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Oryza sativa
cluster # 6521 cluster # 6521       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6521#0 length = 1876 sequences # 2  
consensus_6521#1 length = 689 sequences # 1  
consensus_6521#2 length = 506 sequences # 1  

consensusID : consensus_6521#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1876
fasta sequence
                              [CCGCCACTAGCCCGCCAATAATAGCAGCGCGCCCAAAGGCTAAAAAAAACCCACGACGCGCTGGTCAGTAGCCACCACACAGCGGCACAGGCGCTGCGGCAGCGGCAGCTGAGCGAGTGAGCGCCGAGGCTCCCCGGCCATGTCCAAGCCCGATCGCCGCTCCGGCGCCGCCACGTCCCCGTCGCTCCGCTTCCTCGGCCTCCTCAAGCAGCCCGACGACGGCAGCGGCGACCACGAGCTGGAGCTCGACGAGCGCGACGTCGTCTGGTCGTCGTCGTCGTCGTCGAACACCTCGCCCTCCTCGTGGGCCTCCTCAACCAATTCCTCGCCGTCCCTCACCCCGTCCGCGTCCGCGGGCGTGGGCGTCCGCCGGCCGCTGTCGTCGTCCCACGCCTTCCCCGCCGCCGGCAGCGTCGGCCTGTCCGCCCTCCTCGCCGACGATCACGCCCCCACGGCGTCCATCCCGGCCAAGGCACGCCCGGAGAGGCAGCAGCCCCCGCAGCCGTACCACCAGTCGGCGCCGGTCGCCGTGCCGGCCTGGCCCAAGGCCACGGACAGCGACAGGCGTCGCCGTGGTGTGCAGCACGAGGCCCTCAACGACGAGGAGGACGATGACGACGAGCTCGTGGTGCCGCCGCACGAGATGGCCGCGCGCCGCGCCGCGGCGGCGGCGTCGGTGATGGAGGGCGCCGGGCGGACGCTGAAAGGGCGCGACCTCCGGCGCGTGCGCAACGCGGTGTGGCGCACCACCGGCTTCCTCGACCTGTGAAAAAGGATATGAACCTTTGGAGGTTTCTCTCGCTGCCGCCACACATCAGCAACCTGCTTCGTGTTGTACTGGATTACTGATGATCCGTATGAAAAAAGGTGAAGGCTTCGGTGGCAAGAAAGGGGAAAACGACGAGTCCACACGACGACCAGCCGCTCGAGTCCGCCATGGCTTCGCCTTCACCACCGCTAAGCTCCGACGACGATGCAAGGTGAGCACATCTAGCTGTCCTACTCCCAACTTAGTACCCCTCCCTAGATGCCTAACTACAGTACCATATCCCCCTCCCCCTCCACTAAATTCCTCTTCCATGGCTGCATCGTTGTCTCGTTGAGTCACTAACTCACGTTCGGCGGTCCACAATAAGGGACGCCAATGCGGTGTTGGACCAGCCATCGCATGCTAGACAGGTACCTAGAGGATGAGTTGGTTTCAATTAATACAGAAAACTTTAAGATTCTTGATCGGTGGAAAGTGGCTAGGACAAGCTTTCCTACATTGAGGAAGGTAGCACGAGATATATTTGCTATTCCTGTTAGCACTGTTGCATCTGAATATGCATTTAGCACAAGTGGAAGGGTTCTTAGTGAGCATCGTAGCCGGCTTACTCCAGAACTCTTGGAGGCCTTAATGTGCTCACAAGATTGGCTGCGAAACAAGTATCGAGGTACATATGCTGTTTTATTCATACATCATGCTTAGCATAGATTTTACAATGCAATGGATGCAAAATAATTCTTATAATTGTTATCTTGTAGCTGATAATGAAGAAGCAGCAAGCTTTTGGAGTTGCCTTCAAGATATCCAAGATCAGATTGAGGGACTTGCTCTTGTTTGAAGACATGAATGTATGGACATGCACTGTTCTTGCAATGATTTTGGATGTTTGTAACCCCTGTTATGTGTCATGATAAACTTGTAAAACCATGGCAATGCTTTTGGATATTTGGCACAAAAGACCTACTCCGAACTATGGTTTTGTGTATGCCTAGGACAACATGTGTTGCTACTGCAATGTGGTGATAACTAATGAGTGATGACTGATGAATGATGAATGATCATGTATTATTGTGTTGTTGCTTAATCTGGGAATATGATGGATATTGT]

[+] EMBL AK106878             [CCGCCACTAGCCCGCCAATAATAGCAGCGCGCCCAAAGGCTAAAAAAAACCCACGACGCGCTGGTCAGTAGCCACCACACAGCGGCACAGGCGCTGCGGCAGCGGCAGCTGAGCGAGTGAGCGCCGAGGCTCCCCGGCCATGTCCAAGCCCGATCGCCGCTCCGGCGCCGCCACGTCCCCGTCGCTCCGCTTCCTCGGCCTCCTCAAGCAGCCCGACGACGGCAGCGGCGACCACGAGCTGGAGCTCGACGAGCGCGACGTCGTCTGGTCGTCGTCGTCGTCGTCGAACACCTCGCCCTCCTCGTGGGCCTCCTCAACCAATTCCTCGCCGTCCCTCACCCCGTCCGCGTCCGCGGGCGTGGGCGTCCGCCGGCCGCTGTCGTCGTCCCACGCCTTCCCCGCCGCCGGCAGCGTCGGCCTGTCCGCCCTCCTCGCCGACGATCACGCCCCCACGGCGTCCATCCCGGCCAAGGCACGCCCGGAGAGGCAGCAGCCCCCGCAGCCGTACCACCAGTCGGCGCCGGTCGCCGTGCCGGCCTGGCCCAAGGCCACGGACAGCGACAGGCGTCGCCGTGGTGTGCAGCACGAGGCCCTCAACGACGAGGAGGACGATGACGACGAGCTCGTGGTGCCGCCGCACGAGATGGCCGCGCGCCGCGCCGCGGCGGCGGCGTCGGTGATGGAGGGCGCCGGGCGGACGCTGAAAGGGCGCGACCTCCGGCGCGTGCGCAACGCGGTGTGGCGCACCACCGGCTTCCTCGACCTGTGAAAAAGGATATGAACCTTTGGAGGTTTCTCTCGCTGCCGCCACACATCAGCAACCTGCTTCGTGTTGTACTGGATTACTGATGATCCGTATGAAAAAAGGTGAAGGCTTCGGTGGCAAGAAAGGGGAAAACGACGAGTCCACACGACGACCAGCCGCTCGAGTCCGCCATGGCTTCGCCTTCACCACCGCTAAGCTCCGACGACGATGCAAGGTGAGCACATCTAGCTGTCCTACTCCCAACTTAGTACCCCTCCCTAGATGCCTAACTACAGTACCATATCCCCCTCCCCCTCCACTAAATTCCTCTTCCATGGCTGCATCGTTGTCTCGTTGAGTCACTAACTCACGTTCGGCGGTCCACAATAAGGGACGCCAATGCGGTGTTGGACCAGCCATCGCATGCTAGACAGGTACCTAGAGGATGAGTTGGTTTCAATTAATACAGAAAACTTTAAGATTCTTGATCGGTGGAAAGTGGCTAGGACAAGCTTTCCTACATTGAGGAAGGTAGCACGAGATATATTTGCTATTCCTGTTAGCACTGTTGCATCTGAATATGCATTTAGCACAAGTGGAAGGGTTCTTAGTGAGCATCGTAGCCGGCTTACTCCAGAACTCTTGGAGGCCTTAATGTGCTCACAAGATTGGCTGCGAAACAAGTATCGAGGTACATATGCTGTTTTATTCATACATCATGCTTAGCATAGATTTTACAATGCAATGGATGCAAAATAATTCTTATAATTGTTATCTTGTAGCTGATAATGAAGAAGCAGCAAGCTTTTGGAGTTGCCTTCAAGATATCCAAGATCAGATTGAGGGACTTGCTCTTGTTTGAAGACATGAATGTATGGACATGCACTGTTCTTGCAATGATTTTGGATGTTTGTAACCCCTGTTATGTGTCATGATAAACTTGTAAAACCATGGCAATGCTTTTGGATATTTGGCACAAAAGACCTACTCCGAACTATGGTTTTGTGTATGCCTAGGACAACATGTGTTGCTACTGCAATGTGGTGATAACTAATGAGTGATGACTGATGAATGATGAATGATCATGTATTATTGTGTTGTTGCTTAATCTGGGAATATGATGGATATTGT]
[+] EMBL CB679232             [                                                                                                      CGGCATTTGAGCGAGTGAGCGCCGAGGCTCCCCGGCCATGTCCAAGCCCGATCGCCGCTCCGGCGCCGCCACGTCCCCGTCGCTCCGCTTCCTCGGCCTCCTCAAGCAGCCCGACGACGGCAGCGGCGACCACGAGCTGGAGCTCGACGAGCGCGACGTCGTCTGGTCGTCGTCATCGTCGTCGAACACCTCGCCCTCCTCGTGGGCCTCCTCAACCAATTCCTCGCCGTCCCTCACCCCGTCCGCGGCCGCGGGCGTGGGCGTCCGCCGGCCGCTGTCGTCGTCCCACGCCTTCCCCGCCGCCGGCAGCGTCGGCCTGTCCGGCCTCCTCGACGACGATCACGCCCCCACGGCGTCCATCCCGGCCAAGGCACGCCCGGAGAGGCAGCAGCCCCCGCAACCGTACCACCAGTCGGCGCCGGTCGCCGTGCCGGCCTGGCCCAAGGCCACGGACAGCGACAGGCGTCGCCGTGGTGTGCAGCACGAGGCCCTCAACGACGAGGAGGACGATGACGACGAGCTCGTGGTGCCGCCGCACGATATGGCCGCGCGCCACGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_6521#0 CCGCCACTAGCCCGCCAATAATAGCAGCGCGCCCAAAGGCTAAAAAAAACCCACGACGCG CTGGTCAGTAGCCACCACACAGCGGCACAGGCGCTGCGGCAGCGGCAGCTGAGCGAGTGA GCGCCGAGGCTCCCCGGCCATGTCCAAGCCCGATCGCCGCTCCGGCGCCGCCACGTCCCC GTCGCTCCGCTTCCTCGGCCTCCTCAAGCAGCCCGACGACGGCAGCGGCGACCACGAGCT GGAGCTCGACGAGCGCGACGTCGTCTGGTCGTCGTCGTCGTCGTCGAACACCTCGCCCTC CTCGTGGGCCTCCTCAACCAATTCCTCGCCGTCCCTCACCCCGTCCGCGTCCGCGGGCGT GGGCGTCCGCCGGCCGCTGTCGTCGTCCCACGCCTTCCCCGCCGCCGGCAGCGTCGGCCT GTCCGCCCTCCTCGCCGACGATCACGCCCCCACGGCGTCCATCCCGGCCAAGGCACGCCC GGAGAGGCAGCAGCCCCCGCAGCCGTACCACCAGTCGGCGCCGGTCGCCGTGCCGGCCTG GCCCAAGGCCACGGACAGCGACAGGCGTCGCCGTGGTGTGCAGCACGAGGCCCTCAACGA CGAGGAGGACGATGACGACGAGCTCGTGGTGCCGCCGCACGAGATGGCCGCGCGCCGCGC CGCGGCGGCGGCGTCGGTGATGGAGGGCGCCGGGCGGACGCTGAAAGGGCGCGACCTCCG GCGCGTGCGCAACGCGGTGTGGCGCACCACCGGCTTCCTCGACCTGTGAAAAAGGATATG AACCTTTGGAGGTTTCTCTCGCTGCCGCCACACATCAGCAACCTGCTTCGTGTTGTACTG GATTACTGATGATCCGTATGAAAAAAGGTGAAGGCTTCGGTGGCAAGAAAGGGGAAAACG ACGAGTCCACACGACGACCAGCCGCTCGAGTCCGCCATGGCTTCGCCTTCACCACCGCTA AGCTCCGACGACGATGCAAGGTGAGCACATCTAGCTGTCCTACTCCCAACTTAGTACCCC TCCCTAGATGCCTAACTACAGTACCATATCCCCCTCCCCCTCCACTAAATTCCTCTTCCA TGGCTGCATCGTTGTCTCGTTGAGTCACTAACTCACGTTCGGCGGTCCACAATAAGGGAC GCCAATGCGGTGTTGGACCAGCCATCGCATGCTAGACAGGTACCTAGAGGATGAGTTGGT TTCAATTAATACAGAAAACTTTAAGATTCTTGATCGGTGGAAAGTGGCTAGGACAAGCTT TCCTACATTGAGGAAGGTAGCACGAGATATATTTGCTATTCCTGTTAGCACTGTTGCATC TGAATATGCATTTAGCACAAGTGGAAGGGTTCTTAGTGAGCATCGTAGCCGGCTTACTCC AGAACTCTTGGAGGCCTTAATGTGCTCACAAGATTGGCTGCGAAACAAGTATCGAGGTAC ATATGCTGTTTTATTCATACATCATGCTTAGCATAGATTTTACAATGCAATGGATGCAAA ATAATTCTTATAATTGTTATCTTGTAGCTGATAATGAAGAAGCAGCAAGCTTTTGGAGTT GCCTTCAAGATATCCAAGATCAGATTGAGGGACTTGCTCTTGTTTGAAGACATGAATGTA TGGACATGCACTGTTCTTGCAATGATTTTGGATGTTTGTAACCCCTGTTATGTGTCATGA TAAACTTGTAAAACCATGGCAATGCTTTTGGATATTTGGCACAAAAGACCTACTCCGAAC TATGGTTTTGTGTATGCCTAGGACAACATGTGTTGCTACTGCAATGTGGTGATAACTAAT GAGTGATGACTGATGAATGATGAATGATCATGTATTATTGTGTTGTTGCTTAATCTGGGA ATATGATGGATATTGT



consensusID : consensus_6521#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 689
fasta sequence
                              [CCTAGATGCCTAANTACAGTACCATATCCCCCTCCCCCTCCACTAAATTCCTCTTCCATGGCTGCATCGTTGTCTCGTTGAGTCACTAACTCACGTTCGGCGGTCCACAATAAGGGACGCCAATGCGGTGTTGGACCAGCCATCGCATGCTAGACAGGTACCTAGAGGATGAGTTGGTTTCAATTAATACAGAAAACTTTAAGATTCTTGATTGGTGGAAAGTGGCTAGGACAAGCTTTCCTACATTGAGGAAGGTAGCACGAGATATATTTGCTATTCCTGTTAGCACTGTTGCATCTGAATATGCATTTAGCACAAGTGGAAGGGTTCTTAGTGAGCATCGTAGCCGGCTTACTCCAGAACTCTTGGAGGCCTTAATGTGCTCACAAGATTGGCTGCGAAACAAGTATCGAGCTGATAATGAAGAAGCAGCAAGCTTTTGGAGTTGCCTTCAAGATATCCAAGATCAGATTGAGGGACTTGCTCTTGTTTGAAGACATGAATGTATGGACATGCACTGTTCTTGCAATGATTTTGGATGTTTGTAACCCCTGTTATGTGTCATGATAACCTTGTACAGTCCATGGCGAATGCTTTTGGATATTTGGCACAAAGAGACCTAGCTCCGAAGCTATGGTCTTGTGTATGCATAGGACAACATCTGTTGCTACTGCAATGTGGTGATTCTT]

[-] EMBL CB679233             [CCTAGATGCCTAANTACAGTACCATATCCCCCTCCCCCTCCACTAAATTCCTCTTCCATGGCTGCATCGTTGTCTCGTTGAGTCACTAACTCACGTTCGGCGGTCCACAATAAGGGACGCCAATGCGGTGTTGGACCAGCCATCGCATGCTAGACAGGTACCTAGAGGATGAGTTGGTTTCAATTAATACAGAAAACTTTAAGATTCTTGATTGGTGGAAAGTGGCTAGGACAAGCTTTCCTACATTGAGGAAGGTAGCACGAGATATATTTGCTATTCCTGTTAGCACTGTTGCATCTGAATATGCATTTAGCACAAGTGGAAGGGTTCTTAGTGAGCATCGTAGCCGGCTTACTCCAGAACTCTTGGAGGCCTTAATGTGCTCACAAGATTGGCTGCGAAACAAGTATCGAGCTGATAATGAAGAAGCAGCAAGCTTTTGGAGTTGCCTTCAAGATATCCAAGATCAGATTGAGGGACTTGCTCTTGTTTGAAGACATGAATGTATGGACATGCACTGTTCTTGCAATGATTTTGGATGTTTGTAACCCCTGTTATGTGTCATGATAACCTTGTACAGTCCATGGCGAATGCTTTTGGATATTTGGCACAAAGAGACCTAGCTCCGAAGCTATGGTCTTGTGTATGCATAGGACAACATCTGTTGCTACTGCAATGTGGTGATTCTT]


>consensus_6521#1 CCTAGATGCCTAANTACAGTACCATATCCCCCTCCCCCTCCACTAAATTCCTCTTCCATG GCTGCATCGTTGTCTCGTTGAGTCACTAACTCACGTTCGGCGGTCCACAATAAGGGACGC CAATGCGGTGTTGGACCAGCCATCGCATGCTAGACAGGTACCTAGAGGATGAGTTGGTTT CAATTAATACAGAAAACTTTAAGATTCTTGATTGGTGGAAAGTGGCTAGGACAAGCTTTC CTACATTGAGGAAGGTAGCACGAGATATATTTGCTATTCCTGTTAGCACTGTTGCATCTG AATATGCATTTAGCACAAGTGGAAGGGTTCTTAGTGAGCATCGTAGCCGGCTTACTCCAG AACTCTTGGAGGCCTTAATGTGCTCACAAGATTGGCTGCGAAACAAGTATCGAGCTGATA ATGAAGAAGCAGCAAGCTTTTGGAGTTGCCTTCAAGATATCCAAGATCAGATTGAGGGAC TTGCTCTTGTTTGAAGACATGAATGTATGGACATGCACTGTTCTTGCAATGATTTTGGAT GTTTGTAACCCCTGTTATGTGTCATGATAACCTTGTACAGTCCATGGCGAATGCTTTTGG ATATTTGGCACAAAGAGACCTAGCTCCGAAGCTATGGTCTTGTGTATGCATAGGACAACA TCTGTTGCTACTGCAATGTGGTGATTCTT



consensusID : consensus_6521#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 506
fasta sequence
                              [TTCGTCCCCATTCCCCACGCCGTCGCAGGCTCGTAGCCTAGCTAGCGGCGTGCCGGTGCCGACTCCCGATCTCAATCTCGTAGGGCCGCCGCGCGCCTGCCGCGTCAGCACCCACGCAGGGTCGCCGGCTTGTCGTGCTCGCGTCCGCGCAGGGCCGCTGCGCCTCCAGGTCTCGGCACTGCCGCACCAGGTCCCAGCGCCACAGTCGTCTCGGTCTCTCGGCAGCACTGAGGACGCCAAGGACTTGGCACCGGCCACCAGACGTGAAGGCTACGGTGGCAAGAAAGACCTACTCCGAACTATGTTTTTGTGTATGCCTGGACAACATGTGTAGCGGTGATAACTAATGAGTGATCGACTGGTGATTGATTAATGATCATGTGTTATTGTGTTGTTGCTTAATATGAGAATTTGATGGATAGTGTTGCTGAGGGGAAATTCTTGGGTACAAATTTGTTGTACTGCTTGTTGCTGCAATGCTGTTGCAACTGAATAAGTAATAAACT]

[+] EMBL AK107704             [TTCGTCCCCATTCCCCACGCCGTCGCAGGCTCGTAGCCTAGCTAGCGGCGTGCCGGTGCCGACTCCCGATCTCAATCTCGTAGGGCCGCCGCGCGCCTGCCGCGTCAGCACCCACGCAGGGTCGCCGGCTTGTCGTGCTCGCGTCCGCGCAGGGCCGCTGCGCCTCCAGGTCTCGGCACTGCCGCACCAGGTCCCAGCGCCACAGTCGTCTCGGTCTCTCGGCAGCACTGAGGACGCCAAGGACTTGGCACCGGCCACCAGACGTGAAGGCTACGGTGGCAAGAAAGACCTACTCCGAACTATGTTTTTGTGTATGCCTGGACAACATGTGTAGCGGTGATAACTAATGAGTGATCGACTGGTGATTGATTAATGATCATGTGTTATTGTGTTGTTGCTTAATATGAGAATTTGATGGATAGTGTTGCTGAGGGGAAATTCTTGGGTACAAATTTGTTGTACTGCTTGTTGCTGCAATGCTGTTGCAACTGAATAAGTAATAAACT]


>consensus_6521#2 TTCGTCCCCATTCCCCACGCCGTCGCAGGCTCGTAGCCTAGCTAGCGGCGTGCCGGTGCC GACTCCCGATCTCAATCTCGTAGGGCCGCCGCGCGCCTGCCGCGTCAGCACCCACGCAGG GTCGCCGGCTTGTCGTGCTCGCGTCCGCGCAGGGCCGCTGCGCCTCCAGGTCTCGGCACT GCCGCACCAGGTCCCAGCGCCACAGTCGTCTCGGTCTCTCGGCAGCACTGAGGACGCCAA GGACTTGGCACCGGCCACCAGACGTGAAGGCTACGGTGGCAAGAAAGACCTACTCCGAAC TATGTTTTTGTGTATGCCTGGACAACATGTGTAGCGGTGATAACTAATGAGTGATCGACT GGTGATTGATTAATGATCATGTGTTATTGTGTTGTTGCTTAATATGAGAATTTGATGGAT AGTGTTGCTGAGGGGAAATTCTTGGGTACAAATTTGTTGTACTGCTTGTTGCTGCAATGC TGTTGCAACTGAATAAGTAATAAACT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6521#0      CCGCCACTAGCCCGCCAATAATAGCAGCGCGCCCAAAGGCTAAAAAAAACCCACGACGCG 60
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      CTGGTCAGTAGCCACCACACAGCGGCACAGGCGCTGCGGCAGCGGCAGCTGAGCGAGTGA 120
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      GCGCCGAGGCTCCCCGGCCATGTCCAAGCCCGATCGCCGCTCCGGCGCCGCCACGTCCCC 180
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      GTCGCTCCGCTTCCTCGGCCTCCTCAAGCAGCCCGACGACGGCAGCGGCGACCACGAGCT 240
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      GGAGCTCGACGAGCGCGACGTCGTCTGGTCGTCGTCGTCGTCGTCGAACACCTCGCCCTC 300
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      CTCGTGGGCCTCCTCAACCAATTCCTCGCCGTCCCTCACCCCGTCCGCGTCCGCGGGCGT 360
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      GGGCGTCCGCCGGCCGCTGTCGTCGTCCCACGCCTTCCCCGCCGCCGGCAGCGTCGGCCT 420
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      GTCCGCCCTCCTCGCCGACGATCACGCCCCCACGGCGTCCATCCCGGCCAAGGCACGCCC 480
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      GGAGAGGCAGCAGCCCCCGCAGCCGTACCACCAGTCGGCGCCGGTCGCCGTGCCGGCCTG 540
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      GCCCAAGGCCACGGACAGCGACAGGCGTCGCCGTGGTGTGCAGCACGAGGCCCTCAACGA 600
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      CGAGGAGGACGATGACGACGAGCTCGTGGTGCCGCCGCACGAGATGGCCGCGCGCCGCGC 660
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      CGCGGCGGCGGCGTCGGTGATGGAGGGCGCCGGGCGGACGCTGAAAGGGCGCGACCTCCG 720
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      GCGCGTGCGCAACGCGGTGTGGCGCACCACCGGCTTCCTCGACCTGTGAAAAAGGATATG 780
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      AACCTTTGGAGGTTTCTCTCGCTGCCGCCACACATCAGCAACCTGCTTCGTGTTGTACTG 840
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      GATTACTGATGATCCGTATGAAAAAAGGTGAAGGCTTCGGTGGCAAGAAAGGGGAAAACG 900
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      ACGAGTCCACACGACGACCAGCCGCTCGAGTCCGCCATGGCTTCGCCTTCACCACCGCTA 960
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      AGCTCCGACGACGATGCAAGGTGAGCACATCTAGCTGTCCTACTCCCAACTTAGTACCCC 1020
consensus_6521#1      ------------------------------------------------------------
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      TCCCTAGATGCCTAACTACAGTACCATATCCCCCTCCCCCTCCACTAAATTCCTCTTCCA 1080
consensus_6521#1      --CCTAGATGCCTAANTACAGTACCATATCCCCCTCCCCCTCCACTAAATTCCTCTTCCA 58
consensus_6521#2      -------------------------------------------------TTCGTCCCCAT 11
                                                                       *** **  *  

consensus_6521#0      TGGCTGCATCGTTGTCTCGTTGAGTCACTAACTCACGTTCGGCGGTCCACAATAAGGGAC 1140
consensus_6521#1      TGGCTGCATCGTTGTCTCGTTGAGTCACTAACTCACGTTCGGCGGTCCACAATAAGGGAC 118
consensus_6521#2      TCCCCACGCCGTCGCAGGCTCGTAGC-CTAGCTAGCGGCGTGCCGGTGCCGACTCCCGAT 70
                      *  *  *  *** *     * *   * *** **  **    ** *    * *     ** 

consensus_6521#0      GCCAATGCGGTGTTGGACCAGCCATCGCATGCTAGACAGGTACCTAGAGGATGAGTTGGT 1200
consensus_6521#1      GCCAATGCGGTGTTGGACCAGCCATCGCATGCTAGACAGGTACCTAGAGGATGAGTTGGT 178
consensus_6521#2      CTCAATCTCGTA--GGGCCGCCGCGCGCCTGCCGCGTCAGCACCCAC--GCAGGGTCGCC 126
                        ****   **   ** **  *   *** ***       * *** *   *  * ** *  

consensus_6521#0      TTCAATTAATACAGAAAACTTTAAGATTCTTGATCGGTGGAAAGTGGCTAGGACA-AGCT 1259
consensus_6521#1      TTCAATTAATACAGAAAACTTTAAGATTCTTGATTGGTGGAAAGTGGCTAGGACA-AGCT 237
consensus_6521#2      GGCTTGTCGTGCTCGCGTCC-----GCGCAGGGCCGCTGC---GCCTCCAGGTCTCGGCA 178
                        *   *  * *      *         *  *   * **    *   * *** *   ** 

consensus_6521#0      TTCCTACATTGAGGAAGGTAGCACGAGATATATTTGCTATTCCTGTTAGCACTGTTGCAT 1319
consensus_6521#1      TTCCTACATTGAGGAAGGTAGCACGAGATATATTTGCTATTCCTGTTAGCACTGTTGCAT 297
consensus_6521#2      CTGCCGCACCAGGTCC--CAGCGCCACAGTCGTCTCGGTCTCTCGGCAGCACTGAGGACG 236
                       * *  **    *      *** * * *    * *     **  *  *******  *   

consensus_6521#0      CTGAATAT---GCATTTAGCACAAGTGGAAGGGTTCTTAGTGAGCATCGTAGCCGGCTTA 1376
consensus_6521#1      CTGAATAT---GCATTTAGCACAAGTGGAAGGGTTCTTAGTGAGCATCGTAGCCGGCTTA 354
consensus_6521#2      CCAAGGACTTGGCACCGGCCACCAGACGTGAAGGCTACGGTGG----CAAGAAAGACCTA 292
                      *  *  *    ***     *** **  *    *      ***     *      * * **

consensus_6521#0      CTCCAGAACTCTTGGAGGCCTTAATGTGCTCACAAGATTGGCTGCGA-AACAAGTATCGA 1435
consensus_6521#1      CTCCAGAACTCTTGGAGGCCTTAATGTGCTCACAAGATTGGCTGCGA-AACAAGTATCGA 413
consensus_6521#2      CTCC-GAACTAT-GTTTTTGTGTATGCCTGGACAACATGTGTAGCGGTGATAACTAATGA 350
                      **** ***** * *      *  ***     **** **  *  ***   * ** **  **

consensus_6521#0      GGTACATATGCTGTTTTATTCATACATCATGCTTAGCATAGATTTTACAATGCAATGGAT 1495
consensus_6521#1      G----------------------------------------------------------- 414
consensus_6521#2      GTGAT------------------------------------------------------- 355
                      *                                                           

consensus_6521#0      GCAAAATAATTCTTATAATTGTTATCTTGTAGCTGATAATGAAGAAGCAGCAAGCTTTTG 1555
consensus_6521#1      --------------------------------CTGATAATGAAGAAGCAGCAAGCTTTTG 442
consensus_6521#2      --------------------------------CGACTGGTGATTGATTAATGATCATGTG 383
                                                      *   *  ***   *  *   * * * **

consensus_6521#0      GAGTTGCCTTCAAGATATCCAAGATCAGATTGAGGGACTTGCTCTTGTTTGAAGACATGA 1615
consensus_6521#1      GAGTTGCCTTCAAGATATCCAAGATCAGATTGAGGGACTTGCTCTTGTTTGAAGACATGA 502
consensus_6521#2      TTATTGTGTT---GTTGCTTAATATGAGAATTTGATGGATAGTGTTGCTGAGGGG---AA 437
                         ***  **   * *    ** ** *** *  *     *  * *** *    *     *

consensus_6521#0      ATGTATGGACATGCACTGTTCTTGCAATGATTTTGGATGTT-TGTAACCCCTGTTATGTG 1674
consensus_6521#1      ATGTATGGACATGCACTGTTCTTGCAATGATTTTGGATGTT-TGTAACCCCTGTTATGTG 561
consensus_6521#2      ATTCTTGGGTACAAAT--TTGTTGTACTGCTTGTTGCTGCAATGCTGTTGCAACTGAATA 495
                      **   ***  *   *   ** *** * ** ** * * **   **      *   *   * 

consensus_6521#0      TCATGATAAACTTGTAAAA-CCATGGC-AATGCTTTTGGATATTTGGCACAAA-AGACCT 1731
consensus_6521#1      TCATGATAACCTTGTACAGTCCATGGCGAATGCTTTTGGATATTTGGCACAAAGAGACCT 621
consensus_6521#2      A-GTAATAAACT------------------------------------------------ 506
                         * **** **                                                

consensus_6521#0      A-CTCCGAA-CTATGGTTTTGTGTATGCCTAGGACAACATGTGTTGCTACTGCAATGTGG 1789
consensus_6521#1      AGCTCCGAAGCTATGGTCTTGTGTATGCATAGGACAACATCTGTTGCTACTGCAATGTGG 681
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      TGATAACTAATGAGTGATGACTGATGAATGATGAATGATCATGTATTATTGTGTTGTTGC 1849
consensus_6521#1      TGATTCTT---------------------------------------------------- 689
consensus_6521#2      ------------------------------------------------------------
                                                                                  

consensus_6521#0      TTAATCTGGGAATATGATGGATATTGT 1876
consensus_6521#1      ---------------------------
consensus_6521#2      ---------------------------
                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)