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Oryza sativa
cluster # 6548 cluster # 6548       Sequences # 4       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6548#0 length = 2438 sequences # 3  
consensus_6548#1 length = 874 sequences # 1  

consensusID : consensus_6548#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2438
fasta sequence
                              [GAGGCGAGGCAGAGGAGTGGAGCAGCATCCGAATCCGGCCACCTCATCATCTCGCCTCGCTTCCCGGCGGAGATCGCGAGGGCGACGGCGGCGGCGGCGGCAAGCTGCCTCCGACGAGCCCAGGCAGAAAAGGAGTTATGGATGTTGAGAACAGTATGGATGATGACCATTTCCAACAAAACATGGGTAATGGAGATGGAATGAATGTAGAAGGAGGAAGTATGGAAATTATTACTAGAGTGGAACTTGAGCTTGCATTTGCCTCTGAGAAATTACTAAATCTAGAGATGTTGGTGATGGAGATAGCTCGCAAGGCTACTGATTTTGAGCCTCCTACATTGGAAGACGAATCTGTTTCTTCTGAAACTGCCGAGAGTGCTTTTGAATTGGACATCCTATATGGTTTTCTAGATGCAGAAGTAGGGGAGTTAGATGACATGATCAGTACTCTTGAGACTGATATTCAAAATGTTGAGCATATGGTTTGTCAAGATGAATCTGGAGGCAAGATTAAAGCTAGGCTAGATGCTGCTATGGTGTCTTTAAAGCAGATGAAGGAATTAGTTTCTGATATCAGAAAAGAGTCAGCCAAGTTTGAGAAAGCCATAGAGTTTCCCCATGACAAAGAAGGCATTACTGGAGACGCTGGGTATGAAAATGGTATTGTGTCATCCCACACTAGCATGAGGACAGAGGATCAACGAAGAAATGTTTTGCAGATGTTAGAACAATCGATAGCAAGTGAGCTGGATCTTGAAAAGAAGCTCTCTGAATCAAGATGTATTATAGAAGAACTCAAACTAAAGCTCCATCATCATGATCAGGAAAAATATTTCCTGGAGGAATCTATCGAATCATTATGTGGGAAAACATTTGCAGCAGAAAACGCTTCTGAGGTACTCTTGGGAACTTCAAAAGAACTTGTGGACAAAGTTAGTACCGTAGAGTGCCATCTAAGTGCATCAAGATGTAGGGAGGGTGATCTGGAGTCGAAGTTAGGAGAAAGCTTGATGGGATTATCTTCACTGCAAGTCAACGCAGAGAATATTCAAGAAGGGAGTCAACATAGTGGAGGCACAGAAACTCATCCAAGTCCTGAATTGCCATCCTTGCAGGATAAGGTTAAGGAGCTAGAAAAACAGTTGAGGGAATCTGATTCACAGTTGCAGTTGGCAAAGGCATCAGCAGAAACTTTTCAGGAGGAGCAGAATGTGCTGCATGCCGAGATAAGCACATTAGAAAACATTATTAAGAGTCTCAAAGAAGATGTCTCAAGAGCAGAAAGTAGAGCACAAAATGCTGAGTTAAGGTGCATGCAGCTAACTGAAGCTAACATAGAACTTAATGGGGAGCTAAACTCTCTTAAAAGTCATGGTTCAGAAAAGACTAGCCTTTTGGAGAGGAAACTTAAGGAGTCACATACCCAATTAGAGCATGCAAAGGCATCTCTTGATGCCACTGTTGAACAGCAGAGTATGCTGAGATCTACAATGTCGGACATGGAACATATGATTGATGATCTGAAGGGAAAGGTTTTAAAAGCTGAAACCAGAGCAGAGAATGCTGAATCTAAGTGTACATTGTTAACAGACACTAACTTAGAACTTAGTGAGGAGCTATCGTTTCTGAGGGGTCGAGCAGAAAGTCTAGAGAACTCATTACATGAAGCCAACCATGTTAAGATGTCTACCGTCAAGGATATTGGAATCAGAACAAAAATAATTACTGATTTGGTCACAAAACTTGCATTGGAAAGAGAACGACTTCATCAACAGATTTCGTTGTTGACAAAGAAAAACAAGATATTGGCTCAGAAGTGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCAAAAATGTTACTGGCAAAGATGTTGAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTCCTGATTTTTCTTCATCACAGACTAAGGCTGAGAAACCTGTAGACCCTAGCAATGAGGAAGAGAAGACGAGGTCTTCAGAGGATGATGACTCTGGCGGGGAGGGCACTGCTGAGGCAGTCCGGACCATACAGCCGTCAGTGCTGAACTGGAAGTACATCACCGTGGCATTCCTGATCTTGTTAGTCGCTGTCTTCATATACTTGCCACTCCCAGAAGAAAGCAGCTCCGTTTGAAGAGGCCAATGCAATGATGGCTAATGTAGTCTGTAGTGTGTACACTATTTACATCCCTGTTTTTTTTTTCTTTGTTTGTTTCACCCCCTTTCTGCTCATAGAATAAGCAATTTTTGGTGCTGTAGACTGTGATATGTAGTGTTCAGATCTGGCCTGAACTCGGTAGTGATGCACTGATGCTCCTGGATGAGTGATTGTAAACTCTTAGTTTGGCTGCCATTGCCCAGTCTTTTGGCCTCTAAGACAAATGGTTATGACTTGTGAGTTGTGACTAGTAAATTTCCTTCTGTT]

[+] EMBL AK068369             [GAGGCGAGGCAGAGGAGTGGAGCAGCATCCGAATCCGGCCACCTCATCATCTCGCCTCGCTTCCCGGCGGAGATCGCGAGGGCGACGGCGGCGGCGGCGGCAAGCTGCCTCCGACGAGCCCAGGCAGAAAAGGAGTTATGGATGTTGAGAACAGTATGGATGATGACCATTTCCAACAAAACATGGGTAATGGAGATGGAATGAATGTAGAAGGAGGAAGTATGGAAATTATTACTAGAGTGGAACTTGAGCTTGCATTTGCCTCTGAGAAATTACTAAATCTAGAGATGTTGGTGATGGAGATAGCTCGCAAGGCTACTGATTTTGAGCCTCCTACATTGGAAGACGAATCTGTTTCTTCTGAAACTGCCGAGAGTGCTTTTGAATTGGACATCCTATATGGTTTTCTAGATGCAGAAGTAGGGGAGTTAGATGACATGATCAGTACTCTTGAGACTGATATTCAAAATGTTGAGCATATGGTTTGTCAAGATGAATCTGGAGGCAAGATTAAAGCTAGGCTAGATGCTGCTATGGTGTCTTTAAAGCAGATGAAGGAATTAGTTTCTGATATCAGAAAAGAGTCAGCCAAGTTTGAGAAAGCCATAGAGTTTCCCCATGACAAAGAAGGCATTACTGGAGACGCTGGGTATGAAAATGGTATTGTGTCATCCCACACTAGCATGAGGACAGAGGATCAACGAAGAAATGTTTTGCAGATGTTAGAACAATCGATAGCAAGTGAGCTGGATCTTGAAAAGAAGCTCTCTGAATCAAGATGTATTATAGAAGAACTCAAACTAAAGCTCCATCATCATGATCAGGAAAAATATTTCCTGGAGGAATCTATCGAATCATTATGTGGGAAAACATTTGCAGCAGAAAACGCTTCTGAGGTACTCTTGGGAACTTCAAAAGAACTTGTGGACAAAGTTAGTACCGTAGAGTGCCATCTAAGTGCATCAAGATGTAGGGAGGGTGATCTGGAGTCGAAGTTAGGAGAAAGCTTGATGGGATTATCTTCACTGCAAGTCAACGCAGAGAATATTCAAGAAGGGAGTCAACATAGTGGAGGCACAGAAACTCATCCAAGTCCTGAATTGCCATCCTTGCAGGATAAGGTTAAGGAGCTAGAAAAACAGTTGAGGGAATCTGATTCACAGTTGCAGTTGGCAAAGGCATCAGCAGAAACTTTTCAGGAGGAGCAGAATGTGCTGCATGCCGAGATAAGCACATTAGAAAACATTATTAAGAGTCTCAAAGAAGATGTCTCAAGAGCAGAAAGTAGAGCACAAAATGCTGAGTTAAGGTGCATGCAGCTAACTGAAGCTAACATAGAACTTAATGGGGAGCTAAACTCTCTTAAAAGTCATGGTTCAGAAAAGACTAGCCTTTTGGAGAGGAAACTTAAGGAGTCACATACCCAATTAGAGCATGCAAAGGCATCTCTTGATGCCACTGTTGAACAGCAGAGTATGCTGAGATCTACAATGTCGGACATGGAACATATGATTGATGATCTGAAGGGAAAGGTTTTAAAAGCTGAAACCAGAGCAGAGAATGCTGAATCTAAGTGTACATTGTTAACAGACACTAACTTAGAACTTAGTGAGGAGCTATCGTTTCTGAGGGGTCGAGCAGAAAGTCTAGAGAACTCATTACATGAAGCCAACCATGTTAAGATGTCTACCGTCAAGGATATTGGAATCAGAACAAAAATAATTACTGATTTGGTCACAAAACTTGCATTGGAAAGAGAACGACTTCATCAACAGATTTCGTTGTTGACAAAGAAAAACAAGATATTGGCTCAGAAGTGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCAAAAATGTTACTGGCAAAGATGTTGAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTCCTGATTTTTCTTCATCACAGACTAAGGCTGAGAAACCTGTAGACCCTAGCAATGAGGAAGAGAAGACGAGGTCTTCAGAGGATGATGACTCTGGCGGGGAGGGCACTGCTGAGGCAGTCCGGACCATACAGCCGTCAGTGCTGAACTGGAAGTACATCACCGTGGCATTCCTGATCTTGTTAGTCGCTGTCTTCATATACTTGCCACTCCCAGAAGAAAGCAGCTCCGTTTGAAGAGGCCAATGCAATGATGGCTAATGTAGTCTGTAGTGTGTACACTATTTACATCCCTGTTTTTTTTTTCTTTGTTTGTTTCACCCCCTTTCTGCTCATAGAATAAGCAATTTTTGGTGCTGTAGACTGTGATATGTAGTGTTCAGATCTGGCCTGAACTCGGTAGTGATGCACTGATGCTCCTGGATGAGTGATTGTAAACTCTTAGTTTGGCTGCCATTGCCCAGTCTTTTGGCCTCTAAGACAAATGGTTATGACTTGTGAGTTGTGACTAGTAAATTTCCTTCTGTT]
[+] EMBL CB684564             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAAGACGTCTACCGTCAAGGATATTGGAATCAGAACAAAAATAATTACTGATTTGGTCACAAAACTTGCATTGGAAAGAGAACGACTTCATCAACAGATTTCGTTGTTGACAAAGAAAAACAAGATATTGGCTCAGAAGTGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCAAAAATGTTACTGGCAAAGATGTTGAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTCCTGATTTTTCTTCATCACAGACTAAGGCTGAGAAACCTGTAGACCCTAGCAATGAGGAAGAGAAGACGAGGTCTTCAGAGGATGATGACTCTGGCGGGGAGGGCACTGCTGAGGCAGTCCGGACCATACAGCCGTCAGTGCTGAACTGGAAGTACATCACCGTGGCATTCCTGATCTTGTTAGTCGCTGTCTTCATATACTTGCCACTCCCAGAAGAAAGCAGCTCCGTTTGAAGAGGCCAATGCAATGATGGCTAATGTAGTCTGTAGTGTGTACACTATTTACATCCCTGTTTTTTTTTTCTTTGTTTGTTTCACCCCCTTTCTGCTCATAGAATAAGCAATTTTTGGTGCTGTAGACTGTGATATGTAGTGTTCAGATCTGGCCTGAACTCGGTAGTGATGCACTGATGCTCCTGGATGAGTGATTGTAAACTCTTAGTTTGGCTGCCATTGCCCAGTCTTTTGGCCTCTAAGACAAATGGTTATGACTTGTGAGTTG                       ]
[+] EMBL BQ907744             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTAAATTAGCGGAGGAAATAGTTCCTGATTTTTCTTCATCACAGACTAAGGCTGAGAAACCTGTAGACCCTAGCAATGAGGAAGAGAAGACGAGGTCTTCAGAGGATGATGACTCTGGCGGGGAGGGCACTGCTGAGGCAGTCCGGACCATACAGCCGTCAGTGCTGAACTGGAAGTACATCACCGTGGCATTCCTGATCTTGTTAGTCGCTGTCTTCATATACTTGCCACTCCCAGAAGAAAGCAGCTCCGTTTGAAGAGGCCAATGCAATGATGGCTAATGTAGTCTGTAGTGTGTACACTATTTACATCCCTGTTTTTTTTTTCTTTGTTTGTTTCACCCCCTTTCTGCTCATAGAATAAGC ATTTTTGGTGCTGTAGACTGTGATATGTAGTGTTCAGATCTGGCCTGAACTCGGTAGTGATGCACTGATGCTCCTGGATGAGTGATTGTAAACTCTTAGTTTGGCTGCCATTGCCCAGTCTTTTGGCCTCTAAGAC AATGGTTATGACTTGTGACTAGTaaaaaa                ]


>consensus_6548#0 GAGGCGAGGCAGAGGAGTGGAGCAGCATCCGAATCCGGCCACCTCATCATCTCGCCTCGC TTCCCGGCGGAGATCGCGAGGGCGACGGCGGCGGCGGCGGCAAGCTGCCTCCGACGAGCC CAGGCAGAAAAGGAGTTATGGATGTTGAGAACAGTATGGATGATGACCATTTCCAACAAA ACATGGGTAATGGAGATGGAATGAATGTAGAAGGAGGAAGTATGGAAATTATTACTAGAG TGGAACTTGAGCTTGCATTTGCCTCTGAGAAATTACTAAATCTAGAGATGTTGGTGATGG AGATAGCTCGCAAGGCTACTGATTTTGAGCCTCCTACATTGGAAGACGAATCTGTTTCTT CTGAAACTGCCGAGAGTGCTTTTGAATTGGACATCCTATATGGTTTTCTAGATGCAGAAG TAGGGGAGTTAGATGACATGATCAGTACTCTTGAGACTGATATTCAAAATGTTGAGCATA TGGTTTGTCAAGATGAATCTGGAGGCAAGATTAAAGCTAGGCTAGATGCTGCTATGGTGT CTTTAAAGCAGATGAAGGAATTAGTTTCTGATATCAGAAAAGAGTCAGCCAAGTTTGAGA AAGCCATAGAGTTTCCCCATGACAAAGAAGGCATTACTGGAGACGCTGGGTATGAAAATG GTATTGTGTCATCCCACACTAGCATGAGGACAGAGGATCAACGAAGAAATGTTTTGCAGA TGTTAGAACAATCGATAGCAAGTGAGCTGGATCTTGAAAAGAAGCTCTCTGAATCAAGAT GTATTATAGAAGAACTCAAACTAAAGCTCCATCATCATGATCAGGAAAAATATTTCCTGG AGGAATCTATCGAATCATTATGTGGGAAAACATTTGCAGCAGAAAACGCTTCTGAGGTAC TCTTGGGAACTTCAAAAGAACTTGTGGACAAAGTTAGTACCGTAGAGTGCCATCTAAGTG CATCAAGATGTAGGGAGGGTGATCTGGAGTCGAAGTTAGGAGAAAGCTTGATGGGATTAT CTTCACTGCAAGTCAACGCAGAGAATATTCAAGAAGGGAGTCAACATAGTGGAGGCACAG AAACTCATCCAAGTCCTGAATTGCCATCCTTGCAGGATAAGGTTAAGGAGCTAGAAAAAC AGTTGAGGGAATCTGATTCACAGTTGCAGTTGGCAAAGGCATCAGCAGAAACTTTTCAGG AGGAGCAGAATGTGCTGCATGCCGAGATAAGCACATTAGAAAACATTATTAAGAGTCTCA AAGAAGATGTCTCAAGAGCAGAAAGTAGAGCACAAAATGCTGAGTTAAGGTGCATGCAGC TAACTGAAGCTAACATAGAACTTAATGGGGAGCTAAACTCTCTTAAAAGTCATGGTTCAG AAAAGACTAGCCTTTTGGAGAGGAAACTTAAGGAGTCACATACCCAATTAGAGCATGCAA AGGCATCTCTTGATGCCACTGTTGAACAGCAGAGTATGCTGAGATCTACAATGTCGGACA TGGAACATATGATTGATGATCTGAAGGGAAAGGTTTTAAAAGCTGAAACCAGAGCAGAGA ATGCTGAATCTAAGTGTACATTGTTAACAGACACTAACTTAGAACTTAGTGAGGAGCTAT CGTTTCTGAGGGGTCGAGCAGAAAGTCTAGAGAACTCATTACATGAAGCCAACCATGTTA AGATGTCTACCGTCAAGGATATTGGAATCAGAACAAAAATAATTACTGATTTGGTCACAA AACTTGCATTGGAAAGAGAACGACTTCATCAACAGATTTCGTTGTTGACAAAGAAAAACA AGATATTGGCTCAGAAGTGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCAAAAATG TTACTGGCAAAGATGTTGAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTCCTGATT TTTCTTCATCACAGACTAAGGCTGAGAAACCTGTAGACCCTAGCAATGAGGAAGAGAAGA CGAGGTCTTCAGAGGATGATGACTCTGGCGGGGAGGGCACTGCTGAGGCAGTCCGGACCA TACAGCCGTCAGTGCTGAACTGGAAGTACATCACCGTGGCATTCCTGATCTTGTTAGTCG CTGTCTTCATATACTTGCCACTCCCAGAAGAAAGCAGCTCCGTTTGAAGAGGCCAATGCA ATGATGGCTAATGTAGTCTGTAGTGTGTACACTATTTACATCCCTGTTTTTTTTTTCTTT GTTTGTTTCACCCCCTTTCTGCTCATAGAATAAGCAATTTTTGGTGCTGTAGACTGTGAT ATGTAGTGTTCAGATCTGGCCTGAACTCGGTAGTGATGCACTGATGCTCCTGGATGAGTG ATTGTAAACTCTTAGTTTGGCTGCCATTGCCCAGTCTTTTGGCCTCTAAGACAAATGGTT ATGACTTGTGAGTTGTGACTAGTAAATTTCCTTCTGTT



consensusID : consensus_6548#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 874
fasta sequence
                              [CCTAGCTTTAGTGCATCAAAGTTCAAAGATCTGCATGTACCTTTTGAATGTAAACAGAAAATCTAAAACTTTGTGGTGAAAAAAAGCTGACATGATACTATTTTCATGGTGTGTTTTGTTTTCCAATTCAAGCAATGGTAAGTGTTTTGGATTATTTTAGGAAGGAAAACTTTCGTATGACTCGTGCTACACTAAATACAGTGTGAACTCATATTCTACCAAATCTGAATTAATCTATGTTAAGCAGTAAGTTGAACTGTTGCTGTTCCATATTTATTTGATGATTTCTTTTCTGATGGCTCCAGATTTCGTTGTTGACAAAGAAAAACAAGATATTGGCTCAGAAGTGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCAAAAATGTTACTGGCAAAGATGTTGAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTCCTGATTTTTCTTCATCACAGACTAAGGTGAAAATTATCTTTAGTTGATTCTCTTTTTCATACTGTACAAAAAAGGTATAAATTGCTGCTGCTTGGTCGACATCATCCACAACTATTTGATACTCATGCCATTAGTAAGTTAACATTTGCTGTGGTGAAGTAATTAGGTCTAGCTTGGGTTTGGGCTGAACCTGCCAATTTAAGTTTGTGGGTTAGGTTGAGCTTTGTGTAAGATGGCCAGATTGGGCTCAACCTCTCANGTACGACTTGGGGTTGGGTCAGCAACTAAAAGNCCAAGTACCCATTGGGTAGTAACTACACTTTCGTAGTATGTACTCTAGTCAGTCAATCTCTCATTCATAGTAAGGACNCATTTGTATGTACTCNAGTCAGNCTATCTCANTACCTTTTAAAAAATNGGGNAGNAAAAC]

[+] EMBL CB096397             [CCTAGCTTTAGTGCATCAAAGTTCAAAGATCTGCATGTACCTTTTGAATGTAAACAGAAAATCTAAAACTTTGTGGTGAAAAAAAGCTGACATGATACTATTTTCATGGTGTGTTTTGTTTTCCAATTCAAGCAATGGTAAGTGTTTTGGATTATTTTAGGAAGGAAAACTTTCGTATGACTCGTGCTACACTAAATACAGTGTGAACTCATATTCTACCAAATCTGAATTAATCTATGTTAAGCAGTAAGTTGAACTGTTGCTGTTCCATATTTATTTGATGATTTCTTTTCTGATGGCTCCAGATTTCGTTGTTGACAAAGAAAAACAAGATATTGGCTCAGAAGTGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCAAAAATGTTACTGGCAAAGATGTTGAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTCCTGATTTTTCTTCATCACAGACTAAGGTGAAAATTATCTTTAGTTGATTCTCTTTTTCATACTGTACAAAAAAGGTATAAATTGCTGCTGCTTGGTCGACATCATCCACAACTATTTGATACTCATGCCATTAGTAAGTTAACATTTGCTGTGGTGAAGTAATTAGGTCTAGCTTGGGTTTGGGCTGAACCTGCCAATTTAAGTTTGTGGGTTAGGTTGAGCTTTGTGTAAGATGGCCAGATTGGGCTCAACCTCTCANGTACGACTTGGGGTTGGGTCAGCAACTAAAAGNCCAAGTACCCATTGGGTAGTAACTACACTTTCGTAGTATGTACTCTAGTCAGTCAATCTCTCATTCATAGTAAGGACNCATTTGTATGTACTCNAGTCAGNCTATCTCANTACCTTTTAAAAAATNGGGNAGNAAAAC]


>consensus_6548#1 CCTAGCTTTAGTGCATCAAAGTTCAAAGATCTGCATGTACCTTTTGAATGTAAACAGAAA ATCTAAAACTTTGTGGTGAAAAAAAGCTGACATGATACTATTTTCATGGTGTGTTTTGTT TTCCAATTCAAGCAATGGTAAGTGTTTTGGATTATTTTAGGAAGGAAAACTTTCGTATGA CTCGTGCTACACTAAATACAGTGTGAACTCATATTCTACCAAATCTGAATTAATCTATGT TAAGCAGTAAGTTGAACTGTTGCTGTTCCATATTTATTTGATGATTTCTTTTCTGATGGC TCCAGATTTCGTTGTTGACAAAGAAAAACAAGATATTGGCTCAGAAGTGCAAAGGAAGTG TTAAGGATGACACTCAATTGAGCAAAAATGTTACTGGCAAAGATGTTGAGCTTCATTCTA CTAAATTAGCGGAGGAAATAGTTCCTGATTTTTCTTCATCACAGACTAAGGTGAAAATTA TCTTTAGTTGATTCTCTTTTTCATACTGTACAAAAAAGGTATAAATTGCTGCTGCTTGGT CGACATCATCCACAACTATTTGATACTCATGCCATTAGTAAGTTAACATTTGCTGTGGTG AAGTAATTAGGTCTAGCTTGGGTTTGGGCTGAACCTGCCAATTTAAGTTTGTGGGTTAGG TTGAGCTTTGTGTAAGATGGCCAGATTGGGCTCAACCTCTCANGTACGACTTGGGGTTGG GTCAGCAACTAAAAGNCCAAGTACCCATTGGGTAGTAACTACACTTTCGTAGTATGTACT CTAGTCAGTCAATCTCTCATTCATAGTAAGGACNCATTTGTATGTACTCNAGTCAGNCTA TCTCANTACCTTTTAAAAAATNGGGNAGNAAAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6548#0      GAGGCGAGGCAGAGGAGTGGAGCAGCATCCGAATCCGGCCACCTCATCATCTCGCCTCGC 60
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      TTCCCGGCGGAGATCGCGAGGGCGACGGCGGCGGCGGCGGCAAGCTGCCTCCGACGAGCC 120
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      CAGGCAGAAAAGGAGTTATGGATGTTGAGAACAGTATGGATGATGACCATTTCCAACAAA 180
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      ACATGGGTAATGGAGATGGAATGAATGTAGAAGGAGGAAGTATGGAAATTATTACTAGAG 240
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      TGGAACTTGAGCTTGCATTTGCCTCTGAGAAATTACTAAATCTAGAGATGTTGGTGATGG 300
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      AGATAGCTCGCAAGGCTACTGATTTTGAGCCTCCTACATTGGAAGACGAATCTGTTTCTT 360
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      CTGAAACTGCCGAGAGTGCTTTTGAATTGGACATCCTATATGGTTTTCTAGATGCAGAAG 420
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      TAGGGGAGTTAGATGACATGATCAGTACTCTTGAGACTGATATTCAAAATGTTGAGCATA 480
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      TGGTTTGTCAAGATGAATCTGGAGGCAAGATTAAAGCTAGGCTAGATGCTGCTATGGTGT 540
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      CTTTAAAGCAGATGAAGGAATTAGTTTCTGATATCAGAAAAGAGTCAGCCAAGTTTGAGA 600
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      AAGCCATAGAGTTTCCCCATGACAAAGAAGGCATTACTGGAGACGCTGGGTATGAAAATG 660
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      GTATTGTGTCATCCCACACTAGCATGAGGACAGAGGATCAACGAAGAAATGTTTTGCAGA 720
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      TGTTAGAACAATCGATAGCAAGTGAGCTGGATCTTGAAAAGAAGCTCTCTGAATCAAGAT 780
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      GTATTATAGAAGAACTCAAACTAAAGCTCCATCATCATGATCAGGAAAAATATTTCCTGG 840
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      AGGAATCTATCGAATCATTATGTGGGAAAACATTTGCAGCAGAAAACGCTTCTGAGGTAC 900
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      TCTTGGGAACTTCAAAAGAACTTGTGGACAAAGTTAGTACCGTAGAGTGCCATCTAAGTG 960
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      CATCAAGATGTAGGGAGGGTGATCTGGAGTCGAAGTTAGGAGAAAGCTTGATGGGATTAT 1020
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      CTTCACTGCAAGTCAACGCAGAGAATATTCAAGAAGGGAGTCAACATAGTGGAGGCACAG 1080
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      AAACTCATCCAAGTCCTGAATTGCCATCCTTGCAGGATAAGGTTAAGGAGCTAGAAAAAC 1140
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      AGTTGAGGGAATCTGATTCACAGTTGCAGTTGGCAAAGGCATCAGCAGAAACTTTTCAGG 1200
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      AGGAGCAGAATGTGCTGCATGCCGAGATAAGCACATTAGAAAACATTATTAAGAGTCTCA 1260
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      AAGAAGATGTCTCAAGAGCAGAAAGTAGAGCACAAAATGCTGAGTTAAGGTGCATGCAGC 1320
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      TAACTGAAGCTAACATAGAACTTAATGGGGAGCTAAACTCTCTTAAAAGTCATGGTTCAG 1380
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      AAAAGACTAGCCTTTTGGAGAGGAAACTTAAGGAGTCACATACCCAATTAGAGCATGCAA 1440
consensus_6548#1      ------------------------------------------------------------
                                                                                  

consensus_6548#0      AGGCATCTCTTGATGCCACTGTTGAACAGCAGAGTATGCTGAGATCTACAATGTCGGACA 1500
consensus_6548#1      ---------------------CCTAGCTTTAGTGCAT-CAAAGTTCAAAGATCT---GCA 35
                                              * *   ** * ** *  ** ** *  ** *    **

consensus_6548#0      TGGAACATATGATTGATGATCTGAAGGGAAAGGTTTTAAAAGCTGAAACCAGAGCAGAGA 1560
consensus_6548#1      TGTACCTTTTGAATG-TAAACAGAAAATCTAAAACTTTGTGGTGAAAAAAAGCTGACATG 94
                      ** * * * *** ** * * * ***     *    **    *   ***  **   * *  

consensus_6548#0      ATGCTGAATCTA-AGTGTACATTGTTAACAGACACTAACTTAGAACTTAGTGAGGAGCTA 1619
consensus_6548#1      ATACTATTTTCATGGTGTGTTTTGTT------TTCCAATTCAAGCAATGGTAAGTGTTTT 148
                      ** **   *  *  ****   *****        * ** * *     * ** **    * 

consensus_6548#0      TCGTTTCTGAGGGGTCGAGCAGAAAGTCTAGAGAACTCATTACATGAAGCCAACCATGTT 1679
consensus_6548#1      GGATTATTTTAGGA---AGGAAAACTTTCGTATGACTCGTGCTACACTAAATACAGTGTG 205
                         **  *   **    ** * **  *    *  **** *   *        **  *** 

consensus_6548#0      AAGATGTCTACCGTCAAGGATATTGGAATCAGAACAAA--AATAATTACTGATTTGGTCA 1737
consensus_6548#1      AACTCATATTCTACCAAATCTGAATTAATCTATGTTAAGCAGTAAGTTGAACTGTTGCTG 265
                      **    * * *   ***   *     ****      **  * *** *     * * *   

consensus_6548#0      CAAAACTTGCATTGGAAAGAGAACGACTTCAT--CAACAGATTTCGTTGTTGACAAAGAA 1795
consensus_6548#1      TTCCATATTTATTTGATGATTTCTTTTCTGATGGCTCCAGATTTCGTTGTTGACAAAGAA 325
                          *  *  *** **            * **  *  ***********************

consensus_6548#0      AAACAAGATATTGGCTCAGAAGTGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCAA 1855
consensus_6548#1      AAACAAGATATTGGCTCAGAAGTGCAAAGGAAGTGTTAAGGATGACACTCAATTGAGCAA 385
                      ************************************************************

consensus_6548#0      AAATGTTACTGGCAAAGATGTTGAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTCC 1915
consensus_6548#1      AAATGTTACTGGCAAAGATGTTGAGCTTCATTCTACTAAATTAGCGGAGGAAATAGTTCC 445
                      ************************************************************

consensus_6548#0      TGATTTTTCTTCATCACAGACTAAGGCTGAGAA-ACCTGTAG---ACCCTAGCAATGAGG 1971
consensus_6548#1      TGATTTTTCTTCATCACAGACTAAGGTGAAAATTATCTTTAGTTGATTCTCTTTTTCATA 505
                      **************************   * *  * ** ***   *  **     * *  

consensus_6548#0      AAGAGAAGACGAGGTCTTCAGAGGATGATGACTCTGGCGGGGAGGGCACTGCTGAGGCAG 2031
consensus_6548#1      CTGTACAAAAAAGGTAT----AAATTGCTG---CTGCTTGGTCGACATCATCCACAACTA 558
                        *   * *  **** *    *   ** **   ***   **  *    *  *     *  

consensus_6548#0      TCCGGACCATACAGCCGTCAGTGCTGAACTGGAAGTACATCACCGTGGCATTCCT-GATC 2090
consensus_6548#1      TTTGATACTCAT-GCCATTAGT----AAGTTAACATTTGCTGTGGTGAAGTAATTAGGTC 613
                      *  *   *  *  *** * ***    ** *  *  *        ***   *   * * **

consensus_6548#0      TTGTTAGTCGCTGTCTTCATATACTTGCCACTCCCAGAAGAAAGCAGCTCCGTTTGAAGA 2150
consensus_6548#1      TAGCTTGGGTTTGGGCTGA---ACCTGCCAATTT---AAGTTTGTGGGTTAGGTTGA--- 664
                      * * * *    **   * *   ** ***** *     ***   *  * *  * ****   

consensus_6548#0      GGCCAATGCAATGATGGCTAATGTAGTCTGTAGTGTGTACACTATTTACATCCCTGTTTT 2210
consensus_6548#1      GCTTTGTGTAA-GATGGCCAGATTGGGCT-CAACCTCT----CANGTACGACTTGGGGTT 718
                      *     ** ** ****** *   * * **  *   * *     *  ***  *   *  **

consensus_6548#0      TTTTTTCTTTGTTTGTTTCACCCCCTTTCTGCTCATAGAATAAGCAATTTTTGGTGCTGT 2270
consensus_6548#1      GGG--TCAGCAACTAAAAGNCCAAGTACCCA-TTGGGTAGTAACTACACTTTCGTAGTAT 775
                           **      *      **   *  *   *     * ***  *   *** **  * *

consensus_6548#0      AGACTGTGATATGTAGTGTTCAGATC--TGGCCTGAACTCGGTAGTGATGCACTGATGCT 2328
consensus_6548#1      GTACTCTAGTCAGTCAATCTCTCATTCATAGTAAGGACNCATTTGT-ATGTACTCNAGT- 833
                        *** *  *  **     **  **   * *   * ** *  * ** *** ***   *  

consensus_6548#0      CCTGGATGAGTGATTGTAAACTCTTAGTTTGGCTGCCATTGCCCAGTCTTTTGGCCTCTA 2388
consensus_6548#1      -CAGNCTATCTCANTACCTTTTAAAAAATNGGGNAGNAAAAC------------------ 874
                       * *  *   * * *      *   *  * **     *   *                  

consensus_6548#0      AGACAAATGGTTATGACTTGTGAGTTGTGACTAGTAAATTTCCTTCTGTT 2438
consensus_6548#1      --------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)