These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6543#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3914 fasta sequence [AAGCAGGTTGTGATAGAAGGATTTAAGAGCTACAGGGAGGAGATCTCAACAGAACCTTTCAGCCCCAAAGTTAATGTAGTTGTTGGGGCAAATGGATCTGGCAAATCAAATTTCTTCCATGCTATACGGTTTGTCCTCAGTGACATGTTTCAAAACCTGCGCAGTGAAGACAGGGGCGCTCTTCTTCATGAAGGTGCTGGTCACTCGGTTGTCTCGGCTTTTGTTGAGATAGTGTTTGATAATTCAGACAACCGTATTCCAGTTGACAAAGAGGAGGTACGCCTGCGCAGGACAGTTGCTTCAAAGAAGGATGAATACTACTTGGATGGGAAGCATGTTAGTAAAACTGAAGTCATGAATCTGCTAGAGAGTGCTGGATTTTCTCGCTCTAATCCATACTACGTTGTCCAGCAGGGAAAGATTGCATCCCTTACCCTAATGAAAGATTCCGAACGGCTGGATCTCCTCAAAGAGATCGGTGGTACGCGCGTTTATGAAGATAGACGACGCGAGAGTTTGAAAATCATGCAGGAAACAGGCAACAAAAGAAAGCAGATTGATCAAGTTGTCCACTACTTGGAGGAAAGGTTGAGAGAACTTGATGAAGAGAAAGAAGAACTGAAGAAGTACCAGCAGCTGGACAAACAAAGAAGATCACTTGAGTATACCATACTGGACCATGAACTAAATGAGGCTAGGAACGAATTAGCTTCGGTAGATGATAACCGAAGAAAAATTTCTGAAAGAATGTCCCATGCGGATAATGAAGTGGTAGATGTACGTGAGAAGGTGAAGACTTTTGACAAAGAAATAAAATACTCAACTAAGGGGATAAATGATACCAAGGCTCAAAAGGAAGGTGTAGAGAAGAAGCGTACAGAAGCACTGAAGGTAGTTGCTCAGATTGAGCTTGATTTGAGAGACATAAAAGACAGAATCTTGAACGAGAAACGGGCAAAGGATGAAGCTGCGAAGGATTTACAAAGCGTGAGGATGG-AGAGTGAAAAGTCAAAGTCCGAATTAGCTGAAATTAGTAAGGTGCATCAAGCC-AAATTAAAGGAAGAGGAAGAAATATCAAAAAGCATAATGGACCGTGAGAAGCGGTTAAGTATATTGTACCAAAAGCAGGGGAGGGCAACCCAATTCGCAAACAAAGCTGCCAGAGATAAGTGGCTTCAAAAGGAAATTGATGATCTTGAGCGTGTGCTTTTATCAAATCGAAAGCAGGAAGGTTTACTTCAAGAAGAAATCCAGAAGCTTAAAGATGAAATCAATAACTTGAATAGCTACATTGAGTCCCGGAAAAGTGAATCAAGCAAATTAGAGTCTGCACTAGCAAAGAAACACAATGACTACAATGACTTGAGGAAGCAGAGAGATGAGCTTCAAGAAGAAAGGAAGTCATTTTGGAAGGAGGAAGCTGATGTGACAGCTGAAATTGATAGGCTAAAGGATGATCTTGTGAAGGCACAAAAGAGTTTGGACCATGCAACACCTGGGGATATCAGAAGAGGCTTGAATTCTGTTAGCAGAATCATCAGGGACCATGGTATTACAGGAGTTTTTGGTCCTGTTTTAGAGCTGGTTGATTGTGAAGAGAAGTTCTTCACTGCTGTTGAGGTCACTGCAGGGAATAGTTTGTTCCATGTGGTTGTTGAGAATGACGATATATCAACAAGAATCATTCAAGTATTGACTCGAGAAAAAGGTGGGCGGGTGACTTTTATACCACTGAATAGAGTGAAAGTTCCAGATGTTAGTTGCCCCCAAAGTCCCGATTTCGTTCCATTGTTGAAGAAACTAAAATATCGGGCCGATCATCGCCGTGCCTTTGAACAGGTATTTGGCAGAACAGTAATATGCCGAGACCTGGAAACTGCGACCAAAGTTGCACGCGGCAATGGGCTGGATTGCATCACACTTGATGGTGATCAAGTTGCCAGAAAAGGTGGCATGACAGGAGGTTTCTATGACTCTAGACGCTCAAAACTGAAGTTTGTGAAAATAATTAGGGACAATAAAACTGCAATTGAGAAAAAGGCAGCACATCTAGAGAATGTGGGAAGCAAGCTAAGAGATATCATAGATAAGAAAATTACAGATTTAGTTACCAAACAGCAGCAAATGGATGCTGAGCGTGACCATGCCAAATCAGAGTTGGAACAATTTAAGGTTGACATCGCTAGCGCTATGAAGCAAATGGTATCACTTGACAAGGCACTTGGAAAGAAGGAAAAATCACTTGACAACATCCGGAACCAAATTGAGCAAATCCAATCTGGCATTGCAATGAAAAATGATGAAATGGGCACTGAACTTATTGATCAGTTAACTTCAGAAGAACGAGATCTTCTTTCACGATTGAACCCTGAAATTACTGAACTAAAGGAGAAGTTTCTCTTATGTAAAAACAGTCGCATCGAGATTGAAACAAGGAAAGAAGAACTGGAAACCAATCTATCAACTAATCTTATGAGGCGCCAGAAAGAGCTTGAAGCAATAATTTCATCTGCAGACTCTAAGACCTTGCCTCTTGAAGCTGAATCGAAAGAGCAAGAACTAAAAAGTTCGAAGAGGAGTCTTGATGAATTGACTGCAATGTTGAAGGCTAATGTCGATGCTATTAATAACTTCACAAGGAAGATTGAGGAACTGAAAAGACAGAGAGATAATCTGAAGGCACTAGAAGCTAACCTGGAGCAGACCGTACAAGATGGTGCCAAGGATTTGGAACAGCTCATGAGCAGCAGGAGCATGCATTTAGCTAAGCAAGAGGAGTGTATGAAGAAGATCCGAGACTTGGGCTCATTGCCTGCAGATGCTTTTGAAACGTACAAGCGGAAAAATAAGAAGCAGCTGCAGAAGATGCTTTATGACTGCAATGAGCAATTGCAGCAGTTCAGTCATGTCAACAAAAAAGCTCTTGACCAGTATGTTAACTTCACCGAACAACGTGAACAACTACAGAGAAGACGGGCTGAACTTGATGCTGGTGATCAGAAAATCAGAGAACTAATATCAGTTTTAGACCAAAGGAAGGACGAATCAATCGAACGTACATTTAAAGGTGTTGCAAGGCACTTCCGTGAAGTGTTCTCTGAACTAGTGCAAGGTGGCCATGGACATTTGGTTATGATGAGGAAAAAGGATGGTGATGCAGATGATGATGATAATGATGAGGATGGGCCTCGTGAACCAGATCCTGAAGGGAGAATTGAGAAGTACATTGGTGTAAAAGTCAAGGTTTCCTTTACTGGCAAGGGAGAAACACAGTCTATGAAACAGTTGTCTGGTGGACAGAAGACAGTGGTGGCATTGACACTGATTTTTGCCATTCAGCGTTGTGATCCAGCCCCATTCTATCTGTTTGATGAGATCGATGCTGCTCTGGATCCACAGTACAGAACAGCTGTCGGCAGTATCATCCGCCGTCTAGCTGACATGGCTGACACTCAGTTTATAGCAACGACATTCCGACCAGAAATTGCAAAAGTTGCTGATAAGATCTATGGTGTGACGCACAAGAACAGGGTTAGCTACATCAATGTGGTGTCAAAGGAGCAAGCTCTGGACTTCATTGAGCATGACCAGACACACAACGCTAGCTGAGACTAAATGCGCTTTTGCCAGTGGTGTGCTGCAGGCAGATGCTAACGTAGAGGTAGTGGAAGCAGGCTGAAATCTGGCTTTGCCTGGATGTTCTATTTCCATGGTTGGATAATTGTACTAGTTGTGAATATGTAGTTAGCCTTTGGACTTGTAAGTTTCAGCTGATGGGTAGATTGTGTTATCATTATGTTCTGTTTAGGATAGCACATGTATTCAGTGGTACATGCATCGGCGACGTGGTTGTAACATCGCTATTTATTCTTGTATACATTATAACCTACCGCTTACTACCAATGGGAATTTAT] [+] EMBL OSA535211 [AAGCAGGTTGTGATAGAAGGATTTAAGAGCTACAGGGAGGAGATCTCAACAGAACCTTTCAGCCCCAAAGTTAATGTAGTTGTTGGGGCAAATGGATCTGGCAAATCAAATTTCTTCCATGCTATACGGTTTGTCCTCAGTGACATGTTTCAAAACCTGCGCAGTGAAGACAGGGGCGCTCTTCTTCATGAAGGTGCTGGTCACTCGGTTGTCTCGGCTTTTGTTGAGATAGTGTTTGATAATTCAGACAACCGTATTCCAGTTGACAAAGAGGAGGTACGCCTGCGCAGGACAGTTGCTTCAAAGAAGGATGAATACTACTTGGATGGGAAGCATGTTAGTAAAACTGAAGTCATGAATCTGCTAGAGAGTGCTGGATTTTCTCGCTCTAATCCATACTACGTTGTCCAGCAGGGAAAGATTGCATCCCTTACCCTAATGAAAGATTCCGAACGGCTGGATCTCCTCAAAGAGATCGGTGGTACGCGCGTTTATGAAGATAGACGACGCGAGAGTTTGAAAATCATGCAGGAAACAGGCAACAAAAGAAAGCAGATTGATCAAGTTGTCCACTACTTGGAGGAAAGGTTGAGAGAACTTGATGAAGAGAAAGAAGAACTGAAGAAGTACCAGCAGCTGGACAAACAAAGAAGATCACTTGAGTATACCATACTGGACCATGAACTAAATGAGGCTAGGAACGAATTAGCTTCGGTAGATGATAACCGAAGAAAAATTTCTGAAAGAATGTCCCATGCGGATAATGAAGTGGTAGATGTACGTGAGAAGGTGAAGACTTTTGACAAAGAAATAAAATACTCAACTAAGGGGATAAATGATACCAAGGCTCAAAAGGAAGGTGTAGAGAAGAAGCGTACAGAAGCACTGAAGGTAGTTGCTCAGATTGAGCTTGATTTGAGAGACATAAAAGACAGAATCTTGAACGAGAAACGGGCAAAGGATGAAGCTGCGAAGGATTTACAAAGCGTGAGGATGG AGAGTGAAAAGTCAAAGTCCGAATTAGCTGAAATTAGTAAGGTGCATCAAGCC AAATTAAAGGAAGAGGAAGAAATATCAAAAAGCATAATGGACCGTGAGAAGCGGTTAAGTATATTGTACCAAAAGCAGGGGAGGGCAACCCAATTCGCAAACAAAGCTGCCAGAGATAAGTGGCTTCAAAAGGAAATTGATGATCTTGAGCGTGTGCTTTTATCAAATCGAAAGCAGGAAGGTTTACTTCAAGAAGAAATCCAGAAGCTTAAAGATGAAATCAATAACTTGAATAGCTACATTGAGTCCCGGAAAAGTGAATCAAGCAAATTAGAGTCTGCACTAGCAAAGAAACACAATGACTACAATGACTTGAGGAAGCAGAGAGATGAGCTTCAAGAAGAAAGGAAGTCATTTTGGAAGGAGGAAGCTGATGTGACAGCTGAAATTGATAGGCTAAAGGATGATCTTGTGAAGGCACAAAAGAGTTTGGACCATGCAACACCTGGGGATATCAGAAGAGGCTTGAATTCTGTTAGCAGAATCATCAGGGACCATGGTATTACAGGAGTTTTTGGTCCTGTTTTAGAGCTGGTTGATTGTGAAGAGAAGTTCTTCACTGCTGTTGAGGTCACTGCAGGGAATAGTTTGTTCCATGTGGTTGTTGAGAATGACGATATATCAACAAGAATCATTCAAGTATTGACTCGAGAAAAAGGTGGGCGGGTGACTTTTATACCACTGAATAGAGTGAAAGTTCCAGATGTTAGTTGCCCCCAAAGTCCCGATTTCGTTCCATTGTTGAAGAAACTAAAATATCGGGCCGATCATCGCCGTGCCTTTGAACAGGTATTTGGCAGAACAGTAATATGCCGAGACCTGGAAACTGCGACCAAAGTTGCACGCGGCAATGGGCTGGATTGCATCACACTTGATGGTGATCAAGTTGCCAGAAAAGGTGGCATGACAGGAGGTTTCTATGACTCTAGACGCTCAAAACTGAAGTTTGTGAAAATAATTAGGGACAATAAAACTGCAATTGAGAAAAAGGCAGCACATCTAGAGAATGTGGGAAGCAAGCTAAGAGATATCATAGATAAGAAAATTACAGATTTAGTTACCAAACAGCAGCAAATGGATGCTGAGCGTGACCATGCCAAATCAGAGTTGGAACAATTTAAGGTTGACATCGCTAGCGCTATGAAGCAAATGGTATCACTTGACAAGGCACTTGGAAAGAAGGAAAAATCACTTGACAACATCCGGAACCAAATTGAGCAAATCCAATCTGGCATTGCAATGAAAAATGATGAAATGGGCACTGAACTTATTGATCAGTTAACTTCAGAAGAACGAGATCTTCTTTCACGATTGAACCCTGAAATTACTGAACTAAAGGAGAAGTTTCTCTTATGTAAAAACAGTCGCATCGAGATTGAAACAAGGAAAGAAGAACTGGAAACCAATCTATCAACTAATCTTATGAGGCGCCAGAAAGAGCTTGAAGCAATAATTTCATCTGCAGACTCTAAGACCTTGCCTCTTGAAGCTGAATCGAAAGAGCAAGAACTAAAAAGTTCGAAGAGGAGTCTTGATGAATTGACTGCAATGTTGAAGGCTAATGTCGATGCTATTAATAACTTCACAAGGAAGATTGAGGAACTGAAAAGACAGAGAGATAATCTGAAGGCACTAGAAGCTAACCTGGAGCAGACCGTACAAGATGGTGCCAAGGATTTGGAACAGCTCATGAGCAGCAGGAGCATGCATTTAGCTAAGCAAGAGGAGTGTATGAAGAAGATCCGAGACTTGGGCTCATTGCCTGCAGATGCTTTTGAAACGTACAAGCGGAAAAATAAGAAGCAGCTGCAGAAGATGCTTTATGACTGCAATGAGCAATTGCAGCAGTTCAGTCATGTCAACAAAAAAGCTCTTGACCAGTATGTTAACTTCACCGAACAACGTGAACAACTACAGAGAAGACGGGCTGAACTTGATGCTGGTGATCAGAAAATCAGAGAACTAATATCAGTTTTAGACCAAAGGAAGGACGAATCAATCGAACGTACATTTAAAGGTGTTGCAAGGCACTTCCGTGAAGTGTTCTCTGAACTAGTGCAAGGTGGCCATGGACATTTGGTTATGATGAGGAAAAAGGATGGTGATGCAGATGATGATGATAATGATGAGGATGGGCCTCGTGAACCAGATCCTGAAGGGAGAATTGAGAAGTACATTGGTGTAAAAGTCAAGGTTTCCTTTACTGGCAAGGGAGAAACACAGTCTATGAAACAGTTGTCTGGTGGACAGAAGACAGTGGTGGCATTGACACTGATTTTTGCCATTCAGCGTTGTGATCCAGCCCCATTCTATCTGTTTGATGAGATCGATGCTGCTCTGGATCCACAGTACAGAACAGCTGTCGGCAGTATCATCCGCCGTCTAGCTGACATGGCTGACACTCAGTTTATAGCAACGACATTCCGACCAGAAATTGCAAAAGTTGCTGATAAGATCTATGGTGTGACGCACAAGAACAGGGTTAGCTACATCAATGTGGTGTCAAAGGAGCAAGCTCTGGACTTCATTGAGCATGACCAGACACACAA ] [+] EMBL BQ907867 [ ATGATACCAAGGCTCAAAAGGAAGGTGTAGAGAAGAAGCGTACAGAAGCACTGAAGGTAGTTGCTCAGATTGAGCTTGATTTGAGAGACAT AAAGACAGAATCTTGAACGAGAAACGGGCAAAGGATGAA CTGCGAAGGATTTACAAAGCGTGAGGATGGTAGAGTGAAAAGTCAAAGTCCGAATTAGCTGAAATTAGTAAGGTGCATCAAGCCAAAATTAAAaaaaaaa ] [+] EMBL OSR2860A [ AAGAAACACAATGACTACAATGACTTGAGGAAGCAGAGAGATGAGCTTCAAGAAGAAAGGAAATCATTTTGGAAGGAGGAAGCTGATGTGACAGCTGAAATTGATAGGCTAAAGGATGATCTTGTGAAGGCACAAAAGAGTTTGGACCATGCAACACCTGGGGATATCAGAAGAGGCTTGAATTCTGTTAGCAGAATCATCAGGGACCATGGTATTACAGGAGTTTTTGGTCCTGTTTTAGAGCTGGTTGATTGTGAAGAGAAGTTCTTCACTGCTGTTGAGGTCACTGCAGGGAACAGTTTGTTCCATGTGGTTGTTGAGAATGACGATATATCAACANGAATCATTCAAGTATTGACTCGAGAAAAAGGTGGGCGGGTGACTTT ] [+] EMBL AK105135 [ TCGTGAACCAGATCCTGAAGGGAGAATTGAGAAGTACATTGGTGTAAAAGTCAAGGTTTCCTTTACTGGCAAGGGAGAAACACAGTCTATGAAACAGTTGTCTGGTGGACAGAAGACAGTGGTGGCATTGACACTGATTTTTGCCATTCAGCGTTGTGATCCAGCCCCATTCTATCTGTTTGATGAGATCGATGCTGCTCTGGATCCACAGTACAGAACAGCTGTCGGCAATATGATCCGCCGTCTAGCTGACATGGCTGACACTCAGTTTATAGCAACGACATTCCGACCAGAAATTGCAAAAGTTGCTGATAAGATCTATGGTGTGACGCACAAGAACAGGGTTAGCTACATCAATGTGGTGTCAAAGGAGCAAGCTCTGGACTTCATTGAGCATGACCAGACACACAACGCTAGCTGAGACTAAATGCGCTTTTGCCAGTGGTGTGCTGCAGGCAGATGCTAACGTAGAGGTAGTGGAAGCAGGCTGAAATCTGGCTTTGCCTGGATGTTCTATTTCCATGGTTGGATAATTGTACTAGTTGTGAATATGTAGTTAGCCTTTGGACTTGTAAGTTTCAGCTGATGGGTAGATTGTGTTATCATTATGTTCTGTTTAGGATAGCACATGTATTCAGTGGTACATGCATCGGCGACGTGGTTGTAACATCGCTATTTATTCTTGTATACATTATAACCTACCGCTTACTACCAATGGGAATTTAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||