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Oryza sativa
cluster # 6524 cluster # 6524       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6524#0 length = 1173 sequences # 4  
consensusID : consensus_6524#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1173
fasta sequence 
                              [GGAGTCCGGAGTTCGCTCTCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCACCCCGCGAGCGGAGCAGCGGTGCCCGGCGTCGTCTGCTGCTTCCGCCGCATCCTCCCTCGCTCGCTGGGCAAGGATCTTTTATTGCTTTTCTTCCCCTGGAATTTTTTTAGCTAGCAAGGAACACGGTTGAAAGTAGGATGAGTCTCTCTACCATAGCAAGACGACTATGTTGTTCAAGACCAACATCTGGGGGTCGTCTTTCAGCGGTTTGGGCTCATTTGTACAGCACAGAGGCTGCCAAAGACACAGGTGCTAAGAAGTATAAATACCCTGAAGTCTATGATCCATACGGGCCTATGTCACCTCCATCGCAGAAAGTTGTGGATCTTGCTGATCGCATTGCTGCCCTCCCTCCTGAGGAGATCAAACAGATTGCTCCGGCTCTCCTTCTCAGACTGAACCAACCCCCACCACAGGCAATTTCTGGACAGGGTTTCAGTTTCAGTCCTCAAGGTGGT-GGCGGTGCTGCTGGTGCTGCAAAGGCAGAGGAGAAGAAAGCAGAGAAAACAGTCTTTGACGT-CAAGCTGGAGAAATTTGACGCTGCTGCTAAAATTAAGATCATCAAGGAGATTAGAACATTCACAGATTTGGGGCTGAAGGAGGCGAAGGAGCTAGTGGAGAAGGCCCCTGTCATTCTGAAGCAGTCACTCACGAAGGAGGAAGCTGAGGCAATCATAGAGAAGATTAAGGTAGCTGGCGGTGTCGCTGTGATGGAGTGAAGGATTAACTCCTTTGGCACTACTACCCTTTTGTTTTCTTCAATTTTTGTTAGCATGGTCAGGCATTAGAGGTCGCAGTATCTCTACACTTTTGTAGGAAATGTTCAGCTGTGACAGGTAAACATGGGCCATGATTTGGTCTGAATAAACTTTCTTCGACCACTACAACTTTCCTGATGTATTATTGTGACATTGGGACCGAGTGAATGGAATGTAGACAGAATTGCCTATGCTGATACCTGTAACTTGTTCTGCATCTGTTAATGTGACTTACAAGCATGCAGTTTTGGTTGAAGTGCAATGGGCATAGAGTACTTGAAACCTTGTCTGCAAGACTGCAACTCTTCATAATGTATTTCACTATCTGGTCTGAATTATACATCAAAAAAAA]

[+] EMBL CF335050             [GGAGTCCGGAGTTCGCTCTCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCACCCCGCGAGCGGAGCAGCGGTGCCCGGCGTCGTCTGCTGCTTCCGCCGCATCCTCCCTCGCTCGCTGGGCAAGGATCTTTTATTGCTTTTCTTCCCCTGGAATTTTTTTAGCTAGCAAGGAACACGGTTGAAAGTAGGATGAGTCTCTCTACCATAGCAAGACGACTATGTTGTTCAAGACCAACATCTGGGGGTCGTCTTTCAGCGGTTTGGGCTCATTTGTACAGCACAGAGGCTGCCAAAGACACAGGTGCTAAGAAGTATAAATACCCTGAAGTCTATGATCCATACGGGCCTATGTCACCTCCATCGCAGAAAGTTGTGGATCTTGCTGATCGCATTGCTGCCCTCCCTCCTGAGGAGATCAAACAGATTGCTCCGGCTCTCCTTCTCAGACTGAACCAACCCCCACCACAGGCAATTTCTGGACAGGGTTTCAGTTTCAGTCCTCAAGGTGGTGGGCGGTGCTGCTGGTGCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK070231             [                      GCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCACCCCGCGAGCGGAGCAGCGGTGCCCGGCGTCGTCTGCTGCTTCCGCCGCATCCTCCCTCGCTCGCTGGGCAAGGATCTTTTATTGCTTTTCTTCCCCTGGAATTTTTTTAGCTAGCAAGGAACACGGTTGAAAGTAGGATGAGTCTCTCTACCATAGCAAGACGACTATGTTGTTCAAGACCAACATCTGGGGGTCGTCTTTCAGCGGTTTGGGCTCATTTGTACAGCACAGAGGCTGCCAAAGACACAGGTGCTAAGAAGTATAAATACCCTGAAGTCTATGATCCATACGGGCCTATGTCACCTCCATCGCAGAAAGTTGTGGATCTTGCTGATCGCATTGCTGCCCTCCCTCCTGAGGAGATCAAACAGATTGCTCCGGCTCTCCTTCTCAGACTGAACCAACCCCCACCACAGGCAATTTCTGGACAGGGTTTCAGTTTCAGTCCTCAAGGTGGT GGCGGTGCTGCTGGTGCTGCAAAGGCAGAGGAGAAGAAAGCAGAGAAAACAGTCTTTGACGT CAAGCTGGAGAAATTTGACGCTGCTGCTAAAATTAAGATCATCAAGGAGATTAGAACATTCACAGATTTGGGGCTGAAGGAGGCGAAGGAGCTAGTGGAGAAGGCCCCTGTCATTCTGAAGCAGTCACTCACGAAGGAGGAAGCTGAGGCAATCATAGAGAAGATTAAGGTAGCTGGCGGTGTCGCTGTGATGGAGTGAAGGATTAACTCCTTTGGCACTACTACCCTTTTGTTTTCTTCAATTTTTGTTAGCATGGTCAGGCATTAGAGGTCGCAGTATCTCTACACTTTTGTAGGAAATGTTCAGCTGTGACAGGTAAACATGGGCCATGATTTGGTCTGAATAAACTTTCTTCGACCACTACAACTTTCCTGATGTATTATTGTGACATTGGGACCGAGTGAATGGAATGTAGACAGAATTGCCTATGC                                                                                                                                                              ]
[-] EMBL CA763551             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTCAGTTTCAGTCCTCAAGGTGGT GGCGGTGCTGCTGGTGCTGCAAAGGCAGAGGAGAAGAAAGCAGAGAAAACAGTC TTGACGTCCAAGCTGGAGAAATTTGACGCTGCTGCTAAAATTAAGATCATCAAGGAGATTAGAACATTCACAGATTTGGGGCTGAAGGAGGCGAAGGAGCTAGTGGAGAAGGCCCCTGTCATTCTGAAGCAGTCACTCACGAAGGAGGAAGCTGAGGCAATCATAGAGAAGATTAAGGTAGCTGGCGGTGTCGCTGTGATGGAGTGAAGGATTAACTCCTTTGGCACTACTACCCTTTTGTTTTCTTCAATTTTTGTTAGCATGGTCAGGCATTAGAGGTCGCAGTATCTCTACACTTTTGTAGGAAATGTTCAGCTGTGACAGGTAAACATGGGCCATGATTTGGTCTGAATAAACTTTCTTCGACCACTACAACTTTCCTGATGTATTATGGTGACATTGGGACCGAGTGAATGGAATGTAGACAGAATTGCCTATGCTGATACCTGTAACTTGTTCTGCATCTGTTAATGTGACTTACAAGCATGCAGTTTTGGTTGAAGTGCAATGGGCATAGAGTACTTGAAACCTTGTCTGCAAGACTGCAACTCTTCATAATGTATTTCACTATCTGGTCTGAATTATACATCAAAAAAAA]
[-] EMBL CF335051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGTTTCAGTCCTCAAGGTGGT GGCGGTGCTGCTGGTGCTGCAAAGGCAGAGGAGAAGAAAGCAGAGAAAACAGTCTTTGACGT CAAGCTGGAGAAATTTGACGCTGCTGCTAAAATTAAGATCATCAAGGAGATTAGAACATTCACAGATTTGGGGCTGAAGGAGGCGAAGGAGCTAGTGGAGAAGGCCCCTGTCATTCTGAAGCAGTCACTCACGAAGGAGGAAGCTGAGGCAATCATAGAGAAGATTAAGGTAGCTGGCGGTGTCGCTGTGATGGAGTGAAGGATTAACTCCTTTGGCACTACTACCCTTTTGTTTTCTTCAATTTTTGTTAGCATGGTCAGGCATTAGAGGTCGCAGTATCTCTACACTTTTGTAGGAAATGTTCAGCTGTGACAGGTAAACATGGGCCATGATTTGGTCTGAATAAACTTTCTTCGACCACTACAACTTTCCTGATGTATTATTGTGACATTGGGACCGAGTGAATGGAATGTAGACAGAATTGCCTATGCTGATACCTGTAACTTGTTCTGCATCTGTTATTGTAACTTACAAGCATGCAGTTTTGGTTGAAaaaaaa                                                                                          ]




>consensus_6524#0
GGAGTCCGGAGTTCGCTCTCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTC
CACCCCGCGAGCGGAGCAGCGGTGCCCGGCGTCGTCTGCTGCTTCCGCCGCATCCTCCCT
CGCTCGCTGGGCAAGGATCTTTTATTGCTTTTCTTCCCCTGGAATTTTTTTAGCTAGCAA
GGAACACGGTTGAAAGTAGGATGAGTCTCTCTACCATAGCAAGACGACTATGTTGTTCAA
GACCAACATCTGGGGGTCGTCTTTCAGCGGTTTGGGCTCATTTGTACAGCACAGAGGCTG
CCAAAGACACAGGTGCTAAGAAGTATAAATACCCTGAAGTCTATGATCCATACGGGCCTA
TGTCACCTCCATCGCAGAAAGTTGTGGATCTTGCTGATCGCATTGCTGCCCTCCCTCCTG
AGGAGATCAAACAGATTGCTCCGGCTCTCCTTCTCAGACTGAACCAACCCCCACCACAGG
CAATTTCTGGACAGGGTTTCAGTTTCAGTCCTCAAGGTGGTGGCGGTGCTGCTGGTGCTG
CAAAGGCAGAGGAGAAGAAAGCAGAGAAAACAGTCTTTGACGTCAAGCTGGAGAAATTTG
ACGCTGCTGCTAAAATTAAGATCATCAAGGAGATTAGAACATTCACAGATTTGGGGCTGA
AGGAGGCGAAGGAGCTAGTGGAGAAGGCCCCTGTCATTCTGAAGCAGTCACTCACGAAGG
AGGAAGCTGAGGCAATCATAGAGAAGATTAAGGTAGCTGGCGGTGTCGCTGTGATGGAGT
GAAGGATTAACTCCTTTGGCACTACTACCCTTTTGTTTTCTTCAATTTTTGTTAGCATGG
TCAGGCATTAGAGGTCGCAGTATCTCTACACTTTTGTAGGAAATGTTCAGCTGTGACAGG
TAAACATGGGCCATGATTTGGTCTGAATAAACTTTCTTCGACCACTACAACTTTCCTGAT
GTATTATTGTGACATTGGGACCGAGTGAATGGAATGTAGACAGAATTGCCTATGCTGATA
CCTGTAACTTGTTCTGCATCTGTTAATGTGACTTACAAGCATGCAGTTTTGGTTGAAGTG
CAATGGGCATAGAGTACTTGAAACCTTGTCTGCAAGACTGCAACTCTTCATAATGTATTT
CACTATCTGGTCTGAATTATACATCAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)