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Oryza sativa
cluster # 6510 cluster # 6510       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6510#0 length = 1172 sequences # 4  
consensusID : consensus_6510#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1172
fasta sequence 
                              [GCGGGACGCCGGCCGGAGCACGCAAAAATCTCGCTCACCTCGTGAAGAGCTGAGATCAAGGGGGGAGAGATCGGAGGCGGCCGTAGCGTGGCGGAGATGGACCCTGCTAGCGTCAGCGCCAGCGCCAGCGGCGA-CCCGATGGCGGAGTGCCCTCCGGCGGCGGCTGCCGCTG-AGGGCAGCGACGCCATGGACTGCGGCGGCGGCGGGCGGAGCAACGCGAGGGTGGCCGGAGTGCTCCGCGGGTTCCTCGCCGTGCAGCAGCGCCGCGCCGAGGCGTACTCCACGCTCCGAAGGGGTTTTTCTGAATACATGGCTAA-TGGAGGTGAATTAGCTTTTCAACAACTATGCGCGAGTGTTACGGCGGAGTTCAATGATTGCTCGAAACAAGTTCTCGAAATGGTAGCCCTCCTATCAACGCCAGAAATTTGTCGTGGCGATCTTGCCAACTTACTGAAGGATGTGCAGGCACACGAGAAAGAGAAGTTGCATCTGACGGCAAGAATTCAGGTGTTGAAGAAAGCTGGTCGTCCTTCGGAACGCCTGGTGAACCATGCAGATTGCAGGTCAAGCAATATGGCTCAACATGTCTGTGTGCATGTCAAAGAGATAACCGAGGCTGCTGGCACGGAGGATGCAGAGGCAGATGCTGAGTATGATGGTGC-TCTTAAAGAGGCCATACAAGGTGTTCAAGAGGCAGTGACCAGCATAAACGAGCACATGGAGGAGGTGCGCTATGAGATTGATGCCCTTGGGGCAGAAATAATTGGTAATAACTTGGCTGAAGTTGAAGAAGCTTTCCCTGATACTCTATTGATAAAATAGAAAAGTTGCCTAGGCGCTAAAAGGCAGAGTGAAAACAAACAATTGGCACAAATATTTTGGACTAACAAAC-AGCTATTCGTGTCCC-TT-GGGGATTTATTAAAAAAAAGGAGAGAGAAGAGAACCGGAAGATTTGTTTATGCCAGCATTGCTTCTTTGGTGTTCTGCTATTCACTAGAATTCAGAGGAATGTGGCATGCTTTTGGTCCCTTGTTATTCACTAGAATTCAAAGGAATGTGGGATGCAATCTTTATGGGATCGATATTCGATAGAGAATGTGATCTGAAATTGTTGTGAATATTGTTATACTAATTTGGTATACTCATGCCAATAAGATTTTCTAAAAAAAAAA]

[+] EMBL AK111252             [GCGGGACGCCGGCCGGAGCACGCAAAAATCTCGCTCACCTCGTGAAGAGCTGAGATCAAGGGGGGAGAGATCGGAGGCGGCCGTAGCGTGGCGGAGATGGACCCTGCTAGCGTCAGCGCCAGCGCCAGCGGCGA CCCGATGGCGGAGTGCCCTCCGGCGGCGGCTGCCGCTG AGGGCAGCGACGCCATGGACTGCGGCGGCGGCGGGCGGAGCAACGCGAGGGTGGCCGGAGTGCTCCGCGGGTTCCTCGCCGTGCAGCAGCGCCGCGCCGAGGCGTACTCCACGCTCCGAAGGGGTTTTTCTGAATACATGGCTAA TGGAGGTGAATTAGCTTTTCAACAACTATGCGCGAGTGTTACGGCGGAGTTCAATGATTGCTCGAAACAAGTTCTCGAAATGGTAGCCCTCCTATCAACGCCAGAAATTTGTCGTGGCGATCTTGCCAACTTACTGAAGGATGTGCAGGCACACGAGAAAGAGAAGTTGCATCTGACGGCAAGAATTCAGGTGTTGAAGAAAGCTGGTCGTCCTTCGGAACGCCTGGTGAACCATGCAGATTGCAGGTCAAGCAATATGGCTCAACATGTCTGTGTGCATGTCAAAGAGATAACCGAGGCTGCTGGCACGGAGGATGCAGAGGCAGATGCTGAGTATGATGGTGC TCTTAAAGAGGCCATACAAGGTGTTCAAGAGGCAGTGACCAGCATAAACGAGCACATGGAGGAGGTGCGCTATGAGATTGATGCCCTTGGGGCAGAAATAATTGGTAATAACTTGGCTGAAGTTGAAGAAGCTTTCCCTGATACTCTATTGATAAAATAGAAAAGTTGCCTAGGCGCTAAAAGGCAGAGTGAAAACAAACAATTGGCACAAATATTTTGGACTAACAAACAAGCTATTCGTGTCCCTTT GGGGATTTATTAAAAAAAAGGAGAGAGAAGAGAACCGGAAGATTTGTTTATGCCAGCATTGCTTCTTTGGTGTTCTGCTATTCACTAGAATTCAGAGGAATGTGGCATGCTTTTGGTCCCTTGTTATTCACTAGAATTCAAAGGAATGTGGGATGCAATCTTTATGGGATCGATATTCGATAGAGAATGTGATCTGAAATTGTTGTGAATATTGTTATACTAATTTGGTATACTCATGCCAATAAGATTTTCTAA        ]
[+] EMBL C26866               [                                  TCACCTCGTGAAGAGCTGAGATCAAGGGGGGAGAGATCGGAGGCGGCCGTAGCGTGGCGGAGATGGATCCTGCTAGCGTCA CCNCAGNCNCAAC GNGANCCCGATGGCGGAGTGCCCTCCGGCGGCGGCTGCC CTGAAGGGCAGCNACGCCATGGACTGCGGCGGCGGCGGGCGGA NAACGCAAGGNTGGCCGGAGTGCTCCGCGGGTTCCTCGCCGTGCAGCAGCGCCGCGCCGAGGCGTACTCCACGNTCCGAAGGGGTTTTTCTGAATACATGGCTAATTGGAGGTGAATTAGCTTTTCAACAACTATGCGCGAGTTTTACGGCGGAGTTCAATGATTNCTCGAAAAAAGTT TNGAAATGGTAGCCCTCCTATCAACGCCAGAAATTTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA753100             [                                                                                                                                                                                                                                                                                                                                                                         ttccatatTTC AT ATTATTCCCTATAGGTTCTCGAAATGGTAGCCCTCCTATCAACGCCAGAAATTTGTCGTGGCGATCTTGCCAACTTACTGAAGAATGTGCAGGCACACGAGAAAGAGAAGTTGCATCTGACGGCAAGAATTCAGGTGTTGAAGAAAGCTGGTCGTCCTTCGGAACGCCTGGTGAACCATGCAGATTGCAGGTCAAGCAATATGGCTCAACATGTCTGTGTGCATGTCAAAGAGATAACCGAGGCTGCTGGCACGGAGGATGCAGAGGCAGATGCTGAGTATGATGGTGC TCTTAAAGAGGCCATACAAGGTGTNCAAGAGGCAGTGACCAGCATAAACGAGCACATGGAGGAGGTGCGCTATGAGATTGATGCCCTTGGGGCAGAAATAATNGGTAATAACTTGGCTGAAGTNGAAGAAGC TTCCCTGATACTCTATNGATAAAATAGAANAGTNGCCTAGGCGCT AAAGGCA AGTGANCACAACCA  TGGCAC AATATNNTGGACT ACCAAC AGCCA TCGTGTCCC TT  GGGATNNATAAAAAcgaa                                                                                                                                                                                                                                                    ]
[+] EMBL BI804061             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGCCAGAT CTGAGTATGATGGTGCTTCTTAAAGAGCCCATACAAGTTGTTCAAGAGCCAGTGACCAGCATAAACGAGCACATGGAGGAGGTGCGCTATGAGATTGATGCCCTTGGGCCAGAAATAATTGGTAATAACTTGGCTGAAGTTGAAGAAGCTTTCCCTGATACTCTATTGATAAAATAGAAAAGTTGCCTAGGCGCTAAAAGGCAGAGTGAAAACAAACAATTGGCACAAATATTTTGGACTAACAAAC AGCTATTCGTGTCCC TTCGGGGATTTATTAAAAAAAAGGAGAGAGAAGAGAACCGGAAGATTTGTTTAGGCCAGCATTGCTTCTTTGGTGTTCTGCTATTCGCTAGAATTCAGAGGAATGTGGCATGCTTTTGGTCCCTTGTTATTCACTAGAATTCAAAGGAATGTGGGATGC ATCTTTATGGGATCGATATTCGATAGAGAATGTGATCTGAAATTGTTGTGAATATTGTTATACTAATTTGGTATACTCATGCC ATAAGATTTTCTAAAAAAAAAA]




>consensus_6510#0
GCGGGACGCCGGCCGGAGCACGCAAAAATCTCGCTCACCTCGTGAAGAGCTGAGATCAAG
GGGGGAGAGATCGGAGGCGGCCGTAGCGTGGCGGAGATGGACCCTGCTAGCGTCAGCGCC
AGCGCCAGCGGCGACCCGATGGCGGAGTGCCCTCCGGCGGCGGCTGCCGCTGAGGGCAGC
GACGCCATGGACTGCGGCGGCGGCGGGCGGAGCAACGCGAGGGTGGCCGGAGTGCTCCGC
GGGTTCCTCGCCGTGCAGCAGCGCCGCGCCGAGGCGTACTCCACGCTCCGAAGGGGTTTT
TCTGAATACATGGCTAATGGAGGTGAATTAGCTTTTCAACAACTATGCGCGAGTGTTACG
GCGGAGTTCAATGATTGCTCGAAACAAGTTCTCGAAATGGTAGCCCTCCTATCAACGCCA
GAAATTTGTCGTGGCGATCTTGCCAACTTACTGAAGGATGTGCAGGCACACGAGAAAGAG
AAGTTGCATCTGACGGCAAGAATTCAGGTGTTGAAGAAAGCTGGTCGTCCTTCGGAACGC
CTGGTGAACCATGCAGATTGCAGGTCAAGCAATATGGCTCAACATGTCTGTGTGCATGTC
AAAGAGATAACCGAGGCTGCTGGCACGGAGGATGCAGAGGCAGATGCTGAGTATGATGGT
GCTCTTAAAGAGGCCATACAAGGTGTTCAAGAGGCAGTGACCAGCATAAACGAGCACATG
GAGGAGGTGCGCTATGAGATTGATGCCCTTGGGGCAGAAATAATTGGTAATAACTTGGCT
GAAGTTGAAGAAGCTTTCCCTGATACTCTATTGATAAAATAGAAAAGTTGCCTAGGCGCT
AAAAGGCAGAGTGAAAACAAACAATTGGCACAAATATTTTGGACTAACAAACAGCTATTC
GTGTCCCTTGGGGATTTATTAAAAAAAAGGAGAGAGAAGAGAACCGGAAGATTTGTTTAT
GCCAGCATTGCTTCTTTGGTGTTCTGCTATTCACTAGAATTCAGAGGAATGTGGCATGCT
TTTGGTCCCTTGTTATTCACTAGAATTCAAAGGAATGTGGGATGCAATCTTTATGGGATC
GATATTCGATAGAGAATGTGATCTGAAATTGTTGTGAATATTGTTATACTAATTTGGTAT
ACTCATGCCAATAAGATTTTCTAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)