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Oryza sativa
cluster # 6493 cluster # 6493       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6493#0 length = 2391 sequences # 1  
consensus_6493#1 length = 691 sequences # 2  
consensus_6493#2 length = 187 sequences # 1  

consensusID : consensus_6493#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2391
fasta sequence
                              [TCCAAAAACGCTGGCCATTCCCCATTGCTGGCCTTCCCCTTTCTCCTCTGCCGCCGCCGCCGCCGCCGCCGGGAGACACTCCGGATGGCTTCGCTGCCGCCGCCGCCGCCGCCGCCGCGGCCGCTGCTGCTCACCGTCCTCCCCCAAGAGCTGGTGGTGGAGATCCTAATCCGCCTCGACGACCTGGCCGATCTCGCCCGCGCCGCCTCCGCCTGCAGAGCCCTCCGCCGCCTCATCACCTCCCGCGCCTTCCTCCGCCGCGTCCACGCGCTCCACCCCCGCCCCCTCCTCGGCCTCCTCCACCTGGAACACCACGGCTCCCGCTGCCGCTTCCTCCCCGCCGAGCCGCCCCACCCCTCCGCCGCCACCGCCGCCGCCGTCGCGCGGGCGTTCGATTCCGACTCCGACTCCGACTCCTCCTTCTCCTTCCTCCCCGGCCGCTCCGGCGACTGGCGCCTCCGCGACGTCCGCCACGGCCTCGCTGTCCTATCAACCCGCCATGCCGTCACCGATGATGGATGCTTCTCCTTCCCCGACGTCGTCGTCTGCAACCCCTTGCGCCGCCGCTACGCCTGGATCCCCCCGATCTCCGACGACCTAGCGGCCCCCATCCGAAGCCTCGGCGTCGGCGTCGAGGATTTCGATTACCTGGTCGCTCCAGCCGGCCGTGAGGGTTTGTCATTCCGAGTGATCTGCAGACCCCAGTTGCCAATGGGCTGTGATGTCACCGTCTTCGTCTTCAGCTCCAGTGCCGTCATCTGGCGCGCTGCCACATTGCACGCCTGCCGTGCCACCGCTCAATTGGTCTCCCCGCAGTACGCGCACGGCTACGCCTACTGGCGGCTGATCCGATCCGCCACCAGATTGCTCTTGCTGGACACTCGCGACATGGACTTCTTCTTTGTCGATTTCGAGCAAAGGAGTGTGCCGTGGCAGGCCATTGGGGAGGCAGGGGAAGTAGGCAGGCTTGCCATGTTCAACATTGCTCATGCTAATCATACAGTGGAGCTCCTCTCTGGGGCGATTAGAGGCAGCGCCGATGAACATTGGCGGCATGACAAGACTATCCCATTGCTTCCTGGCTACAAATGGAGGATTCTAAAGCTAGCCGAAGGGTACTTACTCCTGCAAGGAAGAATTCTCGGTGACGGAACTTCGCAGTTTACTCCTGGTGACCAATTACAGTATTTCACGCTAGACATCAACACGTTTAAGCTTGAGAGGCTGTGTGCTTCAACACCCCAAGGCATCAGTTATCATCCTCAATTTGAATTATACAGATGCTTCCCTCCACCGTTATCGTTTTCAAGTATATGAAAATAGTAAGAACTTTCCGTGGTTTCTTCAGTCATTGGGAAGTCATGTCACTAGTTATTTCATAACGTATGAATCTTGGAATTTTTACATTGTTATCATCTGTGGCCATGTATATATGCACTAGATAGAGCCGGCAAATGAGATAGTTTCATATTTCACCCAAGTGGAGCTCAGTTGTTTATATGATCAAGTCATATTATTTATAAGTGTGCCTAGATGCATGTGTTTTAATTTTGGTCCAGTTCTTAACACAAGCTTAGTGGTGGCTTGGACATCTGTAGTGTACGCGGATGTGGCATCTGTAAAATTCCATAAAACATACTAGCTTGTTTGATTACACGTACATATTTATTTTGGAACTATTTGTCAATATGGTGTTGTCTATTGGCTCTACCTATAGTCTGTGGAGTATTAAGGAGAATTTTTTTTCTGATAAGTTTTCATGTTGTAGCAAGTGGGTTGAGTGAACAAGTAGCATAATCTATCTCTGTGCGTACATAATTTATCTCCCCAGATAGAATAAACAGTTTGCCAAAAAAGCATGACCACACTAGGACATATATATGTTTGGCATCTTGAAACACTTAATATTTCTGACATTTTGATGTCCAGATTCATTGACATTTTGGTGTCAAATCACCACCTAGGTTACCTTTTTTTGGGACGGAGAGAGTAGAATGTTAATTGATGACTCTGTTAACCTAACCTGACATTCCTGTTCTCTTGTCACATTGGTCAGGACTTAAAAAGGGGGACAGAGTAGCTTCTGTTGTGAAAATGTGTTGCAAGACCAGCTGCTAGCCTGCTACTACCGGCGTTGGCATCGATATGTATATATATCTACTGTACGAGCTTAGTTCGATCGGCTGTTCCATTTGAATTCTATAGTGTAGTGGTTTAGCTTCTGAAGTCTTGCTACTCTTCTTTTGCCCATATATATGCTGCATTCTGGAACTAATAAATAAAGTAGCTAGTCTGCAAAGGTAGGCATTCAGGCTTATACACGATGCACTTCAATGTATGCTCTTGTTGTCAAAGTATTATTGTTGTTAATCTGATGTCAATTTGAGCACG]

[+] EMBL AK099992             [TCCAAAAACGCTGGCCATTCCCCATTGCTGGCCTTCCCCTTTCTCCTCTGCCGCCGCCGCCGCCGCCGCCGGGAGACACTCCGGATGGCTTCGCTGCCGCCGCCGCCGCCGCCGCCGCGGCCGCTGCTGCTCACCGTCCTCCCCCAAGAGCTGGTGGTGGAGATCCTAATCCGCCTCGACGACCTGGCCGATCTCGCCCGCGCCGCCTCCGCCTGCAGAGCCCTCCGCCGCCTCATCACCTCCCGCGCCTTCCTCCGCCGCGTCCACGCGCTCCACCCCCGCCCCCTCCTCGGCCTCCTCCACCTGGAACACCACGGCTCCCGCTGCCGCTTCCTCCCCGCCGAGCCGCCCCACCCCTCCGCCGCCACCGCCGCCGCCGTCGCGCGGGCGTTCGATTCCGACTCCGACTCCGACTCCTCCTTCTCCTTCCTCCCCGGCCGCTCCGGCGACTGGCGCCTCCGCGACGTCCGCCACGGCCTCGCTGTCCTATCAACCCGCCATGCCGTCACCGATGATGGATGCTTCTCCTTCCCCGACGTCGTCGTCTGCAACCCCTTGCGCCGCCGCTACGCCTGGATCCCCCCGATCTCCGACGACCTAGCGGCCCCCATCCGAAGCCTCGGCGTCGGCGTCGAGGATTTCGATTACCTGGTCGCTCCAGCCGGCCGTGAGGGTTTGTCATTCCGAGTGATCTGCAGACCCCAGTTGCCAATGGGCTGTGATGTCACCGTCTTCGTCTTCAGCTCCAGTGCCGTCATCTGGCGCGCTGCCACATTGCACGCCTGCCGTGCCACCGCTCAATTGGTCTCCCCGCAGTACGCGCACGGCTACGCCTACTGGCGGCTGATCCGATCCGCCACCAGATTGCTCTTGCTGGACACTCGCGACATGGACTTCTTCTTTGTCGATTTCGAGCAAAGGAGTGTGCCGTGGCAGGCCATTGGGGAGGCAGGGGAAGTAGGCAGGCTTGCCATGTTCAACATTGCTCATGCTAATCATACAGTGGAGCTCCTCTCTGGGGCGATTAGAGGCAGCGCCGATGAACATTGGCGGCATGACAAGACTATCCCATTGCTTCCTGGCTACAAATGGAGGATTCTAAAGCTAGCCGAAGGGTACTTACTCCTGCAAGGAAGAATTCTCGGTGACGGAACTTCGCAGTTTACTCCTGGTGACCAATTACAGTATTTCACGCTAGACATCAACACGTTTAAGCTTGAGAGGCTGTGTGCTTCAACACCCCAAGGCATCAGTTATCATCCTCAATTTGAATTATACAGATGCTTCCCTCCACCGTTATCGTTTTCAAGTATATGAAAATAGTAAGAACTTTCCGTGGTTTCTTCAGTCATTGGGAAGTCATGTCACTAGTTATTTCATAACGTATGAATCTTGGAATTTTTACATTGTTATCATCTGTGGCCATGTATATATGCACTAGATAGAGCCGGCAAATGAGATAGTTTCATATTTCACCCAAGTGGAGCTCAGTTGTTTATATGATCAAGTCATATTATTTATAAGTGTGCCTAGATGCATGTGTTTTAATTTTGGTCCAGTTCTTAACACAAGCTTAGTGGTGGCTTGGACATCTGTAGTGTACGCGGATGTGGCATCTGTAAAATTCCATAAAACATACTAGCTTGTTTGATTACACGTACATATTTATTTTGGAACTATTTGTCAATATGGTGTTGTCTATTGGCTCTACCTATAGTCTGTGGAGTATTAAGGAGAATTTTTTTTCTGATAAGTTTTCATGTTGTAGCAAGTGGGTTGAGTGAACAAGTAGCATAATCTATCTCTGTGCGTACATAATTTATCTCCCCAGATAGAATAAACAGTTTGCCAAAAAAGCATGACCACACTAGGACATATATATGTTTGGCATCTTGAAACACTTAATATTTCTGACATTTTGATGTCCAGATTCATTGACATTTTGGTGTCAAATCACCACCTAGGTTACCTTTTTTTGGGACGGAGAGAGTAGAATGTTAATTGATGACTCTGTTAACCTAACCTGACATTCCTGTTCTCTTGTCACATTGGTCAGGACTTAAAAAGGGGGACAGAGTAGCTTCTGTTGTGAAAATGTGTTGCAAGACCAGCTGCTAGCCTGCTACTACCGGCGTTGGCATCGATATGTATATATATCTACTGTACGAGCTTAGTTCGATCGGCTGTTCCATTTGAATTCTATAGTGTAGTGGTTTAGCTTCTGAAGTCTTGCTACTCTTCTTTTGCCCATATATATGCTGCATTCTGGAACTAATAAATAAAGTAGCTAGTCTGCAAAGGTAGGCATTCAGGCTTATACACGATGCACTTCAATGTATGCTCTTGTTGTCAAAGTATTATTGTTGTTAATCTGATGTCAATTTGAGCACG]


>consensus_6493#0 TCCAAAAACGCTGGCCATTCCCCATTGCTGGCCTTCCCCTTTCTCCTCTGCCGCCGCCGC CGCCGCCGCCGGGAGACACTCCGGATGGCTTCGCTGCCGCCGCCGCCGCCGCCGCCGCGG CCGCTGCTGCTCACCGTCCTCCCCCAAGAGCTGGTGGTGGAGATCCTAATCCGCCTCGAC GACCTGGCCGATCTCGCCCGCGCCGCCTCCGCCTGCAGAGCCCTCCGCCGCCTCATCACC TCCCGCGCCTTCCTCCGCCGCGTCCACGCGCTCCACCCCCGCCCCCTCCTCGGCCTCCTC CACCTGGAACACCACGGCTCCCGCTGCCGCTTCCTCCCCGCCGAGCCGCCCCACCCCTCC GCCGCCACCGCCGCCGCCGTCGCGCGGGCGTTCGATTCCGACTCCGACTCCGACTCCTCC TTCTCCTTCCTCCCCGGCCGCTCCGGCGACTGGCGCCTCCGCGACGTCCGCCACGGCCTC GCTGTCCTATCAACCCGCCATGCCGTCACCGATGATGGATGCTTCTCCTTCCCCGACGTC GTCGTCTGCAACCCCTTGCGCCGCCGCTACGCCTGGATCCCCCCGATCTCCGACGACCTA GCGGCCCCCATCCGAAGCCTCGGCGTCGGCGTCGAGGATTTCGATTACCTGGTCGCTCCA GCCGGCCGTGAGGGTTTGTCATTCCGAGTGATCTGCAGACCCCAGTTGCCAATGGGCTGT GATGTCACCGTCTTCGTCTTCAGCTCCAGTGCCGTCATCTGGCGCGCTGCCACATTGCAC GCCTGCCGTGCCACCGCTCAATTGGTCTCCCCGCAGTACGCGCACGGCTACGCCTACTGG CGGCTGATCCGATCCGCCACCAGATTGCTCTTGCTGGACACTCGCGACATGGACTTCTTC TTTGTCGATTTCGAGCAAAGGAGTGTGCCGTGGCAGGCCATTGGGGAGGCAGGGGAAGTA GGCAGGCTTGCCATGTTCAACATTGCTCATGCTAATCATACAGTGGAGCTCCTCTCTGGG GCGATTAGAGGCAGCGCCGATGAACATTGGCGGCATGACAAGACTATCCCATTGCTTCCT GGCTACAAATGGAGGATTCTAAAGCTAGCCGAAGGGTACTTACTCCTGCAAGGAAGAATT CTCGGTGACGGAACTTCGCAGTTTACTCCTGGTGACCAATTACAGTATTTCACGCTAGAC ATCAACACGTTTAAGCTTGAGAGGCTGTGTGCTTCAACACCCCAAGGCATCAGTTATCAT CCTCAATTTGAATTATACAGATGCTTCCCTCCACCGTTATCGTTTTCAAGTATATGAAAA TAGTAAGAACTTTCCGTGGTTTCTTCAGTCATTGGGAAGTCATGTCACTAGTTATTTCAT AACGTATGAATCTTGGAATTTTTACATTGTTATCATCTGTGGCCATGTATATATGCACTA GATAGAGCCGGCAAATGAGATAGTTTCATATTTCACCCAAGTGGAGCTCAGTTGTTTATA TGATCAAGTCATATTATTTATAAGTGTGCCTAGATGCATGTGTTTTAATTTTGGTCCAGT TCTTAACACAAGCTTAGTGGTGGCTTGGACATCTGTAGTGTACGCGGATGTGGCATCTGT AAAATTCCATAAAACATACTAGCTTGTTTGATTACACGTACATATTTATTTTGGAACTAT TTGTCAATATGGTGTTGTCTATTGGCTCTACCTATAGTCTGTGGAGTATTAAGGAGAATT TTTTTTCTGATAAGTTTTCATGTTGTAGCAAGTGGGTTGAGTGAACAAGTAGCATAATCT ATCTCTGTGCGTACATAATTTATCTCCCCAGATAGAATAAACAGTTTGCCAAAAAAGCAT GACCACACTAGGACATATATATGTTTGGCATCTTGAAACACTTAATATTTCTGACATTTT GATGTCCAGATTCATTGACATTTTGGTGTCAAATCACCACCTAGGTTACCTTTTTTTGGG ACGGAGAGAGTAGAATGTTAATTGATGACTCTGTTAACCTAACCTGACATTCCTGTTCTC TTGTCACATTGGTCAGGACTTAAAAAGGGGGACAGAGTAGCTTCTGTTGTGAAAATGTGT TGCAAGACCAGCTGCTAGCCTGCTACTACCGGCGTTGGCATCGATATGTATATATATCTA CTGTACGAGCTTAGTTCGATCGGCTGTTCCATTTGAATTCTATAGTGTAGTGGTTTAGCT TCTGAAGTCTTGCTACTCTTCTTTTGCCCATATATATGCTGCATTCTGGAACTAATAAAT AAAGTAGCTAGTCTGCAAAGGTAGGCATTCAGGCTTATACACGATGCACTTCAATGTATG CTCTTGTTGTCAAAGTATTATTGTTGTTAATCTGATGTCAATTTGAGCACG



consensusID : consensus_6493#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 691
fasta sequence
                              [AGGCAGGGGAAGTAGGCAGGCTTGCCATGTTCAACATTGCTCATGCTAATCATACAGTGGAGCTCCTCTCTGGGGCGATTAGAGGCAGCGCCGATGAACATTGGCGGCATGACAAGACTATCCCATTGCTTCCTGGCTACAAATGGAGGATTCTAAAGCTAGCCGAAGGGTACTTACTCCTGCAAGGAAGAATTCTCGGTGACGGAACTTCGCAGTTTACTCCTGGTGACCAATTACAGTATTTCACGCTAGACATCAACACGTTTAAGCTTGAGAGGCTGTGTGCTTCAACACCCCAAGGCATCAGTTATCATCCTCAATTTGAATTATACAGATGCTTCCCTCCACCGTTATCGTTTTCAAGTATATGAAAATAGACTTAAAAAGGGGGACAGAGTAGCTTCTGTTCTGAAAATGTGTTGCAAGACCAGCTGCTAGCCTGCTACTACCGGCGTTGGCATCGATATGTATATATATCTACTGTACGAGCCGAGTTCGATCGGCTGTTCCATTTGAATTCTATAGTGTAGTGGTTTAGCTTCTGAAGTCTTGCTACTCTTCTTTTGCCCATATATATGCTGCATTCTGGAACTAATAAATAAAGTAGCTAGTCTGCAAAGGTAGGCATTCGCGCTTATACACGATGCACTTCAATGTATGCTCTTGTTGTCAAAGTATTATTGTTGTTAAT]

[+] EMBL CA999995             [AGGCAGGGGAAGTAGGCAGGCTTGCCATGTTCAACATTGCTCATGCTAATCATACAGTGGAGCTCCTCTCTGGGGCGATTAGAGGCAGCGCCGATGAACATTGGCGGCATGACAAGACTATCCCATTGCTTCCTGGCTACAAATGGAGGATTCTAAAGCTAGCCGAAGGGTACTTACTCCTGCAAGGAAGAATTCTCGGTGACGGAACTTCGCAGTTTACTCCTGGTGACCAATTACAGTATTTCACGCTAGACATCAACACGTTTAAGCTTGAGAGGCTGTGTGCTTCAACACCCCAAGGCATCAGTTATCATCCTCAATTTGAATTATACAGATGCTTCCCTCCACCGTTATCGTTTTCAAGTATATGAAAATAGACTTAAAAAGGGGGACAGAGTAGCTTCTGTTCTGAAAATGTGTTGCAAGACCAGCTGCTAGCCTGCTACTACCGGCGTTGGCATCGATATGTATATATATCTACTGTACGAGCCGAGTTCGATCGGCTGTTCCATTTGAATTCTATAGTGTAGTGGTTTAGCTTCTGAAGTCTTGCTACTCTTCTTTTGCCCATATATATGCTGCATTCTGGAACTAATAAATAAAGTAGCTAGTCTGCAAAGGTAGGCATTCGCGCTTATACACGATGCACTTCAATGTATGCTCTTGTTGTCAAAGTATTATTGTTGTTAAT]
[+] EMBL CA999299             [ GGCAGGGGAAGTAGGCAGGCTTGCCATGTTCAACATTGCTCATGCTAATCATACAGTGGAGCTCCTCTCTGGGGCGATTAGAGGCAGCGCCGATGAACATTGGCGGCATGACAAGACTATCCCATTGCTTCCTGGCTACAAATGGAGGATTCTAAAGCTAGCCGAAGGGTACTTACTCCTGCAAGGAAGAATTCTCGGTGACGGAACTTCGCAGTTTACTCCTGGTGACCAATTACAGTATTTCACGCTAGACATCAACACGTTTAAGCTTGAGAGGCTGTGTGC                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_6493#1 AGGCAGGGGAAGTAGGCAGGCTTGCCATGTTCAACATTGCTCATGCTAATCATACAGTGG AGCTCCTCTCTGGGGCGATTAGAGGCAGCGCCGATGAACATTGGCGGCATGACAAGACTA TCCCATTGCTTCCTGGCTACAAATGGAGGATTCTAAAGCTAGCCGAAGGGTACTTACTCC TGCAAGGAAGAATTCTCGGTGACGGAACTTCGCAGTTTACTCCTGGTGACCAATTACAGT ATTTCACGCTAGACATCAACACGTTTAAGCTTGAGAGGCTGTGTGCTTCAACACCCCAAG GCATCAGTTATCATCCTCAATTTGAATTATACAGATGCTTCCCTCCACCGTTATCGTTTT CAAGTATATGAAAATAGACTTAAAAAGGGGGACAGAGTAGCTTCTGTTCTGAAAATGTGT TGCAAGACCAGCTGCTAGCCTGCTACTACCGGCGTTGGCATCGATATGTATATATATCTA CTGTACGAGCCGAGTTCGATCGGCTGTTCCATTTGAATTCTATAGTGTAGTGGTTTAGCT TCTGAAGTCTTGCTACTCTTCTTTTGCCCATATATATGCTGCATTCTGGAACTAATAAAT AAAGTAGCTAGTCTGCAAAGGTAGGCATTCGCGCTTATACACGATGCACTTCAATGTATG CTCTTGTTGTCAAAGTATTATTGTTGTTAAT



consensusID : consensus_6493#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 187
fasta sequence
                              [CGTGGTTTCTTCAGTCATTGGGAAGTCATGTCACTAGTTATTTCATAACGTATGAATCTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF331225             [CGTGGTTTCTTCAGTCATTGGGAAGTCATGTCACTAGTTATTTCATAACGTATGAATCTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_6493#2 CGTGGTTTCTTCAGTCATTGGGAAGTCATGTCACTAGTTATTTCATAACGTATGAATCTT GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6493#0      TCCAAAAACGCTGGCCATTCCCCATTGCTGGCCTTCCCCTTTCTCCTCTGCCGCCGCCGC 60
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      CGCCGCCGCCGGGAGACACTCCGGATGGCTTCGCTGCCGCCGCCGCCGCCGCCGCCGCGG 120
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      CCGCTGCTGCTCACCGTCCTCCCCCAAGAGCTGGTGGTGGAGATCCTAATCCGCCTCGAC 180
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GACCTGGCCGATCTCGCCCGCGCCGCCTCCGCCTGCAGAGCCCTCCGCCGCCTCATCACC 240
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      TCCCGCGCCTTCCTCCGCCGCGTCCACGCGCTCCACCCCCGCCCCCTCCTCGGCCTCCTC 300
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      CACCTGGAACACCACGGCTCCCGCTGCCGCTTCCTCCCCGCCGAGCCGCCCCACCCCTCC 360
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GCCGCCACCGCCGCCGCCGTCGCGCGGGCGTTCGATTCCGACTCCGACTCCGACTCCTCC 420
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      TTCTCCTTCCTCCCCGGCCGCTCCGGCGACTGGCGCCTCCGCGACGTCCGCCACGGCCTC 480
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GCTGTCCTATCAACCCGCCATGCCGTCACCGATGATGGATGCTTCTCCTTCCCCGACGTC 540
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GTCGTCTGCAACCCCTTGCGCCGCCGCTACGCCTGGATCCCCCCGATCTCCGACGACCTA 600
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GCGGCCCCCATCCGAAGCCTCGGCGTCGGCGTCGAGGATTTCGATTACCTGGTCGCTCCA 660
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GCCGGCCGTGAGGGTTTGTCATTCCGAGTGATCTGCAGACCCCAGTTGCCAATGGGCTGT 720
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GATGTCACCGTCTTCGTCTTCAGCTCCAGTGCCGTCATCTGGCGCGCTGCCACATTGCAC 780
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GCCTGCCGTGCCACCGCTCAATTGGTCTCCCCGCAGTACGCGCACGGCTACGCCTACTGG 840
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      CGGCTGATCCGATCCGCCACCAGATTGCTCTTGCTGGACACTCGCGACATGGACTTCTTC 900
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      TTTGTCGATTTCGAGCAAAGGAGTGTGCCGTGGCAGGCCATTGGGGAGGCAGGGGAAGTA 960
consensus_6493#1      ----------------------------------------------AGGCAGGGGAAGTA 14
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GGCAGGCTTGCCATGTTCAACATTGCTCATGCTAATCATACAGTGGAGCTCCTCTCTGGG 1020
consensus_6493#1      GGCAGGCTTGCCATGTTCAACATTGCTCATGCTAATCATACAGTGGAGCTCCTCTCTGGG 74
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GCGATTAGAGGCAGCGCCGATGAACATTGGCGGCATGACAAGACTATCCCATTGCTTCCT 1080
consensus_6493#1      GCGATTAGAGGCAGCGCCGATGAACATTGGCGGCATGACAAGACTATCCCATTGCTTCCT 134
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GGCTACAAATGGAGGATTCTAAAGCTAGCCGAAGGGTACTTACTCCTGCAAGGAAGAATT 1140
consensus_6493#1      GGCTACAAATGGAGGATTCTAAAGCTAGCCGAAGGGTACTTACTCCTGCAAGGAAGAATT 194
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      CTCGGTGACGGAACTTCGCAGTTTACTCCTGGTGACCAATTACAGTATTTCACGCTAGAC 1200
consensus_6493#1      CTCGGTGACGGAACTTCGCAGTTTACTCCTGGTGACCAATTACAGTATTTCACGCTAGAC 254
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      ATCAACACGTTTAAGCTTGAGAGGCTGTGTGCTTCAACACCCCAAGGCATCAGTTATCAT 1260
consensus_6493#1      ATCAACACGTTTAAGCTTGAGAGGCTGTGTGCTTCAACACCCCAAGGCATCAGTTATCAT 314
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      CCTCAATTTGAATTATACAGATGCTTCCCTCCACCGTTATCGTTTTCAAGTATATGAAAA 1320
consensus_6493#1      CCTCAATTTGAATTATACAGATGCTTCCCTCCACCGTTATCGTTTTCAAGTATATGAAAA 374
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      TAGT----AAGAACTTTCCGTGGTTTCTTCAGTCATTGGGAAGTCATGTCACTAG-TTAT 1375
consensus_6493#1      TAGACTTAAAAAGGGGGACAGAGTAGCTTCTGTTCT---GAAAATGTGTTGCAAGACCAG 431
consensus_6493#2      ------------------CGTGGTTTCTTCAGTCATTGGGAAGTCATGTCACTAG-TTAT 41
                                        *   **  **** **  *   ***    ***  * **   * 

consensus_6493#0      TTCATAACGTATGAATCTTGGAATTTTTACATTGTTATCATCTGTGGCCATGTATATATG 1435
consensus_6493#1      CTGCTAGCCTGCTACTACCGG-----------CGTTGGCATCGATA--TGTATATATATC 478
consensus_6493#2      TTCATAACGTATGAATCTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 101
                       *  ** * *   * *   **                  *             * * *  

consensus_6493#0      CACTAGATAGAGCCGGCAAATGAGATAGTTTCATATTTCACCCAAGTGGAGCTCAGTTGT 1495
consensus_6493#1      TACTGTACGAGCCGAGTTCGATCGGCTGTTCCAT-TTGAATTC---TATAGTGTAGTGGT 534
consensus_6493#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 161
                       *    *                         *      *         *    *     

consensus_6493#0      TTATATGATCAAGTCATATTATTTATAAGTGTGCCTAGATGCATGTGTTTTAATTTTGGT 1555
consensus_6493#1      TTAGCTTCTGAAGTCTTGCTACTCTTCT-TTTGCCCATAT--ATATGCTGCATTCTGGAA 591
consensus_6493#2      AAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------------- 187
                        *       **        *                                       

consensus_6493#0      CCAGTTCTTAACACAAGCTTAGTGGTGGCTTGGACATCTGTAGT-GTACGCGGATGTGGC 1614
consensus_6493#1      CTAATAAATAAAGTAGCTAGTCTGCAAAGGTAGGCATTCGCGCTTATACACG-ATGCACT 650
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      ATC-TGTAAAATTCCATAA--AACATACTAGCTTGTTTGATTACACGTACATATTTATTT 1671
consensus_6493#1      TCAATGTATGCTCTTGTTGTCAAAGTATTATTGTTGTTAAT------------------- 691
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      TGGAACTATTTGTCAATATGGTGTTGTCTATTGGCTCTACCTATAGTCTGTGGAGTATTA 1731
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      AGGAGAATTTTTTTTCTGATAAGTTTTCATGTTGTAGCAAGTGGGTTGAGTGAACAAGTA 1791
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GCATAATCTATCTCTGTGCGTACATAATTTATCTCCCCAGATAGAATAAACAGTTTGCCA 1851
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      AAAAAGCATGACCACACTAGGACATATATATGTTTGGCATCTTGAAACACTTAATATTTC 1911
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      TGACATTTTGATGTCCAGATTCATTGACATTTTGGTGTCAAATCACCACCTAGGTTACCT 1971
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      TTTTTTGGGACGGAGAGAGTAGAATGTTAATTGATGACTCTGTTAACCTAACCTGACATT 2031
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      CCTGTTCTCTTGTCACATTGGTCAGGACTTAAAAAGGGGGACAGAGTAGCTTCTGTTGTG 2091
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      AAAATGTGTTGCAAGACCAGCTGCTAGCCTGCTACTACCGGCGTTGGCATCGATATGTAT 2151
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      ATATATCTACTGTACGAGCTTAGTTCGATCGGCTGTTCCATTTGAATTCTATAGTGTAGT 2211
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      GGTTTAGCTTCTGAAGTCTTGCTACTCTTCTTTTGCCCATATATATGCTGCATTCTGGAA 2271
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      CTAATAAATAAAGTAGCTAGTCTGCAAAGGTAGGCATTCAGGCTTATACACGATGCACTT 2331
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  

consensus_6493#0      CAATGTATGCTCTTGTTGTCAAAGTATTATTGTTGTTAATCTGATGTCAATTTGAGCACG 2391
consensus_6493#1      ------------------------------------------------------------
consensus_6493#2      ------------------------------------------------------------
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)