACCAGAACTGCCTTGCTGATGAGAGTCACCTATTCTGGAGGAATGGTAAATTTGTCCAGGACATTATTCTCCGACTTAGAAACGTCGAGAGTGGTGAGCTGCAAGTGCAACTGCAATGGGTGAAAATTCCTGGCAGGCACTAAGTGTCTCATGGCCATTGGGAGATCTTGGCTACTGAGATATCATTGACA TTTCCGAATGCCAAAACATATATTGTGCGAAATGGATCATGTCAACCATTGGGGCTGTAAATACTGTGCAAAAAATGAATCATGTCAAGCACGTTTTGATGTGGAGGTTGTGACCAGC AAAGGGTTCATCAGGTTAGTCAATGTCTGTAGGAAAGGAAAATGATGTTAAAATGTTGTTG CCGAAATGTATTGGGAGCATGATCAGTAAAGCTTGGGATGACATAATCAAATAGTACAAA                                                ]
[+] EMBL AK099299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGATGAGGACAGAAGGGGGAAAAAACACAGGCGCATTCTACCGAGAGGCACAGGGGTTGCAAGAAGTCGCCTAATTCTCCTATTGAATTAGGCACATCTTCGCCCCCACATTGCCTCTCATTGTAAAATAGTATCAACTGATAATCCACAGGAACTAAACAACAATTAAATCCAATTATGGACGGATTGGTAGGCCTCTTGAAAATACGGGTGGTGCGTGGGATTAACCTTGCCTACCGCGACACAAGAGGCAGTGATCCATATGTCGTCCTTCGCCTCGGCAAGCAAAAAGTGAAGACTAGTGTAAAGAAGAAATCTGTGAATCCTATTTGGCATGAAGAGCTAACTTTGTCGATCATGAACCCTATTGCACCGATTAAGCTTGGGGTGTTTGACAAAGACACTTTCAGTAGAGACGACCCAATGGGAGATGCAGAAATAGACCTGGAGCCCTTCATGGAAGTTCTGAACATGGACCCGGAGAACATTCGGAATGGTTCCATCATAAAAACAATTCGACCATCCAACCAGAACTGCCTTGCTGATGAGAGTCACCTATTCTGGAGGAATGGTAAATTTGTCCAGGACATTATTCTCCGACTTAGAAACGTCGAGAGTGGTGAGCTGCAAGTGCAACTGCAATGGGTGAAAATTCCTGGCAGGCACTAAGTGTCTCATGGCCATTGGGAGATCTTGGCTACTGAGATATCATTGACA TTTCCGAATGCCAAAACATATATTGTGCGAAATGGATCATGTCAACCATTGGGGCTGTAAATACTGTGCAAAAAATGAATCATGTCAAGCACGTTTTGATGTGGAGGTTGTGACCAGC AAAGGGTTCATCAGGTTAGTCAATGTCTGTAGGAAAGGAAAATGATGTTAAAATGTTGTTG CCGAAATGTATTGGGAGCATGATCAGTAAAGCTTGGGATGACATAATCAAATAGTACAAACGATAGGACCATGTTTGCCTGTGCTTTTGCAACAAATCAATCACAAAT]
[+] EMBL CA766887             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 acGAGACAAGGGGG  AAAACACAGGCGCATTCTACCGAGAGGCACAGGGGTTGCAAGAAGTCGCCTAATTCTCCTATTGAATTAGGCACATCTTCGCCCCCACATTGCCTCTCATTGTAAAATAGTATCAACTGATAATCCACAGGAACTAAACAACAATTAAATCCAATTATGGACGGATTGGTAGGCCTCTTGAAAATACGGGTGGTGCGTGGGATTAACCTTGCCTACCGCGACACAAGAGGCAGTGATCCATATGTCGTCCTTCGCCTCGGCAAGCAAAAAGTGAAGACTAGTGTAAAGAAGAAATCTGTGAATCCTATTTGGCATGAAGAGCTAACTTTGTCGATCATGAACCCTATTGCACCGATTAAGCTTGGGGTGTTTGACAAAGACACTTTCAGTAGAGACGACCCAATGGGAGATGCAGAAATAGACCTGGAGCCCTTCATGGAAGTTCTGAACATGGACCCGGAGAACATTCGGAATGGTTCCATCATAAAAACAATTCGACCATCCAACCAGAACTGCCTTGCTGATGAGAGTCACCTATTCTGGAGGAATGGTAAATTTGTCCAGGACATTATTCTCCGACTTAGAAACGTCGAGAGTGGTGAGCTGCAAGTGCAACTGCAATGGGTGAAAATTCCTGGCAGGCACTAAGTGTCTCATGGCCATTGGGAGATCTTGGCTACTGAGATATCATTGACATTTTCCGAATGCCAAAACATATATTGNGCGAAATGGATCATGTCAACCATTGGGGCCGTAAATACTGNGC AAAAATGAATCATGTCAAGCACGTTTTGATGGGGAGGNTGNGACCAGCAAAAGGGTT ATCAGGTTAGTCAATGTCTGTAGGAAAGGAAAA GGTGGTTAAATGTTGTTGNCCG                                                                                                         ]
[+] EMBL CB097081             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAATAGACCTGGAGCCCTTCATGGAAGTTCTGAACATGGACCCGGAGAACATTCGGAATGGTTCCATCATAAAAACAATTCGACCATCCAACCAGAACTGCCTTGCTGATGAGAGTCACCTATTCTGGAGGAATGGTAAATTTGTCCAGGACATTATTCTCCGACTTAGAAACGTCGAGAGTGGTGAGCTGCAAGTGCAACTGCAATGGGTGAAAATTCCTGGCAGGCACTAAGTGTCTCATGGCCATTGGGAGATCTTGGCTACTGAGATATCATTGACA TTTCCGAATGCCAAAACATATATTGTGCGAAATGGATCATGTCAACCATTGGGGCTGTAAATACTGTGCAAAAAATGAATCATGTCAAGCACGTTTTGATGTGGAGGTTGTGACCAGC AAAGGGTTCATCAGGTTAGTCAATGTCTGTAGGAAAGGAAAATGATGTTAAAATGTTGTTG CCGAAATGTATTGGGGGCATGATCAGTAAAGCTTGGGATGACATAATCAA                                                          ]




>consensus_6486#0
TGCTTTAATTTATTTACCTTACATTTTGCTACTCACATAAACTTTGTTCCAGAAACATTG
TTTGAAAATATGGTGATTTTTTTAACTATTGTTGATAAAAACTTGGTGCTGTTATGGACC
TGGCCTGATCTGTGGTGGCGAATGAGTGAGGGGATGGCATCACTCTATATATGCGAAAAG
CCGAAAACAGCCATGTGTTCTGCTCTTTGTTCCTTTTTGTTTAAGTTTTGTTGCTGGGAT
AACACTTTGTAGCCTGCCTCTCATGAATCATGATGGAAATGGAAGGGGTCTCCCTCTTCT
GGCTATAATACATTTGCTTCTCAAATATTACAGTACATTTCTAAAGGAAAGAAAAAAAAA
GATATGGTAAATTGAAACTTCCATGCCTTTTTCCATATCTATTTATAGGTTTTGCACGTG
TTGTCCAAATGTGATCCTTTATAGAGGTCACACCTTTATCCAGGTTTCTTATCCGAGCTA
ATCGAAATCCAAGAACAAAAATACTACTGTGGCAAAAAAGAATAAGGAAGAACATAAGGA
ACTCCCACATGTCCAAAAATGGAAGCAATTAGTTTGGTTTCAATACAGGCCACAAAAGAA
ATGGTCAGCTCAACTCCTACGGTTGAGGCTCACACCTCATTCACCCTGTCCTGAGCAATC
CTTTTTAGGCTCCTTCCTGCAAGGCTGCAACTATATAGGCCGATGAGGACAGAAGGGGGA
AAAAACACAGGCGCATTCTACCGAGAGGCACAGGGGTTGCAAGAAGTCGCCTAATTCTCC
TATTGAATTAGGCACATCTTCGCCCCCACATTGCCTCTCATTGTAAAATAGTATCAACTG
ATAATCCACAGGAACTAAACAACAATTAAATCCAATTATGGACGGATTGGTAGGCCTCTT
GAAAATACGGGTGGTGCGTGGGATTAACCTTGCCTACCGCGACACAAGAGGCAGTGATCC
ATATGTCGTCCTTCGCCTCGGCAAGCAAAAAGTGAAGACTAGTGTAAAGAAGAAATCTGT
GAATCCTATTTGGCATGAAGAGCTAACTTTGTCGATCATGAACCCTATTGCACCGATTAA
GCTTGGGGTGTTTGACAAAGACACTTTCAGTAGAGACGACCCAATGGGAGATGCAGAAAT
AGACCTGGAGCCCTTCATGGAAGTTCTGAACATGGACCCGGAGAACATTCGGAATGGTTC
CATCATAAAAACAATTCGACCATCCAACCAGAACTGCCTTGCTGATGAGAGTCACCTATT
CTGGAGGAATGGTAAATTTGTCCAGGACATTATTCTCCGACTTAGAAACGTCGAGAGTGG
TGAGCTGCAAGTGCAACTGCAATGGGTGAAAATTCCTGGCAGGCACTAAGTGTCTCATGG
CCATTGGGAGATCTTGGCTACTGAGATATCATTGACATTTCCGAATGCCAAAACATATAT
TGTGCGAAATGGATCATGTCAACCATTGGGGCTGTAAATACTGTGCAAAAAATGAATCAT
GTCAAGCACGTTTTGATGTGGAGGTTGTGACCAGCAAAGGGTTCATCAGGTTAGTCAATG
TCTGTAGGAAAGGAAAATGATGTTAAAATGTTGTTGCCGAAATGTATTGGGAGCATGATC
AGTAAAGCTTGGGATGACATAATCAAATAGTACAAACGATAGGACCATGTTTGCCTGTGC
TTTTGCAACAAATCAATCACAAAT
clustalw multiple alignements is not computed in this case