cluster # 6494

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Oryza sativa
cluster # 6494 cluster # 6494 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6494#0 length = 960 sequences # 4
consensusID : consensus_6494#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 960
fasta sequence
                              [ATTGAGGGTAATTACCAAAGGAGTATACCCGCAAGATGCCAATGGGTTAAGGAAAAGCGCAATCCTATACTTCGTTGTTAGCATTGTTGTCATGATCATCTGCATAGTGTGCTACAATGTGGCCGACAAGCTTCCAGTTGTCATTTACTACAAGAACATCAAGAAGAGGGCTCAGAAGGCAGAGGAAGATGGCGGGATGTCTGGATCAGCCTGGAGATCAACCTTGTGGAGCATTGTTGGGAGAGTGAAGTGGCATGGGATAGGGATAGCTCTCATCTACGCAATCACGCTCTCCATATTTCCAGGATACATCACAGAGGACGTGCACTCTGAGGCGCTGAAGGACTGGTACCCAATCATGCTCATCACTGCCTACAATGTGTTCGATCTTGTTGGCAAATCACTTCCTGCCTTCTACTTCCTCGAGAATGCAAATATCGCTGTCGCTGGGT-CGTTTGCACGGCT-CCTG-TTTTACCCTCTCTTCTACGGTTGCCT-CCATGGACCCAGTTTCTTCCGCACCGAGATCCCAGTGACCATCC-TGACATGTCTTCTTGGATTCACC-AATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC-CAAGGCTGTGCCAATCCAACACTCTGAGACAGCCGGGATAGTCATAGTGCTGTT-CCTTGTCGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACGCACCAAACGGCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATT-----AATGCCATCCTCTGTCCATAGTAACATTCACAGCTCAAAAAAAATTTCTTGTCGTTTTCATGAATTTTCTACAAAAAAAAAA]

[+] EMBL AK059439             [ATTGAGGGTAATTACCAAAGGAGTATACCCGCAAGATGCCAATGGGTTAAGGAAAAGCGCAATCCTATACTTCGTTGTTAGCATTGTTGTCATGATCATCTGCATAGTGTGCTACAATGTGGCCGACAAGCTTCCAGTTGTCATTTACTACAAGAACATCAAGAAGAGGGCTCAGAAGGCAGAGGAAGATGGCGGGATGTCTGGATCAGCCTGGAGATCAACCTTGTGGAGCATTGTTGGGAGAGTGAAGTGGCATGGGATAGGGATAGCTCTCATCTACGCAATCACGCTCTCCATATTTCCAGGATACATCACAGAGGACGTGCACTCTGAGGCGCTGAAGGACTGGTACCCAATCATGCTCATCACTGCCTACAATGTGTTCGATCTTGTTGGCAAATCACTTCCTGCCTTCTACTTCCTCGAGAATGCAAATATCGCTGTCGCTGGGT CGTTTGCACGGCT CCTG TTTTACCCTCTCTTCTACGGTTGCCT CCATGGACCCAGTTTCTTCCGCACCGAGATCCCAGTGACCATCC TGACATGTCTTCTTGGATTCACC AATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC CAAGGCTGTGCCAATCCAACACTCTGAGACAGCCGGGATAGTCATAGTGCTGTT CCTTGTCGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACGCACCAAACAGCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATT     AATGCCATCCTCTGTCCATAGTAACA                                                        ]
[+] EMBL BI809545             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 AATATC CTGTCGCTGGTTCCTTTTGCGAGGCTCCCTGTTTTTACCCTCTCTTCTACGGTTGCCTCCCATGGACCCAGCTTCTTCCGCACCGAGATCCCAGTGACCATCCGTGACATGTCTTCTTGGACTCACCAAATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC CAAGGCTGTGCCAATCCAACACTCCGAGACAGCCGGGATAGTCATAGTGCTGTT CCTTGTGGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACACACC AACGGCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATTCATGGAATGCCATCCTCTGTCCATAGTAACATTCACAGCTCAAAAAA                                        ]
[+] EMBL AU172850             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CC TGACATGTCTTCTTGGATTCACC AATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC CAAGGCTGTGCCAATCCAACACTCTGAGACAGCCGGGATAGTCATAGTGCTGTT CCTTGTCGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACGCACCAAACGGCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATT     AATGCCATCCTCTGTCCATAGTAACATTCACAGCTCATATGAAATTTCTTGTCGTTTTCATGAATTTTCTACAAAAAAAAAA]
[+] EMBL BI809224             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTGCATCCTCATGACCCTCGCGCCACAA GCTGTGCCAATCCAACACTCCGAGACACCCGGGATAGTCATAGT CTGTTCCCTTGTGCCTGGCCTGTTC TTGGTTCATTTGTTGCTT GTTTTTGGTCATTTGATAGTCCTAGTCCTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTATTTGTTATTTGCTCATTTACACACCAAACGCCCAAGGGTATGTAATTTGTTAGTGTCGCCTAGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATTCATGGAATGCCATCCTCTGTCCATAGTAACATTCACAGCTCAAAAAA                                        ]




>consensus_6494#0
ATTGAGGGTAATTACCAAAGGAGTATACCCGCAAGATGCCAATGGGTTAAGGAAAAGCGC
AATCCTATACTTCGTTGTTAGCATTGTTGTCATGATCATCTGCATAGTGTGCTACAATGT
GGCCGACAAGCTTCCAGTTGTCATTTACTACAAGAACATCAAGAAGAGGGCTCAGAAGGC
AGAGGAAGATGGCGGGATGTCTGGATCAGCCTGGAGATCAACCTTGTGGAGCATTGTTGG
GAGAGTGAAGTGGCATGGGATAGGGATAGCTCTCATCTACGCAATCACGCTCTCCATATT
TCCAGGATACATCACAGAGGACGTGCACTCTGAGGCGCTGAAGGACTGGTACCCAATCAT
GCTCATCACTGCCTACAATGTGTTCGATCTTGTTGGCAAATCACTTCCTGCCTTCTACTT
CCTCGAGAATGCAAATATCGCTGTCGCTGGGTCGTTTGCACGGCTCCTGTTTTACCCTCT
CTTCTACGGTTGCCTCCATGGACCCAGTTTCTTCCGCACCGAGATCCCAGTGACCATCCT
GACATGTCTTCTTGGATTCACCAATGGATACCTGACCTGCATCCTCATGACCCTCGCGCC
CAAGGCTGTGCCAATCCAACACTCTGAGACAGCCGGGATAGTCATAGTGCTGTTCCTTGT
CGCTGGCCTGGTCGTTGGTTCATTTGTTGCTTGGTTTTGGGTCATTTGATAGTCCTAGTC
CTGCCATCCTGTGTATCCATGTCAGTGTATCATAGTGCCATGCTCAAGCTCACTCTTTAT
TTGTTATTTGCTCATTTACGCACCAAACGGCCAAGGGTATGTAATTTGTTAGTGTCGCCT
AGACAAAATACTGGTGCTAATGTCTGTAATTTGCTATTAATGCCATCCTCTGTCCATAGT
AACATTCACAGCTCAAAAAAAATTTCTTGTCGTTTTCATGAATTTTCTACAAAAAAAAAA
clustalw multiple alignements is not computed in this case