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Oryza sativa
cluster # 6580 cluster # 6580       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6580#0 length = 2508 sequences # 4  
consensusID : consensus_6580#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2508
fasta sequence 
                              [TCCTCCCGCCTCCCATGGCGACGGCCCCGCTCGCCTTCCACCTCCCATTCCCCTTCCCCTCCGCCTCCCGCCCGCCGCCTAGACTTCTACCCCCCTCACGCCGCCCTCCCGCCGCCCGCCTCGCCGCCACGCGCCGCTTCCGCCCGCCCACCGCCGACGACGAGCCCCCCGAGGCGGCGGAGGACTCCTCCCACGGCCTCAACCGCTACGACCAGCTCACCCGCCACGTCGAGCGCGCCCGCCGGCGCCAGCAGGCCGAGCAGCCGGAGATCACCCCCGACCACCCGCTCTTCTCGTCCCCTCCTTCCTCCGGGGAGGCCGGCAGCTACGACCCCGACGACGAGTTCTTCGATGAGATCGACCGCGCGATTGCCGAGAAGCGGGAGGAGTTCACGCGGCGTGGGCTGATCAAGCCGTCCGCCCCGGCGCCCTCGCAGCCCGAGGAGGAGGACGGCCTCGCCGACGAGCTCTCCCCCGAAGAGGTCATCGACCTCGACGAGATTCGGAGGCTGCAGGGACTCAGTGTCGTGTCCCTGGCCGACGAGGAGGACGAGGAGGCGAACGGCGGCGGTGGCGGGGTGGATTACGGCGACGACGGGGTGCCCCTCGACGACGACGGCGAGGTGTTCGATGTGGCCGATGAGGTCGGCCTCGAGGGGGCGAGGGTGCGGTACCCGGCCTTCCGCATGACGCTGGCCGAGCTCCTGGACGAGAGCAAGCTCGTGCCCGTGGCGGTGACCGGCGACCAGGATGTCGCGCTCGCCGGGGTGCAGCGTGACGCCAGCCTCGTCGCGGCGGGGGACCTCTACGTGTGCGTTGGGGAGGAAGGGCTTGCTGGGCTCACCGAAGCTGACAAGCGCGGGGCGGTCGCCGTCGTCGCCGACCAGACCGTCGACATCGAGGGCACCCTTGCTTGCCGCGCGCTGGTCATCGTCGATGACATCACGGCAGCTCTCCGCATGCTCCCCGCCTGCCTCTACAGGCGGCCTTCGAAAGACTTGGCGGTGATCGGTGTCGCTGGCACGGATGGGGTCACCACCACGGCGCACCTCGTCAGGGCAATGTATGAAGCCATGGGTGTGAGGACTGGCATGGTAGGCGTTCTCGGGGCCTATGCGTTTGGCAACAACAAACTGGACGCACAACCTGATGCCTCTGGTGACCCCATTGCCGTGCAGAGGCTGATGGCGACGATGTTGTACAATGGCGCTGAGGCGGCTTTGTTGGAGGCAACCACCGATGGTATGCCGTCATCTGGTGTGGACAGCGAGATAGATTATGACATTGCTGTGCTGACTAATGTTAGGCATGCCGGCGATGAGGCTGGCATGACCTACGAGGAGTACATGAACAGCATGGCCTCTCTGTTTTCTAGAATGGTTGACCCTGAGCGCCATCGTAAGGTGGTGAACATTGATGATCCAAGTGCTCCATTCTTTGCTGCACAGGGAGGGCAAGATGTTCCTGTGGTGACATATTCATTTGAGAACAAGAAGGCTGATGTGCACACTCTGAAGTATCAGCTTTCCCTGTTTGAAACGGAGGTCCTGGTACAGACACCACATGGGATCCTCGAGATTTCGTCAGGCCTTCTTGGGAGGGACAACATCTATAACATCCTTGCATCTGTAGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCATCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGATGAGGAGCAAGCATTTGGGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTTGGATGGTGTAAAGGAACTGGGCCCACGTCGAATTGTCACAGTTATTGGATGTTGTGGTGAGCGAGAAAGAGGGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACATCCGACAACCCAGCAAATGAAGATCCATTGGATATCCTGGATGATATGCTGGCGGGAGTAGGGTGGA-CCATGGAAGAATACTTGAAGCAT-GGCACAAATGATTATTACCCACCACTGCCGAATGGACATAGGATATTCCTAC--ATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGTCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGATTCTGA-TGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCAAGGAGCAGCATTTTAGATTCTCCCTTTTTGCTATGGTAGGATGTACTTCAGACCAGCGGGTGCTCAAGGTTGACTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGTAGGTACAAAATATATGCAATGCAGCTTCCCCTTAATTTCTGCGCCCAAAAAAAAAA]

[+] EMBL AK067162             [TCCTCCCGCCTCCCATGGCGACGGCCCCGCTCGCCTTCCACCTCCCATTCCCCTTCCCCTCCGCCTCCCGCCCGCCGCCTAGACTTCTACCCCCCTCACGCCGCCCTCCCGCCGCCCGCCTCGCCGCCACGCGCCGCTTCCGCCCGCCCACCGCCGACGACGAGCCCCCCGAGGCGGCGGAGGACTCCTCCCACGGCCTCAACCGCTACGACCAGCTCACCCGCCACGTCGAGCGCGCCCGCCGGCGCCAGCAGGCCGAGCAGCCGGAGATCACCCCCGACCACCCGCTCTTCTCGTCCCCTCCTTCCTCCGGGGAGGCCGGCAGCTACGACCCCGACGACGAGTTCTTCGATGAGATCGACCGCGCGATTGCCGAGAAGCGGGAGGAGTTCACGCGGCGTGGGCTGATCAAGCCGTCCGCCCCGGCGCCCTCGCAGCCCGAGGAGGAGGACGGCCTCGCCGACGAGCTCTCCCCCGAAGAGGTCATCGACCTCGACGAGATTCGGAGGCTGCAGGGACTCAGTGTCGTGTCCCTGGCCGACGAGGAGGACGAGGAGGCGAACGGCGGCGGTGGCGGGGTGGATTACGGCGACGACGGGGTGCCCCTCGACGACGACGGCGAGGTGTTCGATGTGGCCGATGAGGTCGGCCTCGAGGGGGCGAGGGTGCGGTACCCGGCCTTCCGCATGACGCTGGCCGAGCTCCTGGACGAGAGCAAGCTCGTGCCCGTGGCGGTGACCGGCGACCAGGATGTCGCGCTCGCCGGGGTGCAGCGTGACGCCAGCCTCGTCGCGGCGGGGGACCTCTACGTGTGCGTTGGGGAGGAAGGGCTTGCTGGGCTCACCGAAGCTGACAAGCGCGGGGCGGTCGCCGTCGTCGCCGACCAGACCGTCGACATCGAGGGCACCCTTGCTTGCCGCGCGCTGGTCATCGTCGATGACATCACGGCAGCTCTCCGCATGCTCCCCGCCTGCCTCTACAGGCGGCCTTCGAAAGACTTGGCGGTGATCGGTGTCGCTGGCACGGATGGGGTCACCACCACGGCGCACCTCGTCAGGGCAATGTATGAAGCCATGGGTGTGAGGACTGGCATGGTAGGCGTTCTCGGGGCCTATGCGTTTGGCAACAACAAACTGGACGCACAACCTGATGCCTCTGGTGACCCCATTGCCGTGCAGAGGCTGATGGCGACGATGTTGTACAATGGCGCTGAGGCGGCTTTGTTGGAGGCAACCACCGATGGTATGCCGTCATCTGGTGTGGACAGCGAGATAGATTATGACATTGCTGTGCTGACTAATGTTAGGCATGCCGGCGATGAGGCTGGCATGACCTACGAGGAGTACATGAACAGCATGGCCTCTCTGTTTTCTAGAATGGTTGACCCTGAGCGCCATCGTAAGGTGGTGAACATTGATGATCCAAGTGCTCCATTCTTTGCTGCACAGGGAGGGCAAGATGTTCCTGTGGTGACATATTCATTTGAGAACAAGAAGGCTGATGTGCACACTCTGAAGTATCAGCTTTCCCTGTTTGAAACGGAGGTCCTGGTACAGACACCACATGGGATCCTCGAGATTTCGTCAGGCCTTCTTGGGAGGGACAACATCTATAACATCCTTGCATCTGTAGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCATCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGATGAGGAGCAAGCATTTGGGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTTGGATGGTGTAAAGGAACTGGGCCCACGTCGAATTGTCACAGTTATTGGATGTTGTGGTGAGCGAGAAAGAGGGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACATCCGACAACCCAGCAAATGAAGATCCATTGGATATCCTGGATGATATGCTGGCGGGAGTAGGGTGGA CCATGGAAGAATACTTGAAGCAT GGCACAAATGATTATTACCCACCACTGCCGAATGGACATAGGATATTCCTAC  ATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGTCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGATTCTGA TGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCAAGGAGCAGCATTTTAGATTCTCCCTTTTTGCTATGGTAGGATGTACTTCAGACCAGCGGGTGCTCAAGGTTGACTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGTAGGTACAAAATATATGCAATGCAGCTTCCCCTTAAT                    ]
[+] EMBL CK085098             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGGCCTTCCGCATGACGCTGGCCGAGCTCCTGGACGAGAGCAAGCTCGTGCCCGTGGCGGTGACCGGCGACCAGGATGTCGCGCTCGCCGGGGTGCAGCGTGACGCCAGCCTCGTCGCGGCGGGGGACCTCTACGTGTGCGTTGGGGAGGAAGGGCTTGCTGGGCTCACCGAAGCTGACAAGCGCGGGGCGGTCGCCGTCGTCGCCGACCAGACCGTCGACATCGAGGGCACCCTTGCTTGCCGCGCGCTGGTCATCGTCGATGACATCACGGCAGCTCTCCGCATGCTCCCCGCCTGCCTCTACAGGCGGCCTTCGAAAGACATGGCGGTGATCGGTGTCGCTGGCACGGATGGGGTCACCACCACGGCGCACCTCGTCAGGGCAATGTATGAAGCCATGGGTGTGAGGACTGGCATGGTAGGCGTTCTCGGGGCCTATGCGTTTGGCAACAACAAACTGGACGCACAACCTGATGCCTCTGGTGACCCCATTGCCGTGCAGAGGCTGATGGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK058225             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACAATGGCGCTGAGGCGGCTTTGTTGGAGGCAACCACCGATGGTATGCCGTCATCTGGTGTGGACAGCGAGATAGATTATGACATTGCTGTGCTGACTAATGTTAGGCATGCCGGCGATGAGGCTGGCATGACCTACGAGGAGTACATGAACAGCATGGCCTCTCTGTTTTCTAGAATGGTTGACCCTGAGCGCCATCGTAAGGTGGTGAACATTGATGATCCAAGTGCTCCATTCTTTGCTGCACAGGGAGGGCAAGATGTTCCTGTGGTGACATATTCATTTGAGAACAAGAAGGCTGATGTGCACACTCTGAAGTATCAGCTTTCCCTGTTTGAAACGGAGGTCCTGGTACAGACACCACATGGGATCCTCGAGATTTCGTCAGGCCTTCTTGGGAGGGACAACATCTATAACATCCTTGCATCTGTAGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCATCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGATGAGGAGCAAGCATTTGGGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTTGGATGGTGTAAAGGAACTGGGCCCACGTCGAATTGTCACAGTTATTGGATGTTGTGGTGAGCGAGAAAGAGGGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACATCCGACAACCCAGCAAATGAAGATCCATTGGATATCCTGGATGATATGCTGGCGGGAGTAGGGTGGA CCATGGAAGAATACTTGAAGCAT GGCACAAATGATTATTACCCACCACTGCCGAATGGACATAGGATATTCCTAC  ATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGTCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGATTCTGA TGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCAAGGAGCAGCATTTTAGATTCTCCCTTTTTGCTATGGTAGGATGTACTTCAGACCAGCGGGTGCTCAAGGTTGGCTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGTAGGTACAAAATATATGCAATGCA                                 ]
[+] EMBL BM419459             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGATGATATGCT GCGGGATTAGGGTGGACCCATGGAAGAATACTTGAAGCATGGGCACAAATGATTATTACCCACCACTGCCGAANGGACATAGGATATTCCTACANATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGGCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATCCCGAGAAGCCTTACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGATTCTGAGTGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCAAGGAGCAGCATTTTAGATTCTCCCTTTTTGCTACGGTAGGATGTACTTCAGACCAGCGGGTGCTCAAGGTTGACTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGTAGGTAC AAATATATGCAATGCAGCTTCCCCTTAATTTCTGCGCCCAAAAAAAAAA]




>consensus_6580#0
TCCTCCCGCCTCCCATGGCGACGGCCCCGCTCGCCTTCCACCTCCCATTCCCCTTCCCCT
CCGCCTCCCGCCCGCCGCCTAGACTTCTACCCCCCTCACGCCGCCCTCCCGCCGCCCGCC
TCGCCGCCACGCGCCGCTTCCGCCCGCCCACCGCCGACGACGAGCCCCCCGAGGCGGCGG
AGGACTCCTCCCACGGCCTCAACCGCTACGACCAGCTCACCCGCCACGTCGAGCGCGCCC
GCCGGCGCCAGCAGGCCGAGCAGCCGGAGATCACCCCCGACCACCCGCTCTTCTCGTCCC
CTCCTTCCTCCGGGGAGGCCGGCAGCTACGACCCCGACGACGAGTTCTTCGATGAGATCG
ACCGCGCGATTGCCGAGAAGCGGGAGGAGTTCACGCGGCGTGGGCTGATCAAGCCGTCCG
CCCCGGCGCCCTCGCAGCCCGAGGAGGAGGACGGCCTCGCCGACGAGCTCTCCCCCGAAG
AGGTCATCGACCTCGACGAGATTCGGAGGCTGCAGGGACTCAGTGTCGTGTCCCTGGCCG
ACGAGGAGGACGAGGAGGCGAACGGCGGCGGTGGCGGGGTGGATTACGGCGACGACGGGG
TGCCCCTCGACGACGACGGCGAGGTGTTCGATGTGGCCGATGAGGTCGGCCTCGAGGGGG
CGAGGGTGCGGTACCCGGCCTTCCGCATGACGCTGGCCGAGCTCCTGGACGAGAGCAAGC
TCGTGCCCGTGGCGGTGACCGGCGACCAGGATGTCGCGCTCGCCGGGGTGCAGCGTGACG
CCAGCCTCGTCGCGGCGGGGGACCTCTACGTGTGCGTTGGGGAGGAAGGGCTTGCTGGGC
TCACCGAAGCTGACAAGCGCGGGGCGGTCGCCGTCGTCGCCGACCAGACCGTCGACATCG
AGGGCACCCTTGCTTGCCGCGCGCTGGTCATCGTCGATGACATCACGGCAGCTCTCCGCA
TGCTCCCCGCCTGCCTCTACAGGCGGCCTTCGAAAGACTTGGCGGTGATCGGTGTCGCTG
GCACGGATGGGGTCACCACCACGGCGCACCTCGTCAGGGCAATGTATGAAGCCATGGGTG
TGAGGACTGGCATGGTAGGCGTTCTCGGGGCCTATGCGTTTGGCAACAACAAACTGGACG
CACAACCTGATGCCTCTGGTGACCCCATTGCCGTGCAGAGGCTGATGGCGACGATGTTGT
ACAATGGCGCTGAGGCGGCTTTGTTGGAGGCAACCACCGATGGTATGCCGTCATCTGGTG
TGGACAGCGAGATAGATTATGACATTGCTGTGCTGACTAATGTTAGGCATGCCGGCGATG
AGGCTGGCATGACCTACGAGGAGTACATGAACAGCATGGCCTCTCTGTTTTCTAGAATGG
TTGACCCTGAGCGCCATCGTAAGGTGGTGAACATTGATGATCCAAGTGCTCCATTCTTTG
CTGCACAGGGAGGGCAAGATGTTCCTGTGGTGACATATTCATTTGAGAACAAGAAGGCTG
ATGTGCACACTCTGAAGTATCAGCTTTCCCTGTTTGAAACGGAGGTCCTGGTACAGACAC
CACATGGGATCCTCGAGATTTCGTCAGGCCTTCTTGGGAGGGACAACATCTATAACATCC
TTGCATCTGTAGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCA
TCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGATGAGGAGCAAGCATTTG
GGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTTGGATGGTGTAA
AGGAACTGGGCCCACGTCGAATTGTCACAGTTATTGGATGTTGTGGTGAGCGAGAAAGAG
GGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACAT
CCGACAACCCAGCAAATGAAGATCCATTGGATATCCTGGATGATATGCTGGCGGGAGTAG
GGTGGACCATGGAAGAATACTTGAAGCATGGCACAAATGATTATTACCCACCACTGCCGA
ATGGACATAGGATATTCCTACATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGA
TGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTG
AAGTCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATG
TTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAA
GCCACTGATTCTGATGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCAAGGAGCAG
CATTTTAGATTCTCCCTTTTTGCTATGGTAGGATGTACTTCAGACCAGCGGGTGCTCAAG
GTTGACTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGTAGGTACAA
AATATATGCAATGCAGCTTCCCCTTAATTTCTGCGCCCAAAAAAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)